Detailed infomation of each circRNA
General Information | |
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CircRNA Name | POPTR_0007s02460_circ_g.1 |
ID in PlantcircBase | pop_circ_002096 |
Alias | Chr07:14106972-14107200 |
Organism | Populus trichocarpa |
Position | chr7: 1458396-1458624 JBrowse» |
Reference genome | Populus trichocarpa genome v3.0 |
Type | e-circRNA |
Identification method | CIRI2; circRNA_finder |
Parent gene | POPTR_0007s02460 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2 |
Tissues | leaf; cambium; xylem |
Exon boundary | No-No |
Splicing signals | TA-AG |
Number of exons covered | POPTR_0007s02460.1:1 |
Conservation Information | |
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Conserved circRNAs |
ghi_circ_001766 ghi_circ_001765 osa_circ_013251 gma_circ_009097 osa_circ_013248 osi_circ_012544 gma_circ_009092 |
PMCS | 0.854752402 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Song et al., 2020 |