Plant Circular RNA Database

Detail information of Solyc01g073660.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc01g073660.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_000221
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr1: 81030953-81035948  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc01g073660.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc01g073660.2_circ_g.1 						
					
						Support reads
						16
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc01g073660.2.1:10

General Information
CircRNA Name	Solyc01g073660.2_circ_g.2
ID in PlantcircBase	sly_circ_000221
Alias	NA
Organism	Solanum lycopersicum
Position	chr1: 81030953-81035948 JBrowse»
Reference genome	SL2.50.38
Type	ue-circRNA
Identification method	CIRI
Parent gene	Solyc01g073660.2
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Solyc01g073660.2_circ_g.1
Support reads	16
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc01g073660.2.1:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTGAACACCTTCCAAGGGGTTTTGTCAATGATTCATCATCCTCACTATGATTAATCATAGTGCT
ATAGAAGTATTGGCAGTGCTTCGATGAATGGGAAACcattatcaaggcatttgctatgccaatg
aatatcgacaagatatacataaatgcgttcatgtttcttggaagcaggagtattcctatgccac
aaagtacc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CATTATCAAGGCATTTGCTATGCCAATGAATATCGACAAGATATACATAAATGCGTTCATGTTT
CTTGGAAGCAGGAGTATTCCTATGCCACAAAGTACCCAAAGGAGACCTCCTGCAGTATAAAAGC
CCTTCAATCGCTGGCTTGTCCACTTAATCTCCTGCATATAATTCAACTATCAGAGAAACAGACC
AGGCAAAAAAAAAGAGGCTCTGGAAAATTCAAAGATAGAACTGATCAAAAAAGTTCTGCTCTGT
ATGAACCTGTAGCAGGATGGATACAACGAAGCTGCAGACAAAGATGATTGCAGGGACCTATTTA
CATCAATTAAAGAAACAAGTATTAGTATTGTATTTCTTCCCTAGCCTCTCTTTAATAAAATGTC
TTTATTTGAAATGGAAACAATGCTCAGAAAGATACCAAAGCTTTTGAAGATAGACTCATCTGCA
GGTCATTGATCACATAGAAAGCAAGAAATGCCTGCAATGCAAACAATTACAACAAATCTATAGT
TGTAAAACCAAGTGAATGCTTAGGAAAAAGGATTCAAATGAAATCCATGTCATCAATGTAATAT
CTATTGAAAAGAGCTAATTTCAAAAGAAATAATACTCACCTGGGAGACATTAGTCACAAGTCTG
GTAAGCACGTAAACAAGAGCAACTTGGTGATATAAGATTTTCTTAAACCAATACATCCAAGAAA
TTCTAACATAACCTTTAACATGAGCTTCTAGTTTCAACCTGCACCAAGAAAGGCAAATGTTAAG
AGTGAACATCTAAGCAGAAAATTATCAAAAACTACCCCCTTAAACTGACAGCTCAAGGTACTTG
AAAGCAATCTCCCATTTCGAAGTTAGCATAGTTCTCGTACTTTTTCTATGTATCCCAGTTTATT
CTTCAGGATGGATTTTATTTTTCATCCGAGTTTTACACAAATGAAGCTATACTGTTATGCAGAA
AGAAAAGCTAAACAACTTTTATGAATGCCTAAGCTGGTTAAAGGTTAGAACCATCAAAACTCTC
AAACAAAGTGATTTTATCCCCAATTCATCCAAGCAATCAAAAAAATTGCAAACAATTGCATTTT
CATGAAAATTCAGTCCAAGCAACTGATGCAGTCAATGCATTCACTAAAAAATAGAGAAATAAGA
CATGTGCATACCTTGGCTCTCTTGTTCCGATAGCAAACACAACAACGAAGCAGCTTCCAATGAA
AATTGATGTATATGCAATCCAACGATACTGATTGTTCAAAAAGTAATGAGAACACAGCCAAAAG
AAAGTATTAGAACAAATAGAGTAACAACTGAAAAGTCACACACCTGATTTTCGACAGCAGCAGG
TGTCCCTGCTCCGACCATATTGAACACAACAAAAGCAACTGCGTATAAGCTAAGGTTTGCAACC
TTCAAATTCATCCCGTTCAAACAAATGTAGAACAAACCGAAAGTTAATGACTGCTCACATGTAA
AAGGAAATTTTGCATGAAATTATGGAGGAGATCACCAACCATTGTAAAAGCATTGCGGCAACTA
GCTAAAACTACTCTGCTTGTCGAGTTCAGTGTAATGCAGTTCACCATTGACCTACAGCAAGCAT
ATATGTTGTTAAGAAATTACAAAGAACTATCAGATAATCTTCGGGTTGTGCATGGTAAAATTTG
GGGGGGGGGGGGGTCATGTTCTAGAAGATTAAAGCTGTCCTTCTCAAGTTATTTCAATTTAATT
AAGTATTAGTGATCTATAAATTTGAGGTAAAGTTTAGCATTAGCAGAGAAATTACTTGTCTGAA
GGTGGTAACGTCAGATAATTATCAGGATCCTACATAGCTTCAGTGCGCAAAAGCAATGGTCACT
CTAGCTACATCAGTTGGAAGAATATGTGTGGTCTTACAGAAATTTGAGTGAGTGGCGGTGGAGG
AGGATCAAAGGAGATAGATATGGAATACAAGTTTCGTATTAAAGAATGAACAGATGTAGTTCGT
ATGGCACTGCTAGAGGAAACCATAAATAGACTGCAGACATTTTCCTGAGTTCACAAAACAGGGG
ATAAGCACTGGTGTCGTGATAGAAGTCCAGAAGCAAGCTATATTCACCAGCTTTATACAGGTTA
CTATCCATAGCAATCAGGAAGCCATGTAATGAAAGCAGGGAATAGAGTATCAAAGTCCAAGTCC
ATTGTACACATTGTCTATTTTGGCCCAACTGGCCTCACAACCGTCCCTTGGATAATTCACATCC
AGTCCAAAAGTACACTTACCATGTGAACACATCCTCTGTATTATAAAGTACTTTACTTTTCTCT
CCCTTTCCGATGTGATATTTGCCTAAGATGTTTTCTTGTGGGTTGGATTTGCCTTAGATGTGAA
TACACCACCTCATCGGAAGCTTGCTAGCATAGAATCCTGTCAGTCACTCCGTCGTGACAGTCAG
ATACAACCCCACACAAACTTAGCTTCCTCGTCTTAGGTTTGTCTACCATCCTATCATAGAAATC
CAGTTCTAATACTATATTTGTCAGGCCAAGCCACTAGTTTTATTGTTCGATTCGGGTCTATGTC
TGCACGACTTTAAAAACACAACACATTACTGCCTGGGTTGCTTTCTCATACACCCTACATATTC
CCCTTGTTTTGCCTATGTGAAATTTGTAGGGTGTTACAGAGCGGGATAGGGTACTTGACTTTAC
AATTTAGAGGTGTCGTCCAGGATTGTCGGATGGAGAGCCCAAGGAATTTCCAGTTTCATTGTAC
TCATCAAGCACATGGCAGAACCCTGTCATTCTTTTTTTCTATGACCATGGTGTCCGGGCCAACT
TTCACGCACCACGACTAATGTCCACCGGATACCTGCCACCTTCCACCAGCATCTGGTACCTCAG
TCCACCAAGGCTAGGACAAATGGAAAGATCAAGTAGTGTTTTTTGTCTCTGCTGAGTATCGAAC
CTGAGACCTCAGGGTCATTCTCAAAGAAAGATTACTATCCAGTCATATAGTTTACTGCAGCAAC
AGGAGAGTATTTCTTTTTGATGAACATGGAGAAAGATAACTTTTTTTAGGGGTGGAAAATACAT
GGATTGCCATTCACATTCTTATTGCTTATAACTTGAGGAGGAGAAGGAAGACATGAATTAGCTG
GGTTTTTTTTCTACAAAGGAAAGATGGAGGATCTAGATCTTTTACTTAGTCAAAGAAAACAGCC
CTCCAAATACTGGACTAATATGTTAATCGTGCCGTAAGAAGGTTTTCAGGAGTAAATGAGCTAA
CCTGGCAGTCTTATAATATTTAGAACAAGAAGATAGATAAGAGCAAACATTACATGTGCGATAC
TTGAGTAGCAGCCCATCCCACATTGAAGATTGCAGCGAACACACTGTAACCAATAGTTTGCAGC
ATGGCCGAATCAGAACCAATAAGTTTGCAAGGCAAGCAACCGCCAAACACTGAAGAAAATGAGA
CAGCAACCAAGAGAGATCCTGCAATATGCCATACTTTAAAATGCCCGAATCTGTCTATCTATCA
AGGTAGAACAACAAATATTAGTTAGAAGGTTCAATAATAAAGAAAAAAATAAAGGTATGCACTA
TTATCTGGGGATAAGAGGCGTAGTTGTTATTACTCCTGAAAAGATTATATGCTGTTCATGTCAA
AAATTACTTATTGCATTTAACTACCCAATATATTATAAAGAAATGACTGTATAATTATTATATT
TGGAATACTCATACAAGAAAAACTATACATTTTATAACAGACAAACATATGTTTAGATGAGAAA
TGGTGAAAATGGTAGAGCATGTTTTCATCTAGCAACGACTTCATGATCTCTTTTAGGAAATGAC
ATTATAATGTCTTAACATGTTTTTCTTAAGTCATCTAATCCACCTTCCAGGAAAATATAATAGA
TGCTTTAAAACTCAGTAGGTGATATAAGGACAAAGTTTAGGTAGTAGTTATGTTCTTGAGAAAT
ACCAGTTCCCCAGCAAATATAGTAGTCAATCCATCTGCAACTTGACCTGAGAGCATTACAACTG
CAGCATCACTGAGAAACAGACATGGTATACATGAATACACAACCAATTGCTTTACAAACTACGG
TATCCTATACAATACCCTTTTCTTTTGAGTTAAATTTGGAGGGGAGGACGGGGTAATGAAATGC
GAGGACATTGGAGTGTAGAAGTCACATGCTTGACAAATTGGGGAGAGTGTAGTAGTGGATAACA
CGAGGACGAAATTACAATATTAGAATTGAGATCCTGGTAGCGAGCCCTTTAAATGTCATTATAC
AATGTTAGTTACATCCGGCATGCTAACAGCAGCATGACAGGGCAGTGCTCAGTTCAATTCTCAA
ATGCCCATCTTGAGTGTTGTATCCCCAGTATAGGCTGGCTGCAGATACACCCTATGGTTGTACA
CAAAAAATGAAACCAGTCTTTCTATTTAACTAACTAGAAACCCTATGGTTGTATACAAAAAATG
AAACCAGTCTTTCTATTTAACTAACTAGAAGCTAAGCGCCTAGTACACTCCATTGAACTCATAA
CATTCACACAACACACTCTAAAGTACATAAAGTTGTTGTAAGCATTAACTCAAGAATTGTGAAA
AAGGTAGCCTATGTTAGATTGCTATAAGCAGACGAGCTACGTCAGAATACAGTAAAAGAGGTAC
ATGATAATTTAAAGATGCAGGTGCCACAAAGGGGTTTCTATCCTTTTTTGTCTTAATGCTAAAT
AGATTATTGAAAGACACATGCTCATCAGATTACCTAAGAGCAAGAAAATAATTGACAAACCTGG
GGGATAATCCAATATCTGTTAGAAAGACTAAGAGATAAGTGAACCAACAGGCTGAAGTTATGTC
GTTGAGCATGTGCCCAATGCCGTAATAAAAGACTGAACACCTTCCAAGGGGTTTTGTCAATGAT
TCATCATCCTCACTATGATTAATCATAGTGCTATAGAAGTATTGGCAGTGCTTCGATGAATGGG
AAAC
						
					

			
		

Sequences
Splice junction sequence	CTGAACACCTTCCAAGGGGTTTTGTCAATGATTCATCATCCTCACTATGATTAATCATAGTGCT ATAGAAGTATTGGCAGTGCTTCGATGAATGGGAAACcattatcaaggcatttgctatgccaatg aatatcgacaagatatacataaatgcgttcatgtttcttggaagcaggagtattcctatgccac aaagtacc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CATTATCAAGGCATTTGCTATGCCAATGAATATCGACAAGATATACATAAATGCGTTCATGTTT CTTGGAAGCAGGAGTATTCCTATGCCACAAAGTACCCAAAGGAGACCTCCTGCAGTATAAAAGC CCTTCAATCGCTGGCTTGTCCACTTAATCTCCTGCATATAATTCAACTATCAGAGAAACAGACC AGGCAAAAAAAAAGAGGCTCTGGAAAATTCAAAGATAGAACTGATCAAAAAAGTTCTGCTCTGT ATGAACCTGTAGCAGGATGGATACAACGAAGCTGCAGACAAAGATGATTGCAGGGACCTATTTA CATCAATTAAAGAAACAAGTATTAGTATTGTATTTCTTCCCTAGCCTCTCTTTAATAAAATGTC TTTATTTGAAATGGAAACAATGCTCAGAAAGATACCAAAGCTTTTGAAGATAGACTCATCTGCA GGTCATTGATCACATAGAAAGCAAGAAATGCCTGCAATGCAAACAATTACAACAAATCTATAGT TGTAAAACCAAGTGAATGCTTAGGAAAAAGGATTCAAATGAAATCCATGTCATCAATGTAATAT CTATTGAAAAGAGCTAATTTCAAAAGAAATAATACTCACCTGGGAGACATTAGTCACAAGTCTG GTAAGCACGTAAACAAGAGCAACTTGGTGATATAAGATTTTCTTAAACCAATACATCCAAGAAA TTCTAACATAACCTTTAACATGAGCTTCTAGTTTCAACCTGCACCAAGAAAGGCAAATGTTAAG AGTGAACATCTAAGCAGAAAATTATCAAAAACTACCCCCTTAAACTGACAGCTCAAGGTACTTG AAAGCAATCTCCCATTTCGAAGTTAGCATAGTTCTCGTACTTTTTCTATGTATCCCAGTTTATT CTTCAGGATGGATTTTATTTTTCATCCGAGTTTTACACAAATGAAGCTATACTGTTATGCAGAA AGAAAAGCTAAACAACTTTTATGAATGCCTAAGCTGGTTAAAGGTTAGAACCATCAAAACTCTC AAACAAAGTGATTTTATCCCCAATTCATCCAAGCAATCAAAAAAATTGCAAACAATTGCATTTT CATGAAAATTCAGTCCAAGCAACTGATGCAGTCAATGCATTCACTAAAAAATAGAGAAATAAGA CATGTGCATACCTTGGCTCTCTTGTTCCGATAGCAAACACAACAACGAAGCAGCTTCCAATGAA AATTGATGTATATGCAATCCAACGATACTGATTGTTCAAAAAGTAATGAGAACACAGCCAAAAG AAAGTATTAGAACAAATAGAGTAACAACTGAAAAGTCACACACCTGATTTTCGACAGCAGCAGG TGTCCCTGCTCCGACCATATTGAACACAACAAAAGCAACTGCGTATAAGCTAAGGTTTGCAACC TTCAAATTCATCCCGTTCAAACAAATGTAGAACAAACCGAAAGTTAATGACTGCTCACATGTAA AAGGAAATTTTGCATGAAATTATGGAGGAGATCACCAACCATTGTAAAAGCATTGCGGCAACTA GCTAAAACTACTCTGCTTGTCGAGTTCAGTGTAATGCAGTTCACCATTGACCTACAGCAAGCAT ATATGTTGTTAAGAAATTACAAAGAACTATCAGATAATCTTCGGGTTGTGCATGGTAAAATTTG GGGGGGGGGGGGGTCATGTTCTAGAAGATTAAAGCTGTCCTTCTCAAGTTATTTCAATTTAATT AAGTATTAGTGATCTATAAATTTGAGGTAAAGTTTAGCATTAGCAGAGAAATTACTTGTCTGAA GGTGGTAACGTCAGATAATTATCAGGATCCTACATAGCTTCAGTGCGCAAAAGCAATGGTCACT CTAGCTACATCAGTTGGAAGAATATGTGTGGTCTTACAGAAATTTGAGTGAGTGGCGGTGGAGG AGGATCAAAGGAGATAGATATGGAATACAAGTTTCGTATTAAAGAATGAACAGATGTAGTTCGT ATGGCACTGCTAGAGGAAACCATAAATAGACTGCAGACATTTTCCTGAGTTCACAAAACAGGGG ATAAGCACTGGTGTCGTGATAGAAGTCCAGAAGCAAGCTATATTCACCAGCTTTATACAGGTTA CTATCCATAGCAATCAGGAAGCCATGTAATGAAAGCAGGGAATAGAGTATCAAAGTCCAAGTCC ATTGTACACATTGTCTATTTTGGCCCAACTGGCCTCACAACCGTCCCTTGGATAATTCACATCC AGTCCAAAAGTACACTTACCATGTGAACACATCCTCTGTATTATAAAGTACTTTACTTTTCTCT CCCTTTCCGATGTGATATTTGCCTAAGATGTTTTCTTGTGGGTTGGATTTGCCTTAGATGTGAA TACACCACCTCATCGGAAGCTTGCTAGCATAGAATCCTGTCAGTCACTCCGTCGTGACAGTCAG ATACAACCCCACACAAACTTAGCTTCCTCGTCTTAGGTTTGTCTACCATCCTATCATAGAAATC CAGTTCTAATACTATATTTGTCAGGCCAAGCCACTAGTTTTATTGTTCGATTCGGGTCTATGTC TGCACGACTTTAAAAACACAACACATTACTGCCTGGGTTGCTTTCTCATACACCCTACATATTC CCCTTGTTTTGCCTATGTGAAATTTGTAGGGTGTTACAGAGCGGGATAGGGTACTTGACTTTAC AATTTAGAGGTGTCGTCCAGGATTGTCGGATGGAGAGCCCAAGGAATTTCCAGTTTCATTGTAC TCATCAAGCACATGGCAGAACCCTGTCATTCTTTTTTTCTATGACCATGGTGTCCGGGCCAACT TTCACGCACCACGACTAATGTCCACCGGATACCTGCCACCTTCCACCAGCATCTGGTACCTCAG TCCACCAAGGCTAGGACAAATGGAAAGATCAAGTAGTGTTTTTTGTCTCTGCTGAGTATCGAAC CTGAGACCTCAGGGTCATTCTCAAAGAAAGATTACTATCCAGTCATATAGTTTACTGCAGCAAC AGGAGAGTATTTCTTTTTGATGAACATGGAGAAAGATAACTTTTTTTAGGGGTGGAAAATACAT GGATTGCCATTCACATTCTTATTGCTTATAACTTGAGGAGGAGAAGGAAGACATGAATTAGCTG GGTTTTTTTTCTACAAAGGAAAGATGGAGGATCTAGATCTTTTACTTAGTCAAAGAAAACAGCC CTCCAAATACTGGACTAATATGTTAATCGTGCCGTAAGAAGGTTTTCAGGAGTAAATGAGCTAA CCTGGCAGTCTTATAATATTTAGAACAAGAAGATAGATAAGAGCAAACATTACATGTGCGATAC TTGAGTAGCAGCCCATCCCACATTGAAGATTGCAGCGAACACACTGTAACCAATAGTTTGCAGC ATGGCCGAATCAGAACCAATAAGTTTGCAAGGCAAGCAACCGCCAAACACTGAAGAAAATGAGA CAGCAACCAAGAGAGATCCTGCAATATGCCATACTTTAAAATGCCCGAATCTGTCTATCTATCA AGGTAGAACAACAAATATTAGTTAGAAGGTTCAATAATAAAGAAAAAAATAAAGGTATGCACTA TTATCTGGGGATAAGAGGCGTAGTTGTTATTACTCCTGAAAAGATTATATGCTGTTCATGTCAA AAATTACTTATTGCATTTAACTACCCAATATATTATAAAGAAATGACTGTATAATTATTATATT TGGAATACTCATACAAGAAAAACTATACATTTTATAACAGACAAACATATGTTTAGATGAGAAA TGGTGAAAATGGTAGAGCATGTTTTCATCTAGCAACGACTTCATGATCTCTTTTAGGAAATGAC ATTATAATGTCTTAACATGTTTTTCTTAAGTCATCTAATCCACCTTCCAGGAAAATATAATAGA TGCTTTAAAACTCAGTAGGTGATATAAGGACAAAGTTTAGGTAGTAGTTATGTTCTTGAGAAAT ACCAGTTCCCCAGCAAATATAGTAGTCAATCCATCTGCAACTTGACCTGAGAGCATTACAACTG CAGCATCACTGAGAAACAGACATGGTATACATGAATACACAACCAATTGCTTTACAAACTACGG TATCCTATACAATACCCTTTTCTTTTGAGTTAAATTTGGAGGGGAGGACGGGGTAATGAAATGC GAGGACATTGGAGTGTAGAAGTCACATGCTTGACAAATTGGGGAGAGTGTAGTAGTGGATAACA CGAGGACGAAATTACAATATTAGAATTGAGATCCTGGTAGCGAGCCCTTTAAATGTCATTATAC AATGTTAGTTACATCCGGCATGCTAACAGCAGCATGACAGGGCAGTGCTCAGTTCAATTCTCAA ATGCCCATCTTGAGTGTTGTATCCCCAGTATAGGCTGGCTGCAGATACACCCTATGGTTGTACA CAAAAAATGAAACCAGTCTTTCTATTTAACTAACTAGAAACCCTATGGTTGTATACAAAAAATG AAACCAGTCTTTCTATTTAACTAACTAGAAGCTAAGCGCCTAGTACACTCCATTGAACTCATAA CATTCACACAACACACTCTAAAGTACATAAAGTTGTTGTAAGCATTAACTCAAGAATTGTGAAA AAGGTAGCCTATGTTAGATTGCTATAAGCAGACGAGCTACGTCAGAATACAGTAAAAGAGGTAC ATGATAATTTAAAGATGCAGGTGCCACAAAGGGGTTTCTATCCTTTTTTGTCTTAATGCTAAAT AGATTATTGAAAGACACATGCTCATCAGATTACCTAAGAGCAAGAAAATAATTGACAAACCTGG GGGATAATCCAATATCTGTTAGAAAGACTAAGAGATAAGTGAACCAACAGGCTGAAGTTATGTC GTTGAGCATGTGCCCAATGCCGTAATAAAAGACTGAACACCTTCCAAGGGGTTTTGTCAATGAT TCATCATCCTCACTATGATTAATCATAGTGCTATAGAAGTATTGGCAGTGCTTCGATGAATGGG AAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.132721514

Conservation Information
Conserved circRNAs	NA
PMCS	0.132721514

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							81035941-81031217(+)
81035908-81030955(-)
						
					

						Potential amino acid sequence
						
							MGNHYQGICYANEYRQDIHKCVHVSWKQEYSYATKYPKETSCSIKALQSLACPLNLL*(+)
MINHSEDDESLTKPLGRCSVFYYGIGHMLNDITSACWFTYLLVFLTDIGLSPSDAAVVMLSGQV
ADGLTTIFAGELIDRFGHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAA
IFNVGWAATQVSHMSMVNCITLNSTSRVVLASCRNAFTMVANLSLYAVAFVVFNMVGAGTPAAV
ENQYRWIAYTSIFIGSCFVVVFAIGTREPRLKLEAHVKGYVRISWMYWFKKILYHQVALVYVLT
RLVTNVSQAFLAFYVINDLQMSLSSKALVPAIIFVCSFVVSILLQEIKWTSQRLKGFYTAGGLL
WVLCGIGILLLPRNMNAFMYILSIFIGIANALIMVSHSSKHCQYFYSTMINHSEDDESLTKPLG
RCSVFYYGIGHMLNDITSACWFTYLLVFLTDIGLSPSDAAVVMLSGQVADGLTTIFAGELIDRF
GHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAAIFNVGWAATQVSHMSM
VNCITLNSTSRVVLASCRNAFTMVANLSLYAVAFVVFNMVGAGTPAAVENQYRWIAYTSIFIGS
CFVVVFAIGTREPRLKLEAHVKGYVRISWMYWFKKILYHQVALVYVLTRLVTNVSQAFLAFYVI
NDLQMSLSSKALVPAIIFVCSFVVSILLQEIKWTSQRLKGFYTAGGLLWVLCGIGILLLPRNMN
AFMYILSIFIGIANALIMVSHSSKHCQYFYSTMINHSEDDESLTKPLGRCSVFYYGIGHMLNDI
TSACWFTYLLVFLTDIGLSPSDAAVVMLSGQVADGLTTIFAGELIDRFGHFKVWHIAGSLLVAV
SFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVLAS
CRNAFTMVANLSLYAVAFVVFNMVGAGTPAAVENQYRWIAYTSIFIGSCFVVVFAIGTREPRLK
LEAHVKGYVRISWMYWFKKILYHQVALVYVLTRLVTNVSQAFLAFYVINDLQMSLSSKALVPAI
IFVCSFVVSILLQEIKWTSQRLKGFYTAGGLLWVLCGIGILLLPRNMNAFMYILSIFIGIANAL
IMVSHSSKHCQYFYSTMINHSEDDESLTKPLGRCSVFYYGIGHMLNDITSACWFTYLLVFLTDI
GLSPSDAAVVMLSGQVADGLTTIFAGELIDRFGHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIG
SDSAMLQTIGYSVFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVLASCRNAFTMVANLSLYAV
AFVVFNMVGAGTPAAVENQYRWIAYTSIFIGSCFVVVFAIGTREPRLKLEAHVKGYVRISWMYW
FKKILYHQVALVYVLTRLVTNVSQAFLAFYVINDLQMSLSSKALVPAIIFVCSFVVSILLQEIK
WTSQRLKGFYTAGGLLWVLCGIGILLLPRNMNAFMYILSIFIGIANALIM(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	81035941-81031217(+) 81035908-81030955(-)
Potential amino acid sequence	MGNHYQGICYANEYRQDIHKCVHVSWKQEYSYATKYPKETSCSIKALQSLACPLNLL*(+) MINHSEDDESLTKPLGRCSVFYYGIGHMLNDITSACWFTYLLVFLTDIGLSPSDAAVVMLSGQV ADGLTTIFAGELIDRFGHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAA IFNVGWAATQVSHMSMVNCITLNSTSRVVLASCRNAFTMVANLSLYAVAFVVFNMVGAGTPAAV ENQYRWIAYTSIFIGSCFVVVFAIGTREPRLKLEAHVKGYVRISWMYWFKKILYHQVALVYVLT RLVTNVSQAFLAFYVINDLQMSLSSKALVPAIIFVCSFVVSILLQEIKWTSQRLKGFYTAGGLL WVLCGIGILLLPRNMNAFMYILSIFIGIANALIMVSHSSKHCQYFYSTMINHSEDDESLTKPLG RCSVFYYGIGHMLNDITSACWFTYLLVFLTDIGLSPSDAAVVMLSGQVADGLTTIFAGELIDRF GHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAAIFNVGWAATQVSHMSM VNCITLNSTSRVVLASCRNAFTMVANLSLYAVAFVVFNMVGAGTPAAVENQYRWIAYTSIFIGS CFVVVFAIGTREPRLKLEAHVKGYVRISWMYWFKKILYHQVALVYVLTRLVTNVSQAFLAFYVI NDLQMSLSSKALVPAIIFVCSFVVSILLQEIKWTSQRLKGFYTAGGLLWVLCGIGILLLPRNMN AFMYILSIFIGIANALIMVSHSSKHCQYFYSTMINHSEDDESLTKPLGRCSVFYYGIGHMLNDI TSACWFTYLLVFLTDIGLSPSDAAVVMLSGQVADGLTTIFAGELIDRFGHFKVWHIAGSLLVAV SFSSVFGGCLPCKLIGSDSAMLQTIGYSVFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVLAS CRNAFTMVANLSLYAVAFVVFNMVGAGTPAAVENQYRWIAYTSIFIGSCFVVVFAIGTREPRLK LEAHVKGYVRISWMYWFKKILYHQVALVYVLTRLVTNVSQAFLAFYVINDLQMSLSSKALVPAI IFVCSFVVSILLQEIKWTSQRLKGFYTAGGLLWVLCGIGILLLPRNMNAFMYILSIFIGIANAL IMVSHSSKHCQYFYSTMINHSEDDESLTKPLGRCSVFYYGIGHMLNDITSACWFTYLLVFLTDI GLSPSDAAVVMLSGQVADGLTTIFAGELIDRFGHFKVWHIAGSLLVAVSFSSVFGGCLPCKLIG SDSAMLQTIGYSVFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVLASCRNAFTMVANLSLYAV AFVVFNMVGAGTPAAVENQYRWIAYTSIFIGSCFVVVFAIGTREPRLKLEAHVKGYVRISWMYW FKKILYHQVALVYVLTRLVTNVSQAFLAFYVINDLQMSLSSKALVPAIIFVCSFVVSILLQEIK WTSQRLKGFYTAGGLLWVLCGIGILLLPRNMNAFMYILSIFIGIANALIM(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc01g073660.2_circ_g.2

Address

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