Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d036888_circ_g.1 |
ID in PlantcircBase | zma_circ_002262 |
Alias | circ1056 |
Organism | Zea mays |
Position | chr6: 105648013-105650048 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d036888 |
Parent gene annotation |
D-aminoacyl-tRNA deacylase |
Parent gene strand | + |
Alternative splicing | Zm00001d036888_circ_g.2 Zm00001d036888_circ_g.3 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d036888_T005:3 Zm00001d036888_T004:4 Zm00001d036888_T002:4 Zm00001d036888_T003:4 Zm00001d036888_T006:3 Zm00001d036888_T001:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.121853987 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |