Plant Circular RNA Database

Detail information of Zm00001d003198_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d003198_circ_g.5
					
						ID in PlantcircBase
						zma_circ_007144
					
						Alias
						zma_circ_0001030, GRMZM2G052142_C4
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 35374558-35377987  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d003198						
					
						Parent gene annotation
						
							eIF-2-alpha kinase GCN2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d003198_circ_g.2 Zm00001d003198_circ_g.3 Zm00001d003198_circ_g.4 Zm00001d003198_circ_g.6 Zm00001d003198_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d003198_T031:5
Zm00001d003198_T035:5
Zm00001d003198_T002:3
Zm00001d003198_T022:5
Zm00001d003198_T021:5
Zm00001d003198_T025:5
Zm00001d003198_T012:3
Zm00001d003198_T018:5
Zm00001d003198_T034:5
Zm00001d003198_T003:5
Zm00001d003198_T030:3
Zm00001d003198_T014:5
Zm00001d003198_T008:5
Zm00001d003198_T010:5
Zm00001d003198_T033:5
Zm00001d003198_T017:1
Zm00001d003198_T001:5
Zm00001d003198_T013:5
Zm00001d003198_T004:5
Zm00001d003198_T011:5
Zm00001d003198_T027:5
Zm00001d003198_T036:5
Zm00001d003198_T029:5

General Information
CircRNA Name	Zm00001d003198_circ_g.5
ID in PlantcircBase	zma_circ_007144
Alias	zma_circ_0001030, GRMZM2G052142_C4
Organism	Zea mays
Position	chr2: 35374558-35377987 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d003198
Parent gene annotation	eIF-2-alpha kinase GCN2
Parent gene strand	-
Alternative splicing	Zm00001d003198_circ_g.2 Zm00001d003198_circ_g.3 Zm00001d003198_circ_g.4 Zm00001d003198_circ_g.6 Zm00001d003198_circ_g.7
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d003198_T031:5 Zm00001d003198_T035:5 Zm00001d003198_T002:3 Zm00001d003198_T022:5 Zm00001d003198_T021:5 Zm00001d003198_T025:5 Zm00001d003198_T012:3 Zm00001d003198_T018:5 Zm00001d003198_T034:5 Zm00001d003198_T003:5 Zm00001d003198_T030:3 Zm00001d003198_T014:5 Zm00001d003198_T008:5 Zm00001d003198_T010:5 Zm00001d003198_T033:5 Zm00001d003198_T017:1 Zm00001d003198_T001:5 Zm00001d003198_T013:5 Zm00001d003198_T004:5 Zm00001d003198_T011:5 Zm00001d003198_T027:5 Zm00001d003198_T036:5 Zm00001d003198_T029:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTGCGAAGAAAATAAGCATATCTGCGGAGTTATCACCTGGTAATAACGGACAACATGTTGATG
TTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTACcatttagccactcatcttccatccgagg
aggcagttcattttgcaagacctcgacagcagatggacggttagacgggcttggtgacagcaag
cttcttaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 817
Transcript exons: 35374558-35374807,35375096-35375244,35376990-35377177,35
377658-35377824,35377925-35377987
CATTTAGCCACTCATCTTCCATCCGAGGAGGCAGTTCATTTTGCAAGACCTCGACAGCAGATGG
ACGGTTAGACGGGCTTGGTGACAGCAAGCTTCTTAACAGGACTGACTGACGAGGAAATTTTGAT
TCCCATGACAATGGCGGGTCTCCCTTCTGCTTAAGATCGGAAAGAACAAGATGCCTTTCCATCG
CTGTGGCAAATGGATGCCAAAGCTCAAAAAATATTACTCCCAAACTGTACATGTCAACCTTTTC
ATTAATCTGTGGCCATTTCTGCTCTACCTCTGGTGCAGTATAAAAATATGTACCAACTTGACCT
GTTCCATCCATTGATACACCCAGTGCTTCAGTAGGAAGATATTGGTCATGATCTAGCTGCTCCA
GCTTCAGAAATTTGGCTAAACCAAAATCTCCAATTTTAATATCATTGCGGACATCAAAAAATAT
GTTGCTGGGTGTCAGGTCTCTGTGTAGGATTCCTTGACTATGGACATGAGCTAGACCTTCCACA
ATTTGTCGAAACAGGTGCCAGGCATGGTCAACATCAAAAGACGAGATGTATGTCTCAAAATCCT
GCCGCAAAGTCCTAGGACAATACTCCATTTGAATGTACAAGTACGTGGATTCCTGCTTATTCCC
ACCACCTGCATCCGATAGGCTGACTTCATCATAACTAAAGATAGAGCTCTCAGCAGTGCAGGAC
CCGCCAGCATTCAAAATATTATGATGACCGTATTCAGTTTCAATCCATGCCTGGTAATAACGGA
CAACATGTTGATGTTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTAC
						
					

						Genomic sequence
						
							CATTTAGCCACTCATCTTCCATCCGAGGAGGCAGTTCATTTTGCAAGACCTCGACAGCAGATGG
ACGGTTAGACGGGCTTGGTGACAGCAAGCTTCTTAACAGGACTGACTGACGAGGAAATTTTGAT
TCCCATGACAATGGCGGGTCTCCCTTCTGCTTAAGATCGGAAAGAACAAGATGCCTTTCCATCG
CTGTGGCAAATGGATGCCAAAGCTCAAAAAATATTACTCCCAAACTGTACATGTCAACCTGACA
AAAGACGTAAATAAGAGCAAGGTAAACTTGAAATTTTAGAGTCTGTCTAGTTGCCATATTAAAA
AAAATAACGTCATGTTTCACCAAATTATTAAACCATTGGTAGGAACTCTTCATTCATTTCGAGA
ATAAGAAAATAGTTCTGCATTCATTTTGAGAATAAGAGAAACACTATCTGCAGTGATAAAGGAA
AAATAAATACGAAAACATAGGCAGTAGGCCAGATCAACATTTCATAAAAAAATCATTTGTTAAG
TAAAAGTCCAAGTAATTTGTTCTGACCTTTTCATTAATCTGTGGCCATTTCTGCTCTACCTCTG
GTGCAGTATAAAAATATGTACCAACTTGACCTGTTCCATCCATTGATACACCCAGTGCTTCAGT
AGGAAGATATTGGTCATGATCTAGCTGCTCCAGCTTCAGAAATTTGGCTGACAACAATGATAAC
ATATATTTTAGCTGAGATTTTCTTCAACCAATTTTGGAGAAGAGGAAGCAGCCATTATTACAAA
GTCAAACACTGAGTGAACCATACACTACCACTGACCCACTCATGTTTTTGTCCTCGCTTCACAT
AAAAGAGTTAACAGTTAACCCAGGGATTTTGGTACAACCAAGGTGGGACTACCCACACCACCCC
CACCCCCCAAAAAAAACTCACATGACCATACACAGGGACCACTATGGGCCAAACCCAGACTAGG
CCAGATGTCACACACACACCCTCTCAAAGGCTCAACCGTCATCGTCAACCTACCTAACATACCC
ACAATTGGACAAACGATAACTAGGAACGGGAATTTCTAACACCCCAAAGTACAAATAGTTCTGA
TCCACTAGCACCAACTCATTTAGGCTTTCGTCCTCGCTTCACGTAAAAAGGTTAACCTATGGAT
GGTGATATGAACTCTAAAAGCCATGTTGGTCGAATCTGCTCTGACGCTCTCAATATCCAAGGTT
GGACTAAGACCCCCCACAATCTCACATCAACATACACATGGGCCACTATGTGACAAATCCAAAC
TGAGCCAGATGTCACATAAACTTCACATGATCACACTTGCCAAAAAATGAGTTCTTCCTCATCC
CCAAAATAATTGCACATCTCGCTTTTCCAGAAGTCAAAAAAATAAGTTTGACAAACTATACACA
AAAATATACTCTACTATTTATGACGTGTAATAAGTATCATTAGATTAATAGTCGAATATATTTT
CATAACGAACATATTAGGAGATACAAATGTTGATAATGTTTTGTCAAACTTTTGGAAAAGCGAG
ATGTGCAATTATTTTGGAAAATAGCTCAGAAGCCACATGCCCCACTTCTGGAAAACTTTTGCTC
TTTTCCAAGGCTGAGGAAGCGGGGTTGCTGCAGCATTTCTGTAGGAGAAAGAAGCTCCACAGAA
TATCTATTTATGTTGATGATGTGGCCTTATTTCTGCATCCTACTTAGGCTGATATTTCTATCAC
TCTTGATATCCTTAAGCTCTTTGGGGATGCCTCTGGTCTTCACAACAATGCACAGAAGTCCAAT
ATTTTCCCTGTTAGATGTTCTGAGGAATCCATCCTGGAAATTCAGAGCAGTCTACCTTGTGAAA
TTGCCTCCTTTCCAAGCAAATATTTAGGCCTTGTTCTTTCTTTGCACAAATTAACCACGTCAAC
ATTAACATCAACATAGCCTTTTAGTCCCAAGCAAGTTGGGGTAGGCTAGAGTTGAAACCCAACA
AGATGTCACCAAAAGGAGAAAGAGAGAGAAAGGGGAGGGGAAAAGCTTTTGAGAGCACTAAAAG
GAAAAATGCCTAATCATGGTTCGGACACGTGGATAGCTTCTTTCCAAACACTTCTAACCTCAAT
CTGAAATTCACTCCCACTGGAATTCGAACTCAGGACCTGAGGAGTGCTCCTCAGATCATCTAAC
CAACTCAGCTAGAGACCCACACATACAACCCCAAAAGGGAAGAAAACTAGCCCATAAAATCATA
TAATCGCATTTTAAAGCTTCATGTTTAAAGAACAATTTCCAAACAATCAGGCAAAGGATACTAC
ATGCAGATATCAGCAATAGTTGCATCCTATTCGACACTATGCTTTAGTAATTAGTAGTACATAA
TGATAAATATTATAATAAAAAATGAAACTAGATTGAAAATATATGACAGTTCTGGACACCGTAC
CTAAACCAAAATCTCCAATTTTAATATCATTGCGGACATCAAAAAATATGTTGCTGGGTGTCAG
GTCTCTGTGTAGGATTCCTTGACTATGGACATGAGCTAGACCTTCCACAATTTGTCGAAACAGG
TGCCAGGCATGGTCAACATCAAAAGACGAGATGTATGTCTCAAAATCCTGCCGCAAAGTCCTTC
AAACAATAGACCAAAAGAACTTAGATACAGAATAGCTACAATCAATACACTAAATGACTGAAAA
TACATAAACAAAGATCACATGTTTAAATTCTAAAGTTCTAAAAGTCAAACTACCAGGTCCTCCA
GAACCTTTCAAGATTACAAATTAATATTTATACTCTGCAGTAACTTAAACCCTCCAATTTTTTT
TACAACACAGGGATCATGGAGCTCATAAAACCAAGAAAATAATTTAGGGGAATCATTATATATC
CCACATTAGTGTCTGAGTGCTTGGGGGAATAAAAGAATTCTTAGTAGTATCAAGAAGAGTGATT
TTTGCATGGTACAGGTGTAGTGTACCCTTGATTAACTATCACAAAATTTTATATGGCCCGAGCA
TCAATAGTTTGACTAGTTTCTCATGTAATAAAAAGCAGTGAAGAAATAGCAGCACAAATTTCCT
TAGTGCGTAACTGCAAAATGAAACACACCTAGGACAATACTCCATTTGAATGTACAAGTACGTG
GATTCCTGCTTATTCCCACCACCTGCATCCGATAGGCTGACTTCATCATAACTAAAGATAGAGC
TCTCAGCAGTGCAGGACCCGCCAGCATTCAAAATATTATGATGACCGTATTCAGTTTCAATCCA
TGCCTGGCATCTCAATGACAGTTGAGTTAGAATTGTCCAAAACAAATTGTGAGTGCAATGAGTG
TTTTTGCGAAGAAAATAAGCATATCTGCGGAGTTATCACCTGGTAATAACGGACAACATGTTGA
TGTTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTAC
						
					

			
		

Sequences
Splice junction sequence	TTTGCGAAGAAAATAAGCATATCTGCGGAGTTATCACCTGGTAATAACGGACAACATGTTGATG TTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTACcatttagccactcatcttccatccgagg aggcagttcattttgcaagacctcgacagcagatggacggttagacgggcttggtgacagcaag cttcttaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 817 Transcript exons: 35374558-35374807,35375096-35375244,35376990-35377177,35 377658-35377824,35377925-35377987 CATTTAGCCACTCATCTTCCATCCGAGGAGGCAGTTCATTTTGCAAGACCTCGACAGCAGATGG ACGGTTAGACGGGCTTGGTGACAGCAAGCTTCTTAACAGGACTGACTGACGAGGAAATTTTGAT TCCCATGACAATGGCGGGTCTCCCTTCTGCTTAAGATCGGAAAGAACAAGATGCCTTTCCATCG CTGTGGCAAATGGATGCCAAAGCTCAAAAAATATTACTCCCAAACTGTACATGTCAACCTTTTC ATTAATCTGTGGCCATTTCTGCTCTACCTCTGGTGCAGTATAAAAATATGTACCAACTTGACCT GTTCCATCCATTGATACACCCAGTGCTTCAGTAGGAAGATATTGGTCATGATCTAGCTGCTCCA GCTTCAGAAATTTGGCTAAACCAAAATCTCCAATTTTAATATCATTGCGGACATCAAAAAATAT GTTGCTGGGTGTCAGGTCTCTGTGTAGGATTCCTTGACTATGGACATGAGCTAGACCTTCCACA ATTTGTCGAAACAGGTGCCAGGCATGGTCAACATCAAAAGACGAGATGTATGTCTCAAAATCCT GCCGCAAAGTCCTAGGACAATACTCCATTTGAATGTACAAGTACGTGGATTCCTGCTTATTCCC ACCACCTGCATCCGATAGGCTGACTTCATCATAACTAAAGATAGAGCTCTCAGCAGTGCAGGAC CCGCCAGCATTCAAAATATTATGATGACCGTATTCAGTTTCAATCCATGCCTGGTAATAACGGA CAACATGTTGATGTTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTAC
Genomic sequence	CATTTAGCCACTCATCTTCCATCCGAGGAGGCAGTTCATTTTGCAAGACCTCGACAGCAGATGG ACGGTTAGACGGGCTTGGTGACAGCAAGCTTCTTAACAGGACTGACTGACGAGGAAATTTTGAT TCCCATGACAATGGCGGGTCTCCCTTCTGCTTAAGATCGGAAAGAACAAGATGCCTTTCCATCG CTGTGGCAAATGGATGCCAAAGCTCAAAAAATATTACTCCCAAACTGTACATGTCAACCTGACA AAAGACGTAAATAAGAGCAAGGTAAACTTGAAATTTTAGAGTCTGTCTAGTTGCCATATTAAAA AAAATAACGTCATGTTTCACCAAATTATTAAACCATTGGTAGGAACTCTTCATTCATTTCGAGA ATAAGAAAATAGTTCTGCATTCATTTTGAGAATAAGAGAAACACTATCTGCAGTGATAAAGGAA AAATAAATACGAAAACATAGGCAGTAGGCCAGATCAACATTTCATAAAAAAATCATTTGTTAAG TAAAAGTCCAAGTAATTTGTTCTGACCTTTTCATTAATCTGTGGCCATTTCTGCTCTACCTCTG GTGCAGTATAAAAATATGTACCAACTTGACCTGTTCCATCCATTGATACACCCAGTGCTTCAGT AGGAAGATATTGGTCATGATCTAGCTGCTCCAGCTTCAGAAATTTGGCTGACAACAATGATAAC ATATATTTTAGCTGAGATTTTCTTCAACCAATTTTGGAGAAGAGGAAGCAGCCATTATTACAAA GTCAAACACTGAGTGAACCATACACTACCACTGACCCACTCATGTTTTTGTCCTCGCTTCACAT AAAAGAGTTAACAGTTAACCCAGGGATTTTGGTACAACCAAGGTGGGACTACCCACACCACCCC CACCCCCCAAAAAAAACTCACATGACCATACACAGGGACCACTATGGGCCAAACCCAGACTAGG CCAGATGTCACACACACACCCTCTCAAAGGCTCAACCGTCATCGTCAACCTACCTAACATACCC ACAATTGGACAAACGATAACTAGGAACGGGAATTTCTAACACCCCAAAGTACAAATAGTTCTGA TCCACTAGCACCAACTCATTTAGGCTTTCGTCCTCGCTTCACGTAAAAAGGTTAACCTATGGAT GGTGATATGAACTCTAAAAGCCATGTTGGTCGAATCTGCTCTGACGCTCTCAATATCCAAGGTT GGACTAAGACCCCCCACAATCTCACATCAACATACACATGGGCCACTATGTGACAAATCCAAAC TGAGCCAGATGTCACATAAACTTCACATGATCACACTTGCCAAAAAATGAGTTCTTCCTCATCC CCAAAATAATTGCACATCTCGCTTTTCCAGAAGTCAAAAAAATAAGTTTGACAAACTATACACA AAAATATACTCTACTATTTATGACGTGTAATAAGTATCATTAGATTAATAGTCGAATATATTTT CATAACGAACATATTAGGAGATACAAATGTTGATAATGTTTTGTCAAACTTTTGGAAAAGCGAG ATGTGCAATTATTTTGGAAAATAGCTCAGAAGCCACATGCCCCACTTCTGGAAAACTTTTGCTC TTTTCCAAGGCTGAGGAAGCGGGGTTGCTGCAGCATTTCTGTAGGAGAAAGAAGCTCCACAGAA TATCTATTTATGTTGATGATGTGGCCTTATTTCTGCATCCTACTTAGGCTGATATTTCTATCAC TCTTGATATCCTTAAGCTCTTTGGGGATGCCTCTGGTCTTCACAACAATGCACAGAAGTCCAAT ATTTTCCCTGTTAGATGTTCTGAGGAATCCATCCTGGAAATTCAGAGCAGTCTACCTTGTGAAA TTGCCTCCTTTCCAAGCAAATATTTAGGCCTTGTTCTTTCTTTGCACAAATTAACCACGTCAAC ATTAACATCAACATAGCCTTTTAGTCCCAAGCAAGTTGGGGTAGGCTAGAGTTGAAACCCAACA AGATGTCACCAAAAGGAGAAAGAGAGAGAAAGGGGAGGGGAAAAGCTTTTGAGAGCACTAAAAG GAAAAATGCCTAATCATGGTTCGGACACGTGGATAGCTTCTTTCCAAACACTTCTAACCTCAAT CTGAAATTCACTCCCACTGGAATTCGAACTCAGGACCTGAGGAGTGCTCCTCAGATCATCTAAC CAACTCAGCTAGAGACCCACACATACAACCCCAAAAGGGAAGAAAACTAGCCCATAAAATCATA TAATCGCATTTTAAAGCTTCATGTTTAAAGAACAATTTCCAAACAATCAGGCAAAGGATACTAC ATGCAGATATCAGCAATAGTTGCATCCTATTCGACACTATGCTTTAGTAATTAGTAGTACATAA TGATAAATATTATAATAAAAAATGAAACTAGATTGAAAATATATGACAGTTCTGGACACCGTAC CTAAACCAAAATCTCCAATTTTAATATCATTGCGGACATCAAAAAATATGTTGCTGGGTGTCAG GTCTCTGTGTAGGATTCCTTGACTATGGACATGAGCTAGACCTTCCACAATTTGTCGAAACAGG TGCCAGGCATGGTCAACATCAAAAGACGAGATGTATGTCTCAAAATCCTGCCGCAAAGTCCTTC AAACAATAGACCAAAAGAACTTAGATACAGAATAGCTACAATCAATACACTAAATGACTGAAAA TACATAAACAAAGATCACATGTTTAAATTCTAAAGTTCTAAAAGTCAAACTACCAGGTCCTCCA GAACCTTTCAAGATTACAAATTAATATTTATACTCTGCAGTAACTTAAACCCTCCAATTTTTTT TACAACACAGGGATCATGGAGCTCATAAAACCAAGAAAATAATTTAGGGGAATCATTATATATC CCACATTAGTGTCTGAGTGCTTGGGGGAATAAAAGAATTCTTAGTAGTATCAAGAAGAGTGATT TTTGCATGGTACAGGTGTAGTGTACCCTTGATTAACTATCACAAAATTTTATATGGCCCGAGCA TCAATAGTTTGACTAGTTTCTCATGTAATAAAAAGCAGTGAAGAAATAGCAGCACAAATTTCCT TAGTGCGTAACTGCAAAATGAAACACACCTAGGACAATACTCCATTTGAATGTACAAGTACGTG GATTCCTGCTTATTCCCACCACCTGCATCCGATAGGCTGACTTCATCATAACTAAAGATAGAGC TCTCAGCAGTGCAGGACCCGCCAGCATTCAAAATATTATGATGACCGTATTCAGTTTCAATCCA TGCCTGGCATCTCAATGACAGTTGAGTTAGAATTGTCCAAAACAAATTGTGAGTGCAATGAGTG TTTTTGCGAAGAAAATAAGCATATCTGCGGAGTTATCACCTGGTAATAACGGACAACATGTTGA TGTTGCAATCTTGAAAGTGTGGCTACCTCTCTGAGTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.069249187

Conservation Information
Conserved circRNAs	NA
PMCS	0.069249187

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							35377676-35377816(-)
35374562-35377816(-)
						
						Potential amino acid sequence
						
							MEYCPRTLRQDFETYISSFDVDHAWHLFRQIVEGLAHVHSQGILHRDLTPSNIFFDVRNDIKIG
DFGLAKFLKLEQLDHDQYLPTEALGVSMDGTGQVGTYFYTAPEVEQKWPQINEKVDMYSLGVIF
FELWHPFATAMERHLVLSDLKQKGDPPLSWESKFPRQSVLLRSLLSPSPSNRPSAVEVLQNELP
PRMEDEWLNGTQRGSHTFKIATSTCCPLLPGMD*(-)
MVLREVATLSRLQHQHVVRYYQAWIETEYGHHNILNAGGSCTAESSIFSYDEVSLSDAGGGNKQ
ESTYLYIQMEYCPRTLRQDFETYISSFDVDHAWHLFRQIVEGLAHVHSQGILHRDLTPSNIFFD
VRNDIKIGDFGLAKFLKLEQLDHDQYLPTEALGVSMDGTGQVGTYFYTAPEVEQKWPQINEKVD
MYSLGVIFFELWHPFATAMERHLVLSDLKQKGDPPLSWESKFPRQSVLLRSLLSPSPSNRPSAV
EVLQNELPPRMEDEWLNGTQRGSHTFKIATSTCCPLLPGMD*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	35377676-35377816(-) 35374562-35377816(-)
Potential amino acid sequence	MEYCPRTLRQDFETYISSFDVDHAWHLFRQIVEGLAHVHSQGILHRDLTPSNIFFDVRNDIKIG DFGLAKFLKLEQLDHDQYLPTEALGVSMDGTGQVGTYFYTAPEVEQKWPQINEKVDMYSLGVIF FELWHPFATAMERHLVLSDLKQKGDPPLSWESKFPRQSVLLRSLLSPSPSNRPSAVEVLQNELP PRMEDEWLNGTQRGSHTFKIATSTCCPLLPGMD(-) MVLREVATLSRLQHQHVVRYYQAWIETEYGHHNILNAGGSCTAESSIFSYDEVSLSDAGGGNKQ ESTYLYIQMEYCPRTLRQDFETYISSFDVDHAWHLFRQIVEGLAHVHSQGILHRDLTPSNIFFD VRNDIKIGDFGLAKFLKLEQLDHDQYLPTEALGVSMDGTGQVGTYFYTAPEVEQKWPQINEKVD MYSLGVIFFELWHPFATAMERHLVLSDLKQKGDPPLSWESKFPRQSVLLRSLLSPSPSNRPSAV EVLQNELPPRMEDEWLNGTQRGSHTFKIATSTCCPLLPGMD(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d003198_circ_g.5

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