Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16560_circ_g.1 |
ID in PlantcircBase | ath_circ_002919 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5668418-5669039 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G16560 |
Parent gene annotation |
AT1G16560 protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G16560.5:2 AT1G16560.2:2 AT1G16560.6:2 AT1G16560.9:2 AT1G16560.3:3 AT1G16560.1:2 AT1G16560.8:3 AT1G16560.7:2 AT1G16560.4:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.121392377 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |