CircRNA Name |
AT2G06050_circ_g.2 |
ID in PlantcircBase |
ath_circ_012960 |
Alias |
Ath_circ_FC1173, Ath_circ_FC1174, AT2G06050_C1 |
Organism |
Arabidpsis thaliana |
Position |
chr2: 2360148-2361983 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ue-circRNA
|
Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, CIRI2 |
Parent gene |
AT2G06050 |
Parent gene annotation |
12-oxophytodienoate reductase 3 |
Parent gene strand |
- |
Alternative splicing |
AT2G06050_circ_g.3 AT2G06050_circ_g.4 |
Support reads |
1 |
Tissues |
whole_plant, leaf |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT2G06050.3:3 AT2G06050.1:3 AT2G06050.2:3
|