Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0431800_circ_g.2 |
ID in PlantcircBase | osa_circ_020412 |
Alias | NA |
Organism | Oryza sativa |
Position | chr3: 18133893-18134155 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os03g0431800 |
Parent gene annotation |
Conserved hypothetical protein. (Os03t0431800-00) |
Parent gene strand | + |
Alternative splicing | Os03g0431800_circ_igg.1 Os03g0431800_circ_g.1 Os03g0431800_circ_g.3 Os03g0431800_circ_g.4 Os03g0431800_circ_g.5 Os03g0431800_circ_g.6 Os03g0431800_circ_g.7 Os03g0431800_circ_g.8 Os03g0431800_circ_g.9 Os03g0431800_circ_g.10 Os03g0431800_circ_g.11 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os03t0431800-00:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.270089227 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
18133972-18133902(+) 18133949-18134129(-) |
Potential amino acid sequence |
MKCEKAKEREEAILQKFAKFEERTRN*(+) MLEQRCFGKTLLASLVPCSFLEFGKLL*(-) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |