Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0729100_circ_g.2 |
ID in PlantcircBase | osa_circ_003762 |
Alias | Os01circ22588 |
Organism | Oryza sativa |
Position | chr1: 30400528-30405249 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os01g0729100 |
Parent gene annotation |
Protein of unknown function DUF92, transmembrane family protein. (Os01t0729100-01);Similar to uncharacterized conserved membrane protein. (Os01t0729100-02) |
Parent gene strand | + |
Alternative splicing | Os01g0729100_circ_g.1 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os01t0729100-02:4 Os01t0729100-01:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.316257062 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |