Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021469_circ_g.3 |
ID in PlantcircBase | zma_circ_005517 |
Alias | seedling_test_circ_000500 |
Organism | Zea mays |
Position | chr7: 153020456-153021558 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d021469 |
Parent gene annotation |
Glutathione S-transferase F9 |
Parent gene strand | - |
Alternative splicing | Zm00001d021469_circ_g.4 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d021469_T001:2 Zm00001d021469_T006:2 Zm00001d021469_T002:2 Zm00001d021469_T008:2 Zm00001d021469_T010:2 Zm00001d021469_T005:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.022840284 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |