Splice junction sequence |
GCATCAAGACCAACCATAAGGATTCGCATCTCCTTCTTGGCAAAAAGCCGGCTAAAAAGCTTTG CAAATGAAAGCCCCATTTTCCTTTTAACTGTTGATCtttgctagcaatgttgttggaaagccaa tccagaccttcatagagcccttcaccgctagttgcgcatgtgctttggatgtacctggtaagag agagagca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 560 Transcript exons: 3513351-3513432,3513525-3513643,3513730-3513849,3513935- 3514005,3514083-3514250 TTTGCTAGCAATGTTGTTGGAAAGCCAATCCAGACCTTCATAGAGCCCTTCACCGCTAGTTGCG CATGTGCTTTGGATGTACCAGTGGCGTTGCCGGAGTGAGTGAAGGCCAAGCTTATCAGTAATCT CAGCAGCATTCATAGCGTTTGGAAGATCCTGCTTGTTGGCAAACACAAGCAATACTGCATCCCG AAGCTCATCTTCATTCAACATCCTGTGAAGTTCATCTCTGGCTTCAACAACACGGTCTCTGTCA TTGCTATCAACAACAAATATCAGACCTTGAGTGTTTTGGAAGTAGTGTCTCCACAAGGGACGGA TCTTGTCCTGACCCCCGACATCCCAAACCGTGAAGCTGATGTTCTTGTACTCAACCGTCTCCAC ATTAAACCCGATGGTGGGAATGGTGGTGACAATCTCACCAAGCTTGAGCTTGTACAAAATGGTG GTCTTACCAGCAGCATCAAGACCAACCATAAGGATTCGCATCTCCTTCTTGGCAAAAAGCCGGC TAAAAAGCTTTGCAAATGAAAGCCCCATTTTCCTTTTAACTGTTGATC
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Genomic sequence |
TTTGCTAGCAATGTTGTTGGAAAGCCAATCCAGACCTTCATAGAGCCCTTCACCGCTAGTTGCG CATGTGCTTTGGATGTACCTGGTAAGAGAGAGAGCAAGCAACGTGTTTGTAAGTACCCATGTAT GCAATAGTAAGTAATAAATTCTGTCTGGGATAAAACTATAAATCACCAGTGGCGTTGCCGGAGT GAGTGAAGGCCAAGCTTATCAGTAATCTCAGCAGCATTCATAGCGTTTGGAAGATCCTGCTTGT TGGCAAACACAAGCAATACTGCATCCCGAAGCTCATCCTGCAGTTACGAAGCATCAATAGGAAA AAGCCATACGGATTACCAAGTCAAAATATTAACAAAATTGTGTAGCATTAAAAACATACTTCAT TCAACATCCTGTGAAGTTCATCTCTGGCTTCAACAACACGGTCTCTGTCATTGCTATCAACAAC AAATATCAGACCTTGAGTGTTTTGGAAGTAGTGTCTCCACAAGGGACGGATCTGTAAAATAGAA TAAGTGGATAACTGTTACTCTTTTCTTTTTAATCCTTTCAAAGAGAATCATATATAGTACAAAG TTACAAACCTTGTCCTGACCCCCGACATCCCAAACCGTGAAGCTGATGTTCTTGTACTCAACCG TCTCCACATTAAACCCTGTTTAAACAAATTATTTATCAAGTCTCATTGTCTAACCTAGTAAAAT TCCAATCAGTAGTTCTCAGAAGACTTACCGATGGTGGGAATGGTGGTGACAATCTCACCAAGCT TGAGCTTGTACAAAATGGTGGTCTTACCAGCAGCATCAAGACCAACCATAAGGATTCGCATCTC CTTCTTGGCAAAAAGCCGGCTAAAAAGCTTTGCAAATGAAAGCCCCATTTTCCTTTTAACTGTT GATC |