Splice junction sequence |
AAACATAGGAGTGTATTACCTTCATGAACACTGTGGAAATCATCATCACAGTCTGTTTCAAATG CGACATTGGACTCAAACCATGCGTCTTCGCCAGTTGcaagtagaattcgtgctgcggacgtgaa agtacaggtttctcgttataagcctgcatcagttttttctccggaccactcaaatggagatcat ccacgttt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1046 Transcript exons: 3417238-3417432,3417520-3417648,3417737-3417899,3417993- 3418128,3418216-3418557,3418652-3418732 CAAGTAGAATTCGTGCTGCGGACGTGAAAGTACAGGTTTCTCGTTATAAGCCTGCATCAGTTTT TTCTCCGGACCACTCAAATGGAGATCATCCACGTTTGCAACACGTCCCAATATCTTAAGCCGCT CTCTAAAAGGTGCCGTTGTATCCAAAGGGAAGCCTTTAACTTTCTCAACCTCATCATCTATTAA TCTCCGAATGCTTTCTTGAAAATGGAGCGGAAGTTCCTTTGAATAATTATCCGAGAGTTTGAAG TATAATACAATATTCATTCCTTCTCCATCAGATTCACCTTGAAAGATTGCAGTTGGATATAACG GAATCTGAACATTTACAACAAGGATAGATGGGAGTTTTGTGGATGTGGTAGTAACAGGAAGTTT GACATATTGTGCAACATGGTGTATTTTGTGTTCCGATAGGAAAACATCGACACCAAAAGGATTG TACGCAGCATGGCTAGGTGCAAACTCTTTCTTCTTCTCCCTGAGATATGTTTTGCCACGAACCC GAAAACTATTTGGATCAATGGTTGACCAACAATCGAGCATTTTCTTATCAATTGGACAGAAAGG AACCTGAGAACCCGCTATCGGTCTCTTCAGCTGCATTTTCGACAAAAACAAGGCTCCTGAAGCA TGACCTTCTCTCCATTTATAAGAAAGTCTAAGAGATGATTTTTTCCTGGAACTGGGAGGGCTAG AGCTAAGAGACCTTCTCTTGTCAATAGAAGGAACAGTTGTTGTATTCAGACAAGGCAAACAATT ACTCGGTAAGATCCTGCAGTTTTCCAAGAGACCTTCATCTGCAGATGAATCAATCAAATCAGGC TGGTTTGTGTCGTTTAAGTCACCGTCTGATTTCGATTGAGACATCACTTCATTTGAATCAGTGT CTCGTGTTGATGATGTGGTTGTCGTACTCGAGAGTGATACACGCTCAGATCCGTTTAAAGACAA TGCATCTTCATGAACACTGTGGAAATCATCATCACAGTCTGTTTCAAATGCGACATTGGACTCA AACCATGCGTCTTCGCCAGTTG
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Genomic sequence |
CAAGTAGAATTCGTGCTGCGGACGTGAAAGTACAGGTTTCTCGTTATAAGCCTGCATCAGTTTT TTCTCCGGACCACTCAAATGGAGATCATCCACGTTTGCAACACGTCCCAATATCTTAAGCCGCT CTCTAAAAGGTGCCGTTGTATCCAAAGGGAAGCCTTTAACTTTCTCAACCTCATCATCTATTAA TCTCTGCGCCAAAATAAACACGGATTCAATACAAAGAGCCTTTAACAGGGCCATAAAGATGAGA CTAACAGAATCCAGCTTTCAGTTTACCCGAATGCTTTCTTGAAAATGGAGCGGAAGTTCCTTTG AATAATTATCCGAGAGTTTGAAGTATAATACAATATTCATTCCTTCTCCATCAGATTCACCTTG AAAGATTGCAGTTGGATATAACGGAATCTGTTCCAACCGTAAACCAAGAGAAACAGTCACGGAG AATTTCAGAAAGAAGGCAAAAACACTGACTATCAGCAGAACTAGATCATACCTGAACATTTACA ACAAGGATAGATGGGAGTTTTGTGGATGTGGTAGTAACAGGAAGTTTGACATATTGTGCAACAT GGTGTATTTTGTGTTCCGATAGGAAAACATCGACACCAAAAGGATTGTACGCAGCATGGCTAGG TGCAAACTCTTTCTTCTTCTCCCTTAACCAAAAACAAAATATAGTTTCTTGTTAAGATGGTTAA ACTACTGTAGTAATCATAAGTAAAATTTGTATATTCTTTCCAATGGCTTACCTGAGATATGTTT TGCCACGAACCCGAAAACTATTTGGATCAATGGTTGACCAACAATCGAGCATTTTCTTATCAAT TGGACAGAAAGGAACCTGAGAACCCGCTATCGGTCTCTTCAGCTGCATTTTCGACAAAACTAAG ACAAGTTTCGAGATAATATGTGAGTTTACGATTTCAGATAAAGCTGGTAATCCAATGAACCAAG AGCAATATAAACACTTACACAAGGCTCCTGAAGCATGACCTTCTCTCCATTTATAAGAAAGTCT AAGAGATGATTTTTTCCTGGAACTGGGAGGGCTAGAGCTAAGAGACCTTCTCTTGTCAATAGAA GGAACAGTTGTTGTATTCAGACAAGGCAAACAATTACTCGGTAAGATCCTGCAGTTTTCCAAGA GACCTTCATCTGCAGATGAATCAATCAAATCAGGCTGGTTTGTGTCGTTTAAGTCACCGTCTGA TTTCGATTGAGACATCACTTCATTTGAATCAGTGTCTCGTGTTGATGATGTGGTTGTCGTACTC GAGAGTGATACACGCTCAGATCCGTTTAAAGACAATGCATCTGAAAACGAAACACAAATGGTCG AGAACATGAAGTTCCACAAAAAAAAACATCCATATTTCTCTCCTAGCTAACAAACATAGGAGTG TATTACCTTCATGAACACTGTGGAAATCATCATCACAGTCTGTTTCAAATGCGACATTGGACTC AAACCATGCGTCTTCGCCAGTTG |