Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 1_circ_ag.21 |
ID in PlantcircBase | ath_circ_001544 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2912345-2917162 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 1_circ_igg.22 AT1G09050_circ_g.1 AT1G09050_circ_g.2 |
Support reads | 9 |
Tissues | root, inflorescences, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.657551347 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR415 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |