Plant Circular RNA Database

Detail information of AT5G62670_circ_g.6

			
						 General Information
					
						CircRNA Name
						AT5G62670_circ_g.6
					
						ID in PlantcircBase
						ath_circ_045412
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr5: 25160648-25164426  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT5G62670						
					
						Parent gene annotation
						
							ATPase 11, plasma membrane-type
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT5G62670_circ_g.4 AT5G62670_circ_g.5 AT5G62670_circ_g.7 AT5G62670_circ_g.8 AT5G62670_circ_g.9 AT5G62670_circ_g.10 AT5G62670_circ_g.11 AT5G62670_circ_g.12 AT5G62670_circ_g.13 AT5G62670_circ_g.14 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT5G62670.1:14

General Information
CircRNA Name	AT5G62670_circ_g.6
ID in PlantcircBase	ath_circ_045412
Alias	NA
Organism	Arabidpsis thaliana
Position	chr5: 25160648-25164426 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	AT5G62670
Parent gene annotation	ATPase 11, plasma membrane-type
Parent gene strand	+
Alternative splicing	AT5G62670_circ_g.4 AT5G62670_circ_g.5 AT5G62670_circ_g.7 AT5G62670_circ_g.8 AT5G62670_circ_g.9 AT5G62670_circ_g.10 AT5G62670_circ_g.11 AT5G62670_circ_g.12 AT5G62670_circ_g.13 AT5G62670_circ_g.14
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT5G62670.1:14

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCTTTACAATATCGTATTCTATATTCCTCTTGATATCATCAAGTTCTTGATTCGTTATGCCCTT
AGCGGAAGAGCCTGGGATCTTGTTATCGAACAAAGGtcttctcttaccggtgaatctctcccag
taaccaaaggtccaggggatggtgtgtattctggctccacttgcaaacagggagagcttgaagc
agttgtga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TCTTCTCTTACCGGTGAATCTCTCCCAGTAACCAAAGGTCCAGGGGATGGTGTGTATTCTGGCT
CCACTTGCAAACAGGGAGAGCTTGAAGCAGTTGTGATTGCAACGGGAGTCCATACCTTCTTTGG
AAAGGCCGCACATCTTGTCGATACGACCAACCACGTTGGCCATTTTCAACAGGCATGATACACG
TTATCAAAATTCTCATTGTTGGGATCTTGTATGGTGCATTGTTGTTCCCTTTTCAAGTTTGTTC
AAACTATATTAATACTTATATCTGTTTTGTATATGTTCAGGTGTTAACTGCCATTGGGAACTTT
TGCATCTGCTCTATCGCAGTGGGGATGATAATTGAGATTGTCGTTATGTATCCCATTCAACACC
GTGCATATCGTCCTGGAATTGATAACCTTCTTGTGCTTCTCATTGGCGGTATCCCAATTGCCAT
GCCTACAGTTCTCTCTGTGACCATGGCCATTGGCTCGCATAGGTTATCTCAGCAGGTTAGCCAG
AACCACATAAGATGTATTTTTATAGAGTTTCTGTTTTATATTTTATCATTTTATGTTTGTCTTT
TAAGTTCTTAAGGATTTTTTTTAATTATTCATTAAGGTTTGATGTTAAACTTGCTTGATGTTGA
ATGATTAGCTGGGACTTGATAACTTTGTCTTGAAATATCTCTATGCTTTAATGGCTATATGATT
ATATTCTAATATATATCGCAGGGAGCAATAACCAAGAGGATGACAGCGATTGAGGAAATGGCTG
GCATGGATGTGCTTTGCAGCGACAAGACCGGAACTTTAACATTGAATAAACTTACTGTTGACAA
AAATCTTATCGAGGTAATGTGGGCTTGTTCAAATAAACACATCTTCCTAGGATCCCGGTAGCTG
ATTTCTGAATGAGAGCAAGTTTTTTGTATATAGGTTTTCACGAAAGGAGTGGATGCGGATACAG
TAGTTCTAATGGCAGCTCAAGCCTCTAGACTGGAAAACCAAGATGCCATTGATGCTGCTATAGT
TGGGATGCTTGCTGACCCTAAAGAGGTACTTTTATGAATACTGGTTGCCCCACAGAGACGTTTT
ATTTAATTTACTACAGAAGTACACTGTTAGTCTAAAGCTTCCTCAATAATACTTTTTGTAGGCA
CGGGCTGGTGTTCGAGAGGTTCACTTTCTTCCATTCAATCCCACTGACAAGAGGACGGCTCTTA
CATATATTGACAGTGATGGTAAAATGCATAGGGTCAGCAAAGGTGCACCTGAGCAAGTAAGCTG
TCTGTTCCCGTTTATGTTCTATTCAAAATATTTTGGTGTAGAGCATAGTCTTATTAGCTTCTAT
TGTCGATGTCTCAGATCCTAAATCTTGCACACAATAGAGCAGAGATTGAGCGGAGAGTACATGC
TGTAATAGACAAGTTCGCTGAACGGGGTTTGCGATCTCTTGCCGTGGCATACCAGGTAACTGGA
GACCAGCTCCTCAAGTTTCTCGTGATATATTAGTGTAAGTTGATACAAGATTCAAGGTTGTATG
AGTTTGGCCTTCTACAGGAAGTTCCGGAAGGGACGAAAGAAAGTGCTGGAGGCCCTTGGCAATT
TATGGGTCTCATGCCTCTTTTTGACCCACCTAGGCATGACAGTGCCGAGACAATTAGAAGGGCT
TTAAATCTTGGGGTGAATGTTAAAATGATCACAGGTGAGTTTTTTGTTCTACTCAGAACTTGAA
TGTCTACATATCTTTTTTCTTTGCCTTTTATATAAATTTGTTAGTCTATGATGCTTTAATCTTT
TTTTTTCTTCATTTTCCTGATATTGAAATCGTATCCTTATTCTAATTGACACATCTTAATCTTG
ACAGTCTTTTGATTCTTCATCAATGATGTTGTTTTGCCTCTCTTCTTGTCCGAATTCATTTTTC
TTTTCTAAATGTTTGTGGCTTTCTACAGGGGATCAGTTGGCTATAGGAAAAGAGACTGGCCGCC
GTTTAGGAATGGGAACCAACATGTACCCCTCATCTGCTTTGCTTGGACAGCACAAGGATGAGTC
TATTGGTGCCTTACCCATCGATGATCTTATAGAAAAGGCCGACGGCTTTGCTGGCGTTTTTCCT
GGTAAAATTTGTTTGCTTCTGTTTCTCTGAAAACTTTATCCAGCGTAGTTCCAACTCAGAATTT
TAACCAAATTATTCATGAAAACGGTTTGCAGAGCATAAATATGAGATAGTTAAGCGACTACAAG
CGAGGAAGCATATCTGTGGAATGACAGGTGATGGAGTAAATGATGCGCCTGCTCTTAAAAAGGC
TGATATTGGCATTGCAGTTGCTGATGCAACTGATGCAGCACGTAGTGCTTCAGATATCGTTCTT
ACTGAACCTGGTCTTAGTGTTATCATCAGCGCTGTCTTAACCAGCCGTGCTATCTTCCAGAGAA
TGAAAAATTATACAGTGAGTGTTGCATTTACTCTCAACCTCCATCACACTTTTAACTTTCTCTG
CATTTTCATAGAAGAATCATGCAATGTATCATGCAGACAATATCATTGGTTCTTTTGTCTTGTA
AAAAAATAACTTGAGCTGGCTTATTGTTTTTCTGGACAGATCTATGCGGTTTCCATCACTATCC
GTATTGTTGTAAGTTGTCATTCGATTTGTTGTATTTTTCCTACTCGTTTCGTTACACAAGTTCT
CAATACAACTTGATTATCATGTGTAATAATCCTTATGATTTCCTTTTCTACAATCCATGTTAAT
TCAGCTTGGCTTCATGCTGCTAGCTCTTATATGGAAGTTTGACTTTCCACCCTTCATGGTTCTT
ATCATTGCCATTCTGAATGATGGTTAGTTCATTATTTTTGCATTCGTCACTCTATAGTTCAGTT
TCTACTACTGTCAAAACTGTACCAAAATAAGAGTTCAGCATATCTATACTTCTAACCCTATGGA
TTAACTCTTATGGCATTGACTTTGTAGGCACAATTATGACAATATCAAAAGACAGAGTGAAACC
TTCCCCTCTTCCAGATAGCTGGAAACTCTCAGAGATTTTTGCAACTGGCGTTGTGTTTGGGAGC
TACATGGCGATGATGACAGTTATATTTTTCTGGGCTGCATATAAAACCGACTTCTTCCCGGTAT
GATTTCTCTCTGCTCCTCAGTATAACAACAATACCCTTGCTTTGTTTTTCTCTCTCTGGATTGT
GTGCTCCATTAACACGTCTGAAGTTGTTTTCCAACGCTAGTCTACTAAAACATCGTAAACCAGT
TTCAAATTCCTGTGTTCTGTATCTTAGTGACCAGCTTTTATTATTTGAATTCAGCGAACATTTG
GAGTTTCAACCCTGGAGAAAACAGCACATGATGATTTCCGGAAGCTTGCCTCGGCAATATACCT
GCAAGTCAGCATCATAAGTCAGGCGCTTATCTTTGTGACCCGATCACGGAGTTGGTCTTATGTA
GAACGTCCTGGGATGTTGCTTGTGGTAGCCTTTATCCTTGCACAATTGGTAAGTGTGCCACTTC
ACTATCTGTGGTCAGCACTCAAGTCAGAGTCATAAACCGCTGTTCCATTTCATTGATTTTTTTT
CTTCCAATACAGGTGGCTACTCTAATTGCAGTCTATGCGAATTGGAGCTTTGCTGCAATAGAAG
GGATCGGGTGGGGATGGGCCGGGGTCATCTGGCTTTACAATATCGTATTCTATATTCCTCTTGA
TATCATCAAGTTCTTGATTCGTTATGCCCTTAGCGGAAGAGCCTGGGATCTTGTTATCGAACAA
AGG
						
					

			
		

Sequences
Splice junction sequence	GCTTTACAATATCGTATTCTATATTCCTCTTGATATCATCAAGTTCTTGATTCGTTATGCCCTT AGCGGAAGAGCCTGGGATCTTGTTATCGAACAAAGGtcttctcttaccggtgaatctctcccag taaccaaaggtccaggggatggtgtgtattctggctccacttgcaaacagggagagcttgaagc agttgtga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TCTTCTCTTACCGGTGAATCTCTCCCAGTAACCAAAGGTCCAGGGGATGGTGTGTATTCTGGCT CCACTTGCAAACAGGGAGAGCTTGAAGCAGTTGTGATTGCAACGGGAGTCCATACCTTCTTTGG AAAGGCCGCACATCTTGTCGATACGACCAACCACGTTGGCCATTTTCAACAGGCATGATACACG TTATCAAAATTCTCATTGTTGGGATCTTGTATGGTGCATTGTTGTTCCCTTTTCAAGTTTGTTC AAACTATATTAATACTTATATCTGTTTTGTATATGTTCAGGTGTTAACTGCCATTGGGAACTTT TGCATCTGCTCTATCGCAGTGGGGATGATAATTGAGATTGTCGTTATGTATCCCATTCAACACC GTGCATATCGTCCTGGAATTGATAACCTTCTTGTGCTTCTCATTGGCGGTATCCCAATTGCCAT GCCTACAGTTCTCTCTGTGACCATGGCCATTGGCTCGCATAGGTTATCTCAGCAGGTTAGCCAG AACCACATAAGATGTATTTTTATAGAGTTTCTGTTTTATATTTTATCATTTTATGTTTGTCTTT TAAGTTCTTAAGGATTTTTTTTAATTATTCATTAAGGTTTGATGTTAAACTTGCTTGATGTTGA ATGATTAGCTGGGACTTGATAACTTTGTCTTGAAATATCTCTATGCTTTAATGGCTATATGATT ATATTCTAATATATATCGCAGGGAGCAATAACCAAGAGGATGACAGCGATTGAGGAAATGGCTG GCATGGATGTGCTTTGCAGCGACAAGACCGGAACTTTAACATTGAATAAACTTACTGTTGACAA AAATCTTATCGAGGTAATGTGGGCTTGTTCAAATAAACACATCTTCCTAGGATCCCGGTAGCTG ATTTCTGAATGAGAGCAAGTTTTTTGTATATAGGTTTTCACGAAAGGAGTGGATGCGGATACAG TAGTTCTAATGGCAGCTCAAGCCTCTAGACTGGAAAACCAAGATGCCATTGATGCTGCTATAGT TGGGATGCTTGCTGACCCTAAAGAGGTACTTTTATGAATACTGGTTGCCCCACAGAGACGTTTT ATTTAATTTACTACAGAAGTACACTGTTAGTCTAAAGCTTCCTCAATAATACTTTTTGTAGGCA CGGGCTGGTGTTCGAGAGGTTCACTTTCTTCCATTCAATCCCACTGACAAGAGGACGGCTCTTA CATATATTGACAGTGATGGTAAAATGCATAGGGTCAGCAAAGGTGCACCTGAGCAAGTAAGCTG TCTGTTCCCGTTTATGTTCTATTCAAAATATTTTGGTGTAGAGCATAGTCTTATTAGCTTCTAT TGTCGATGTCTCAGATCCTAAATCTTGCACACAATAGAGCAGAGATTGAGCGGAGAGTACATGC TGTAATAGACAAGTTCGCTGAACGGGGTTTGCGATCTCTTGCCGTGGCATACCAGGTAACTGGA GACCAGCTCCTCAAGTTTCTCGTGATATATTAGTGTAAGTTGATACAAGATTCAAGGTTGTATG AGTTTGGCCTTCTACAGGAAGTTCCGGAAGGGACGAAAGAAAGTGCTGGAGGCCCTTGGCAATT TATGGGTCTCATGCCTCTTTTTGACCCACCTAGGCATGACAGTGCCGAGACAATTAGAAGGGCT TTAAATCTTGGGGTGAATGTTAAAATGATCACAGGTGAGTTTTTTGTTCTACTCAGAACTTGAA TGTCTACATATCTTTTTTCTTTGCCTTTTATATAAATTTGTTAGTCTATGATGCTTTAATCTTT TTTTTTCTTCATTTTCCTGATATTGAAATCGTATCCTTATTCTAATTGACACATCTTAATCTTG ACAGTCTTTTGATTCTTCATCAATGATGTTGTTTTGCCTCTCTTCTTGTCCGAATTCATTTTTC TTTTCTAAATGTTTGTGGCTTTCTACAGGGGATCAGTTGGCTATAGGAAAAGAGACTGGCCGCC GTTTAGGAATGGGAACCAACATGTACCCCTCATCTGCTTTGCTTGGACAGCACAAGGATGAGTC TATTGGTGCCTTACCCATCGATGATCTTATAGAAAAGGCCGACGGCTTTGCTGGCGTTTTTCCT GGTAAAATTTGTTTGCTTCTGTTTCTCTGAAAACTTTATCCAGCGTAGTTCCAACTCAGAATTT TAACCAAATTATTCATGAAAACGGTTTGCAGAGCATAAATATGAGATAGTTAAGCGACTACAAG CGAGGAAGCATATCTGTGGAATGACAGGTGATGGAGTAAATGATGCGCCTGCTCTTAAAAAGGC TGATATTGGCATTGCAGTTGCTGATGCAACTGATGCAGCACGTAGTGCTTCAGATATCGTTCTT ACTGAACCTGGTCTTAGTGTTATCATCAGCGCTGTCTTAACCAGCCGTGCTATCTTCCAGAGAA TGAAAAATTATACAGTGAGTGTTGCATTTACTCTCAACCTCCATCACACTTTTAACTTTCTCTG CATTTTCATAGAAGAATCATGCAATGTATCATGCAGACAATATCATTGGTTCTTTTGTCTTGTA AAAAAATAACTTGAGCTGGCTTATTGTTTTTCTGGACAGATCTATGCGGTTTCCATCACTATCC GTATTGTTGTAAGTTGTCATTCGATTTGTTGTATTTTTCCTACTCGTTTCGTTACACAAGTTCT CAATACAACTTGATTATCATGTGTAATAATCCTTATGATTTCCTTTTCTACAATCCATGTTAAT TCAGCTTGGCTTCATGCTGCTAGCTCTTATATGGAAGTTTGACTTTCCACCCTTCATGGTTCTT ATCATTGCCATTCTGAATGATGGTTAGTTCATTATTTTTGCATTCGTCACTCTATAGTTCAGTT TCTACTACTGTCAAAACTGTACCAAAATAAGAGTTCAGCATATCTATACTTCTAACCCTATGGA TTAACTCTTATGGCATTGACTTTGTAGGCACAATTATGACAATATCAAAAGACAGAGTGAAACC TTCCCCTCTTCCAGATAGCTGGAAACTCTCAGAGATTTTTGCAACTGGCGTTGTGTTTGGGAGC TACATGGCGATGATGACAGTTATATTTTTCTGGGCTGCATATAAAACCGACTTCTTCCCGGTAT GATTTCTCTCTGCTCCTCAGTATAACAACAATACCCTTGCTTTGTTTTTCTCTCTCTGGATTGT GTGCTCCATTAACACGTCTGAAGTTGTTTTCCAACGCTAGTCTACTAAAACATCGTAAACCAGT TTCAAATTCCTGTGTTCTGTATCTTAGTGACCAGCTTTTATTATTTGAATTCAGCGAACATTTG GAGTTTCAACCCTGGAGAAAACAGCACATGATGATTTCCGGAAGCTTGCCTCGGCAATATACCT GCAAGTCAGCATCATAAGTCAGGCGCTTATCTTTGTGACCCGATCACGGAGTTGGTCTTATGTA GAACGTCCTGGGATGTTGCTTGTGGTAGCCTTTATCCTTGCACAATTGGTAAGTGTGCCACTTC ACTATCTGTGGTCAGCACTCAAGTCAGAGTCATAAACCGCTGTTCCATTTCATTGATTTTTTTT CTTCCAATACAGGTGGCTACTCTAATTGCAGTCTATGCGAATTGGAGCTTTGCTGCAATAGAAG GGATCGGGTGGGGATGGGCCGGGGTCATCTGGCTTTACAATATCGTATTCTATATTCCTCTTGA TATCATCAAGTTCTTGATTCGTTATGCCCTTAGCGGAAGAGCCTGGGATCTTGTTATCGAACAA AGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.149968073

Conservation Information
Conserved circRNAs	NA
PMCS	0.149968073

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							25160992-25164423(+)
						
					

						Potential amino acid sequence
						
							MIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE
EMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGML
ADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAV
IDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI
TGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVK
RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI
FQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPD
SWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVS
IISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLY
NIVFYIPLDIIKFLIRYALSGRAWDLVIEQRSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVV
IATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGID
NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL
TVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPT
DKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPE
GTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM
YPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG
FMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM
TVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERP
GMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSG
RAWDLVIEQRSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNH
VGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVL
MAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKG
APEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDP
PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPID
DLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS
DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIA
ILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVS
TLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVY
ANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRSSLTGESLPVT
KGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSIAV
GMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI
EEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM
LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHA
VIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM
ITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIV
KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA
IFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLP
DSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQV
SIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWL
YNIVFYIPLDIIKFLIRYALSGRAWDLVIEQR(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	25160992-25164423(+)
Potential amino acid sequence	MIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE EMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGML ADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAV IDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI TGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVK RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI FQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPD SWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVS IISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLY NIVFYIPLDIIKFLIRYALSGRAWDLVIEQRSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVV IATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGID NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL TVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPT DKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPE GTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM YPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG FMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM TVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERP GMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSG RAWDLVIEQRSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNH VGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVL MAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKG APEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDP PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPID DLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIA ILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVS TLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVY ANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRSSLTGESLPVT KGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSIAV GMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI EEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHA VIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM ITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIV KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA IFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLP DSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQV SIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWL YNIVFYIPLDIIKFLIRYALSGRAWDLVIEQR(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT5G62670_circ_g.6

Address

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