Plant Circular RNA Database

Detail information of orai.005G116600_circ_g.3

			
						 General Information
					
						CircRNA Name
						orai.005G116600_circ_g.3
					
						ID in PlantcircBase
						gra_circ_000470
					
						Alias
						Chr05:23220429|23225050
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr05: 23220429-23225050  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.005G116600						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							orai.005G116600_circ_g.4 						
					
						Support reads
						4
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.005G116600.2:5
Gorai.005G116600.4:5
Gorai.005G116600.7:5
Gorai.005G116600.10:4
Gorai.005G116600.1:5
Gorai.005G116600.3:5
Gorai.005G116600.8:5
Gorai.005G116600.9:5
Gorai.005G116600.6:5
Gorai.005G116600.5:5

General Information
CircRNA Name	orai.005G116600_circ_g.3
ID in PlantcircBase	gra_circ_000470
Alias	Chr05:23220429\|23225050
Organism	Gossypium raimondii
Position	chrChr05: 23220429-23225050 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.005G116600
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	orai.005G116600_circ_g.4
Support reads	4
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.005G116600.2:5 Gorai.005G116600.4:5 Gorai.005G116600.7:5 Gorai.005G116600.10:4 Gorai.005G116600.1:5 Gorai.005G116600.3:5 Gorai.005G116600.8:5 Gorai.005G116600.9:5 Gorai.005G116600.6:5 Gorai.005G116600.5:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCCCTTTCCAGAAAATTAAAAGCATACTGGGGTAGAGCCTTGCAAATCAACTCTAGCTGCAAA
AAGTCCCGATGGTTGAAATTTTCTTCGATGCCAAACcgagtcaataatgctctgacagtaaata
ggactcatgtagtataacacatcatgagcagtagcgctcagcataactcgcaaaccccgcacac
catctagg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CGAGTCAATAATGCTCTGACAGTAAATAGGACTCATGTAGTATAACACATCATGAGCAGTAGCG
CTCAGCATAACTCGCAAACCCCGCACACCATCTAGGGTGATTTTGTCAACTGCAGCTTCCCCAC
TGAGCTTCAAGCCTTTTCTCCACTGAAACACAAAAGCCAGGTGAGGTACCACATAAAAGAACAT
CATAAAATAAAAGGAAGAAATGAAACTTTCATTTAAGTACAAAGGAAAAGAAAAGGAGTAAGAA
AGGGTTGCAGTTCAGCATGCTCAAAGGAGAGTAATGCTTTGTGCAAACTAAATAGCTAATACGG
CCAGGATGACAAACAAAGTATTTCTCTTAAATTGCCCATCATTACGGCTGTTGCATTTGATTTA
AAAAAATAAAAGTGGGGTGGCACATGTGAGCCTTGTAGGTTGGCATTTGAGATCTCTTTAATAC
CAATAAAAAATTTACAAGTCATGGTCTTTCACCTTCATCTATCATAAATGATGAAACCTTTGGT
CAGAACAAACAAAAGCATACTAAAAATTAATGATAGTAAATCGAAAATGTCAAAAGCAATCCTA
ACCAAATTACTCTGACAGAAAGGTCCTTCAAATTTGCATTTCATCATCATTTCTCCAAATTCAT
TAAGCAAATAAAAAAATTCTTCAAATGTTTCAACATGAAAAACTCAACATTCCACTATACTATT
TTGATACTCTTTTTAGTATTGTCTATGCACTCAACCAACTAAAATTTAAGTTCCAAACCAGAGA
AGTTTTTCATAATTGTAATGAAACAGTGAACTAGAACAACAATTTTGTAGCCAAAAAGTATTGA
TCAGGTTATGAATGTATACCCGCTAAAACAGCAGTGCATTACAAATTCATTTTTCAGATTCATC
TTTCTAATATTTCATTATTTTGGTTTCTGTAGTTCAAGGTAAAAACAGATAATTTTTTATTCAG
CAATAGCATTCATAGTGTTTCACTAAGTAACAGAATTAATAAATGAAAGAAATCAACTAAGAAA
TAAAGGATATTAAGAAAGAAACCAGAGAATATATCAGACTTTAACTCCTAAAATTACTTCTATT
GTCTTATAATATCTCCTAATAGCCTATTTTCCCACACTCCCCCTCAAATGGCAAATAGATATTC
TCCATTCCCAGCTTGGATGTGAACTTCTCAAAATCCAAGCTACTTAATCCGTTTGCAAGAATAT
CAACAACTAGGCCTCGAGCAGACATAAAAGAAATACAAATCAAACCACATTCCAGTTTCTCCTT
GGCTTTGTAACCCATGGCTAACATAACATGGGCAGACATAAAAGAAATACAAATCTAACCCTTG
GCTTTGTAACCCAAACCATGTCGGTGGTGATTGCTTAGGCCACAAAATGCCTTTCCAGGCTTAC
ACATAATATGGGTAGCCACCTTCTTTTCATACCTTGGAGGAATTTGCATATAAATTTCCTGCTC
AAGTTTTCATGCAAAAAAGCATTCTTAACATCAAATCGCTTCAATTTCTAACTGAAATACTTGG
TTAAGTGTAGGATTGACAGGCTGATTAGAAGAAGGATGGATTCTATGGATTTGATCTTTTTTCT
ATTTCCTAGCTTCCAAAACATGTATAAATACTTGGTTTCCGAGGTGGAATGATTATACAAACAA
TTCTTCCATATCTCTTTTGTATATAAATATGAATCCAGAAGATGCCAATCAATGTTATCAAGGG
TGCTAGGTGCACTGCAGGCGCTAAGACCTCTTATATAGCCTGAGGCCCAAGGTGCAAAAAAAGC
ACTCGCCCAAGTAAAATAAGGGGTGTAAATATGTGCAAATAATAATATATAATAACTAATAAGA
TAAATTTATAATTTTATAAATTCAAATTATTAAATCTCAAATAAAACCTGATATGTAATTAAAA
ATTGACAATAACTCTAAATTTCCTTTACTTCCATAATCCTTTTTTTGTCAAAATTCACTTCCAT
AATCTCTTGAATTGTTGTCCTTGCAATAAAATTTGGGCCACTTCCATTGTATTTGCTTGGCTTG
TTTTTCATCTATTTATCATTTAATATACAAACCACTCCTAGTGTCACAAATTTGAGCTTCTGCC
TTCTCCAAGTGTCTAATTTCAGTTTTCAAACATGCAAGGCGGCCGACACAAGCTTCCATGACAG
AGACAGATTACAAAAGTAATGAAAATAATTACAAGAAATTTTTGAAAACCAAAAACAGCATGAT
TTCTCCCCTGTTTTTAAACAACAGAAATATGCTTTAGGAGAGGGTAAATAAAAGAAGAACCGAG
AAAAAAGGGATTTGATTGTAAATTTAAACCTAATAAAAGCAGTGCTTGGGTTTATAATAATGGA
AATCAAGGAAAAAAAATATGGTATTTAACTTTCAAAATAAAGAAAAGATAAATAATAAAAAGAG
GAGGAAATTGCAAAATTAATTAAAGCTAGCTTTTTTGACACCTTGGACTGGAGCACAAGGCACA
ACAAGGCACTCGCCTGTTTGAAGATGCCTCACCTAGGAGGCTCTGAAGCGTTTTTATGTTTGTC
GCTGTGCCTGAGCACCAAGGCATGTGCCCTGACATCAGTGATGCCAATATAGGACTTTGCCAAA
CAAGGTCCCTTATAATTTGTATGAAAGGAACACTATAATGTTTAAAGGGAAGCAGATTGTCACA
TTATATTAAATAGTCAACTAATTCAATCAAGCTAAGCAGTCCTATCCATTCAAATTACACAAAT
CATCATCCAATAATACAGCTAGCAAGCAGCATAATAAAAATGATAAGAGAGAGAATGTGATAAT
AATGACAATTAAAATAATGATATAGAGCCTCATTCAAGTACAGAATATTTTTTGTACCACATAT
ACTATAAAAACTTTCTTAATAAGAAAAGCAACCAAACAGCCCAAGTGTAAAATCATTACAGACA
AACAAATAATTTTACCTGACATGGGATGAAAAGGACTCTCTGTTTGCGTCGTTGATGTGAAGTC
AGGTGTCGCTCAGCAAGGCTTGCTGTGATATGGCGAAAGTTGCCAACATCATCAACCAAATTAG
ATTTCTCCAACCTCTGACCAATACCATGGACCATAAAGACCAAGTGTCGAACAGGAACCTAGAT
CAAATTTAAACAGTCTTATTCTAAACTTCATTAAACAGAACAAGATCTGATATGTGCCCCACAT
GTACACTATTTGTACCAAAACCAGAATAGAGGAAGAGAAAAGTAATCAGGTTACAGTCCTTAAC
AAGATGCACAGGTAGAAGTTTAGGATTAAATTAAAAACAATTTGAAATTGTACACAAGCAACAA
ATCTACAATATGTTTTCATGTAAAATATCCATGACATCAAAGGTTTGCCAGCACAAAATTAAGC
ATATAGTGAAAAAGAAAATATTCCTCTATATTCTAGGCAATTGCTAATATCAAACCATGTAACT
ACTCATCGACTTAAAAAGTGTGCATTACATTAACAATTGGAAAATTTCAAGTAGACCACAATAA
ACAAAAATAAATAAATAAAGCGTAGTTGGATAATATACACAAAACCAAAATTCTAAGTACAATA
ATAAAATGCTAAATGATAGAAAAAGTTTATCCGTGGTAGTTTTTAGTCCAAGTCAATCCCCAAA
CAATGCATACTTTGGTATAGTACAACCAGCAACAAATTCATTTAAAGAAAAGCTGGGAACCATA
AGATTTGCAACAAGCAACATTTTATTTCAGTAAAGTAATTAAGACATAGAAAACCAGGCAAATA
TTAATGAGCAGCTTTAAATATGGGATGTCATGTTAGTAGAGAAGACTTGACTAGCCACATGGTG
TTGCTGTTGATTGCTAATATAGTAATAAAAAGCAACAAAAAGTAAGATGCCATGACTTTTTTAA
CTGAAATAATATTTCAATGCAGCAATTTTTCCCCAAAGCCAAATTTATAGTTTTTAAGAAATAT
TATGAAATTCCTTATATTTACAAAGTTCAGAAAGCATTAAGGAAAAACTAATATACATCTTACA
GAATCATGTTAGTGAAACACACAGACATTATGCAAGAAGCAAAATGCTCTAAAGCATACCTGAG
AACAATAATCGTCCATCTGTTCCTCTTTTCTTTGACGTAATTCATCCTACATAAAATAAAAATA
AAATAAAATATAAAAAAACACGTGTTAAAATGTCAAACACTGTTCCAAGTTCAGGCCCACTCAA
GAAATTTGAATATTAGCATATCTATCATTAAAGCATAGAATGTTTTGTGCCGTTAAAGCATAAG
AGCGGGAAAAGGAGAAAACCTGGGTTGGTTTGGGGGATTGAGAAGCAGAGTAACCACGTCTTAA
CTTGATTCCATTTCGACTGAAACTAATAACACCAGAAAAACCAGAAGCATCAACATTGAGCCAT
GCCTCCCAAGTATCATCTTCTCCAGTAAAAAGTGCATGAAGTCCCTGCATTCATTGTTAGACCT
GATAATTTAGGCATTACATAATACGATTTAAGTGAATATATTGTCCCTTTCCAGAAAATTAAAA
GCATACTGGGGTAGAGCCTTGCAAATCAACTCTAGCTGCAAAAAGTCCCGATGGTTGAAATTTT
CTTCGATGCCAAAC
						
					

			
		

Sequences
Splice junction sequence	GTCCCTTTCCAGAAAATTAAAAGCATACTGGGGTAGAGCCTTGCAAATCAACTCTAGCTGCAAA AAGTCCCGATGGTTGAAATTTTCTTCGATGCCAAACcgagtcaataatgctctgacagtaaata ggactcatgtagtataacacatcatgagcagtagcgctcagcataactcgcaaaccccgcacac catctagg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CGAGTCAATAATGCTCTGACAGTAAATAGGACTCATGTAGTATAACACATCATGAGCAGTAGCG CTCAGCATAACTCGCAAACCCCGCACACCATCTAGGGTGATTTTGTCAACTGCAGCTTCCCCAC TGAGCTTCAAGCCTTTTCTCCACTGAAACACAAAAGCCAGGTGAGGTACCACATAAAAGAACAT CATAAAATAAAAGGAAGAAATGAAACTTTCATTTAAGTACAAAGGAAAAGAAAAGGAGTAAGAA AGGGTTGCAGTTCAGCATGCTCAAAGGAGAGTAATGCTTTGTGCAAACTAAATAGCTAATACGG CCAGGATGACAAACAAAGTATTTCTCTTAAATTGCCCATCATTACGGCTGTTGCATTTGATTTA AAAAAATAAAAGTGGGGTGGCACATGTGAGCCTTGTAGGTTGGCATTTGAGATCTCTTTAATAC CAATAAAAAATTTACAAGTCATGGTCTTTCACCTTCATCTATCATAAATGATGAAACCTTTGGT CAGAACAAACAAAAGCATACTAAAAATTAATGATAGTAAATCGAAAATGTCAAAAGCAATCCTA ACCAAATTACTCTGACAGAAAGGTCCTTCAAATTTGCATTTCATCATCATTTCTCCAAATTCAT TAAGCAAATAAAAAAATTCTTCAAATGTTTCAACATGAAAAACTCAACATTCCACTATACTATT TTGATACTCTTTTTAGTATTGTCTATGCACTCAACCAACTAAAATTTAAGTTCCAAACCAGAGA AGTTTTTCATAATTGTAATGAAACAGTGAACTAGAACAACAATTTTGTAGCCAAAAAGTATTGA TCAGGTTATGAATGTATACCCGCTAAAACAGCAGTGCATTACAAATTCATTTTTCAGATTCATC TTTCTAATATTTCATTATTTTGGTTTCTGTAGTTCAAGGTAAAAACAGATAATTTTTTATTCAG CAATAGCATTCATAGTGTTTCACTAAGTAACAGAATTAATAAATGAAAGAAATCAACTAAGAAA TAAAGGATATTAAGAAAGAAACCAGAGAATATATCAGACTTTAACTCCTAAAATTACTTCTATT GTCTTATAATATCTCCTAATAGCCTATTTTCCCACACTCCCCCTCAAATGGCAAATAGATATTC TCCATTCCCAGCTTGGATGTGAACTTCTCAAAATCCAAGCTACTTAATCCGTTTGCAAGAATAT CAACAACTAGGCCTCGAGCAGACATAAAAGAAATACAAATCAAACCACATTCCAGTTTCTCCTT GGCTTTGTAACCCATGGCTAACATAACATGGGCAGACATAAAAGAAATACAAATCTAACCCTTG GCTTTGTAACCCAAACCATGTCGGTGGTGATTGCTTAGGCCACAAAATGCCTTTCCAGGCTTAC ACATAATATGGGTAGCCACCTTCTTTTCATACCTTGGAGGAATTTGCATATAAATTTCCTGCTC AAGTTTTCATGCAAAAAAGCATTCTTAACATCAAATCGCTTCAATTTCTAACTGAAATACTTGG TTAAGTGTAGGATTGACAGGCTGATTAGAAGAAGGATGGATTCTATGGATTTGATCTTTTTTCT ATTTCCTAGCTTCCAAAACATGTATAAATACTTGGTTTCCGAGGTGGAATGATTATACAAACAA TTCTTCCATATCTCTTTTGTATATAAATATGAATCCAGAAGATGCCAATCAATGTTATCAAGGG TGCTAGGTGCACTGCAGGCGCTAAGACCTCTTATATAGCCTGAGGCCCAAGGTGCAAAAAAAGC ACTCGCCCAAGTAAAATAAGGGGTGTAAATATGTGCAAATAATAATATATAATAACTAATAAGA TAAATTTATAATTTTATAAATTCAAATTATTAAATCTCAAATAAAACCTGATATGTAATTAAAA ATTGACAATAACTCTAAATTTCCTTTACTTCCATAATCCTTTTTTTGTCAAAATTCACTTCCAT AATCTCTTGAATTGTTGTCCTTGCAATAAAATTTGGGCCACTTCCATTGTATTTGCTTGGCTTG TTTTTCATCTATTTATCATTTAATATACAAACCACTCCTAGTGTCACAAATTTGAGCTTCTGCC TTCTCCAAGTGTCTAATTTCAGTTTTCAAACATGCAAGGCGGCCGACACAAGCTTCCATGACAG AGACAGATTACAAAAGTAATGAAAATAATTACAAGAAATTTTTGAAAACCAAAAACAGCATGAT TTCTCCCCTGTTTTTAAACAACAGAAATATGCTTTAGGAGAGGGTAAATAAAAGAAGAACCGAG AAAAAAGGGATTTGATTGTAAATTTAAACCTAATAAAAGCAGTGCTTGGGTTTATAATAATGGA AATCAAGGAAAAAAAATATGGTATTTAACTTTCAAAATAAAGAAAAGATAAATAATAAAAAGAG GAGGAAATTGCAAAATTAATTAAAGCTAGCTTTTTTGACACCTTGGACTGGAGCACAAGGCACA ACAAGGCACTCGCCTGTTTGAAGATGCCTCACCTAGGAGGCTCTGAAGCGTTTTTATGTTTGTC GCTGTGCCTGAGCACCAAGGCATGTGCCCTGACATCAGTGATGCCAATATAGGACTTTGCCAAA CAAGGTCCCTTATAATTTGTATGAAAGGAACACTATAATGTTTAAAGGGAAGCAGATTGTCACA TTATATTAAATAGTCAACTAATTCAATCAAGCTAAGCAGTCCTATCCATTCAAATTACACAAAT CATCATCCAATAATACAGCTAGCAAGCAGCATAATAAAAATGATAAGAGAGAGAATGTGATAAT AATGACAATTAAAATAATGATATAGAGCCTCATTCAAGTACAGAATATTTTTTGTACCACATAT ACTATAAAAACTTTCTTAATAAGAAAAGCAACCAAACAGCCCAAGTGTAAAATCATTACAGACA AACAAATAATTTTACCTGACATGGGATGAAAAGGACTCTCTGTTTGCGTCGTTGATGTGAAGTC AGGTGTCGCTCAGCAAGGCTTGCTGTGATATGGCGAAAGTTGCCAACATCATCAACCAAATTAG ATTTCTCCAACCTCTGACCAATACCATGGACCATAAAGACCAAGTGTCGAACAGGAACCTAGAT CAAATTTAAACAGTCTTATTCTAAACTTCATTAAACAGAACAAGATCTGATATGTGCCCCACAT GTACACTATTTGTACCAAAACCAGAATAGAGGAAGAGAAAAGTAATCAGGTTACAGTCCTTAAC AAGATGCACAGGTAGAAGTTTAGGATTAAATTAAAAACAATTTGAAATTGTACACAAGCAACAA ATCTACAATATGTTTTCATGTAAAATATCCATGACATCAAAGGTTTGCCAGCACAAAATTAAGC ATATAGTGAAAAAGAAAATATTCCTCTATATTCTAGGCAATTGCTAATATCAAACCATGTAACT ACTCATCGACTTAAAAAGTGTGCATTACATTAACAATTGGAAAATTTCAAGTAGACCACAATAA ACAAAAATAAATAAATAAAGCGTAGTTGGATAATATACACAAAACCAAAATTCTAAGTACAATA ATAAAATGCTAAATGATAGAAAAAGTTTATCCGTGGTAGTTTTTAGTCCAAGTCAATCCCCAAA CAATGCATACTTTGGTATAGTACAACCAGCAACAAATTCATTTAAAGAAAAGCTGGGAACCATA AGATTTGCAACAAGCAACATTTTATTTCAGTAAAGTAATTAAGACATAGAAAACCAGGCAAATA TTAATGAGCAGCTTTAAATATGGGATGTCATGTTAGTAGAGAAGACTTGACTAGCCACATGGTG TTGCTGTTGATTGCTAATATAGTAATAAAAAGCAACAAAAAGTAAGATGCCATGACTTTTTTAA CTGAAATAATATTTCAATGCAGCAATTTTTCCCCAAAGCCAAATTTATAGTTTTTAAGAAATAT TATGAAATTCCTTATATTTACAAAGTTCAGAAAGCATTAAGGAAAAACTAATATACATCTTACA GAATCATGTTAGTGAAACACACAGACATTATGCAAGAAGCAAAATGCTCTAAAGCATACCTGAG AACAATAATCGTCCATCTGTTCCTCTTTTCTTTGACGTAATTCATCCTACATAAAATAAAAATA AAATAAAATATAAAAAAACACGTGTTAAAATGTCAAACACTGTTCCAAGTTCAGGCCCACTCAA GAAATTTGAATATTAGCATATCTATCATTAAAGCATAGAATGTTTTGTGCCGTTAAAGCATAAG AGCGGGAAAAGGAGAAAACCTGGGTTGGTTTGGGGGATTGAGAAGCAGAGTAACCACGTCTTAA CTTGATTCCATTTCGACTGAAACTAATAACACCAGAAAAACCAGAAGCATCAACATTGAGCCAT GCCTCCCAAGTATCATCTTCTCCAGTAAAAAGTGCATGAAGTCCCTGCATTCATTGTTAGACCT GATAATTTAGGCATTACATAATACGATTTAAGTGAATATATTGTCCCTTTCCAGAAAATTAAAA GCATACTGGGGTAGAGCCTTGCAAATCAACTCTAGCTGCAAAAAGTCCCGATGGTTGAAATTTT CTTCGATGCCAAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.436171194

Conservation Information
Conserved circRNAs	NA
PMCS	0.436171194

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							23224541-23220431(-)
23224880-23220470(+)
						
						Potential amino acid sequence
						
							MDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTSHQRRKQRVLFIPCQ
WRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDSVWHRRKFQPSGLFA
ARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRGYSASQSPKPTQDEL
RQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTSHQRRKQR
VLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDSVWHRRKF
QPSGLFAARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRGYSASQSP
KPTQDELRQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTS
HQRRKQRVLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDS
VWHRRKFQPSGLFAARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRG
YSASQSPKPTQDELRQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASL
AERHLTSHQRRKQRVLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIY
CQSIIDS(-)
MKSWGRALQINSSCKKSRWLKFSSMPNRVNNALTVNRTHVV*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	23224541-23220431(-) 23224880-23220470(+)
Potential amino acid sequence	MDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTSHQRRKQRVLFIPCQ WRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDSVWHRRKFQPSGLFA ARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRGYSASQSPKPTQDEL RQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTSHQRRKQR VLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDSVWHRRKF QPSGLFAARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRGYSASQSP KPTQDELRQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAERHLTS HQRRKQRVLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIYCQSIIDS VWHRRKFQPSGLFAARVDLQGSTPGLHALFTGEDDTWEAWLNVDASGFSGVISFSRNGIKLRRG YSASQSPKPTQDELRQRKEEQMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASL AERHLTSHQRRKQRVLFIPCQWRKGLKLSGEAAVDKITLDGVRGLRVMLSATAHDVLYYMSPIY CQSIIDS(-) MKSWGRALQINSSCKKSRWLKFSSMPNRVNNALTVNRTHVV*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.005G116600_circ_g.3

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