Splice junction sequence |
CGAGCGACGTACCTGCTTGATTTTGACCGAAGTTGTTGAAACCAAAACCATTTGATGCTTGACC TGGCTGAGCTGATTGAAAGGGTGTCACACCAGCAGGcattgtcatgtaatggagcagtcgggcg ttgttcctttggaagtattgatttatcccttgaagaccactgttgaactgggcgtataactaga gctctagg
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 580 Transcript exons: 3408415-3408589,3408697-3408813,3409033-3409171,3409289- 3409349,3409426-3409513 CATTGTCATGTAATGGAGCAGTCGGGCGTTGTTCCTTTGGAAGTATTGATTTATCCCTTGAAGA CCACTGTTGAACTGGGCGTATAACTAGAGCTCTAGGGTTCTCCCTTGGAATGAAAAGAGCATCC GCCTTTGGTGTACTTGAGCTCTCTTCGTCATCAGTGAAAAATGGAACCTTTGGACCATTCTCGC CAGGACGGTACTTTCTTGCCGGCAGCCTGACCCGCCTGTGTAATAGGTGTCGAGAAGTCAGGAG AGATGATATTCTAACAGGAGCAGGTTTGTCAACAACAGGCATGCTGGAGATTCCATATTGAATG GAAGGTGAATTTCCACCTTGATTTATTGAAATCTGAGGCATAGCAGGAAGTGTTCCAAATGGGT TTGTCACAGCAACTGGTTGCAAAACAACAGAGTTCAGCGGAGCAGGCGATTGCCCGAAGTTGCC TTGACCAAAAATCCCCAGTCCACCAGCATTTCCAGTAGTATTAGCTGCTTGATTTTGACCGAAG TTGTTGAAACCAAAACCATTTGATGCTTGACCTGGCTGAGCTGATTGAAAGGGTGTCACACCAG CAGG
|
Genomic sequence |
CATTGTCATGTAATGGAGCAGTCGGGCGTTGTTCCTTTGGAAGTATTGATTTATCCCTTGAAGA CCACTGTTGAACTGGGCGTATAACTAGAGCTCTAGGGTTCTCCCTTGGAATGAAAAGAGCATCC GCCTTTGGTGTACTTGAGCTCTCTTCGTCATCAGTGAAAAATGGAACCTACAAAGAACATTTTA AGATTTAAACATATAGAACGAACCTCAGCACCAAGAGTTTAGATTGAGTAAAATAAATGTGATT ATATATTCACAAGAACGAAGCATTGCCTTTGGACCATTCTCGCCAGGACGGTACTTTCTTGCCG GCAGCCTGACCCGCCTGTGTAATAGGTGTCGAGAAGTCAGGAGAGATGATATTCTAACAGGAGC AGGTTTGTCAACAACCTGACAGGAAAAAGAAAATGATTTAGAACCAATTAATAATCAAGTAATC AACTACTTCTATTTATTATGAATAGTAACAAGCTTCAAGATGCATGTGGGAGAACTGAATGTCT AACATAGGGTATTATTAGAGGGAACAGCTATACGGAGACTATATCTAAATCTGGATAAAAAGAA CAATGCACCGTATGGGAGTTGCAGAAGGAAGAGCAGGCTTACAGGCATGCTGGAGATTCCATAT TGAATGGAAGGTGAATTTCCACCTTGATTTATTGAAATCTGAGGCATAGCAGGAAGTGTTCCAA ATGGGTTTGTCACAGCAACTGGTTGCAAAACAACAGAGTTCAGCGGAGCAGGCCTGTCAAAAAA ATAAAACGATGAAGCTAAAATAACACAACTTCCATAAAATGAAACCCATAAAATAAACTATCAA AAAAGAGCGGAAATAAAAGTCTTGGAAGCAGAAACGCCATACGATTGCCCGAAGTTGCCTTGAC CAAAAATCCCCAGTCCACCAGCATTTCCAGTAGTATTAGCTTTAGACCATGAATATAGAAGAGT TAGCATCTAGAAATAAGATGATAATGTCAGTGACTTGGTCGAGCGACGTACCTGCTTGATTTTG ACCGAAGTTGTTGAAACCAAAACCATTTGATGCTTGACCTGGCTGAGCTGATTGAAAGGGTGTC ACACCAGCAGG |