Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023333_circ_g.1 |
ID in PlantcircBase | zma_circ_010140 |
Alias | Zm10circ00005, ZmciR449 |
Organism | Zea mays |
Position | chr10: 3607682-3608615 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d023333 |
Parent gene annotation |
Putative SET-domain containing protein family |
Parent gene strand | - |
Alternative splicing | Zm00001d023333_circ_g.2 |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d023333_T006:1 Zm00001d023333_T001:2 Zm00001d023333_T015:2 Zm00001d023333_T025:1 Zm00001d023333_T032:2 Zm00001d023333_T037:2 Zm00001d023333_T013:2 Zm00001d023333_T041:1 Zm00001d023333_T003:3 Zm00001d023333_T040:1 Zm00001d023333_T017:2 Zm00001d023333_T036:2 Zm00001d023333_T027:2 Zm00001d023333_T014:1 Zm00001d023333_T047:1 Zm00001d023333_T021:1 Zm00001d023333_T016:1 Zm00001d023333_T035:2 Zm00001d023333_T042:1 Zm00001d023333_T024:2 Zm00001d023333_T029:2 Zm00001d023333_T004:2 Zm00001d023333_T010:2 Zm00001d023333_T023:1 Zm00001d023333_T031:3 Zm00001d023333_T018:1 Zm00001d023333_T009:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.175771469 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Han et al., 2020;Zhang et al., 2019 |