Plant Circular RNA Database

Detail information of orai.002G023400_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.002G023400_circ_g.1
					
						ID in PlantcircBase
						gra_circ_000115
					
						Alias
						Chr02:1667127|1669119
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr02: 1667127-1669119  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.002G023400						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						2
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.002G023400.1:3
Gorai.002G023400.2:3
Gorai.002G023400.3:2
Gorai.002G023400.4:3

General Information
CircRNA Name	orai.002G023400_circ_g.1
ID in PlantcircBase	gra_circ_000115
Alias	Chr02:1667127\|1669119
Organism	Gossypium raimondii
Position	chrChr02: 1667127-1669119 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.002G023400
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	2
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.002G023400.1:3 Gorai.002G023400.2:3 Gorai.002G023400.3:2 Gorai.002G023400.4:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAAATACAATATTCCTCCCATAAAAGTCTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAG
ACCGTTTCCTAGCAAGCATGCTGACGATGCTGCCATctgtttagccaaaccagtaatctgctgc
aaatcaccagctgcacctgttgtcacctcaggttcaccgaagatgatttcctctgcggctctgc
caccaagt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1743
Transcript exons: 1667127-1667367,1667534-1667847,1667932-1669119
CTGTTTAGCCAAACCAGTAATCTGCTGCAAATCACCAGCTGCACCTGTTGTCACCTCAGGTTCA
CCGAAGATGATTTCCTCTGCGGCTCTGCCACCAAGTCCACCAACAATTCTTGCAAAGAGTTGTT
GCTTGGAGATCAAGGTAGGGTCATCTGAAGGAATGAACCAGGTAAGACCGCGTGCCTGGCCACG
TGGAATCAAGGTGACTTTTTGAACAGGATCGTGACCCGGTGTCAAAGTTCCGCAAATGGCATGG
CCGACCTCGTGGTATGCAACCAAGCTTTTGCTCTTTCCATCAGTCATAACTGTTCCTTCCATTC
CAGCCACGATCCTATCAATTGAATCATCGATTTCTTTAGATGAAATTGCGGTCTTGCCACGCCG
ACCAGCCAATATAGCAGCTTCGTTTAATAGATTTGCTAGATCTGCTCCACTAAAACCAGGCGTT
CTCATGGCTATAACATCAAATGATACATCAGTTTCAAACTTCTTGTTGCTACCATGAACCTTTA
GTATCTCAGTTCTGCCTCTGATATCCGGAACATCAACAGTGACCTGTCTATCAAACCGTCCTGG
CCTCAACAAAGCGGAATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTG
TTACCCTCGAAACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCC
CTCCACCAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACAATACA
GGGGGCATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAAC
ATTTCAACAAACTCAGAACCGGAAATGGAGAAGAATGGCACACCAGCTTCACCGGCAATTGCCT
TAGCAAGAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACACCTTTAGGGATACGAGC
CCCGACTGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCCACAACCTCCATGAAGTCCTGCTTT
GCTTCATCAACTCCAGCAACATCATCGAATGTTACACCGGTGTTAGGTTCCATTTGAAACTTTG
CTTTCGATTGACCAAAAGCAAGGGGAAAACCAGGCCCACCCGGACCTCCCATTCCACCAGACGA
TCTCCTTGAAAGAAGGAACAACCCTCCAATCAAGATTAATGGGAATGCTAGATTGCCAATCAAG
TTAAATAACAACGAACCGGAGTCTTCTTGAGCATTATGGGCAGCAAAGTCAATGTTCTTCTCCC
TAAACTTCTGAAGAAGTTCTTGGCTAAGTCCTGGCAACTGCACACGAACTCGTTGAACACGGTT
TCCCAACTCAGGAGAGACAGCTTCCACAATAGCTATCGTTCCATTTTCAAACAAATCCACTTTT
TTAACCCTGTCCTTGTCCAAATACTCCAAAAACCTAGAATACGACATTCTCGAGGAAGAAACCC
CTTGTTCATCAGCATACGCTTTACCATTTCCTAGTAAAGCCGGAACTCCAATTCCAGCAGTTCC
GAGTAATGACTTCAAGAATCCCCTTCTTCCTTCATGTTGTTTAAGTTTTAAAGATGCCTTTACG
AGTACGGCATTCGATTTCCGACCCAACGATGAAATGGCGGGGGTAAATACAATATTCCTCCCAT
AAAAGTCTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAGACCGTTTCCTAGCAAGCATGC
TGACGATGCTGCCAT
						
					

						Genomic sequence
						
							CTGTTTAGCCAAACCAGTAATCTGCTGCAAATCACCAGCTGCACCTGTTGTCACCTCAGGTTCA
CCGAAGATGATTTCCTCTGCGGCTCTGCCACCAAGTCCACCAACAATTCTTGCAAAGAGTTGTT
GCTTGGAGATCAAGGTAGGGTCATCTGAAGGAATGAACCAGGTAAGACCGCGTGCCTGGCCACG
TGGAATCAAGGTGACTTTTTGAACAGGATCGTGACCCGGTGTCAAAGTTCTGAGACATGAAGGT
ATCACAATCGTAAGTTTCTTAAACAGTCATTCTAAAATAAAGACGACAGTATTAACAGATAAAA
ACGAACAAGCATGCATAATGAGAGTTGAAGACGTTATTTGAGGTATGAAACACGAAAAGTAAAT
TAACATGCTCTTATTTCACTCACCCGCAAATGGCATGGCCGACCTCGTGGTATGCAACCAAGCT
TTTGCTCTTTCCATCAGTCATAACTGTTCCTTCCATTCCAGCCACGATCCTATCAATTGAATCA
TCGATTTCTTTAGATGAAATTGCGGTCTTGCCACGCCGACCAGCCAATATAGCAGCTTCGTTTA
ATAGATTTGCTAGATCTGCTCCACTAAAACCAGGCGTTCTCATGGCTATAACATCAAATGATAC
ATCAGTTTCAAACTTCTTGTTGCTACCATGAACCTTTAGTATCTCAGTTCTGCCTCTGATATCC
GGAACATCAACAGTGACCTGCATTAAAGCATCATGTTGGCTACTTTGTTGTGTAGCTAATAAGA
ATGATACAACATACGAGCAATAATTATATGTTTTTACCTGTCTATCAAACCGTCCTGGCCTCAA
CAAAGCGGAATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTGTTACCC
TCGAAACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCCCTCCAC
CAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACAATACAGGGGGC
ATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAACATTTCA
ACAAACTCAGAACCGGAAATGGAGAAGAATGGCACACCAGCTTCACCGGCAATTGCCTTAGCAA
GAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACACCTTTAGGGATACGAGCCCCGAC
TGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCCACAACCTCCATGAAGTCCTGCTTTGCTTCA
TCAACTCCAGCAACATCATCGAATGTTACACCGGTGTTAGGTTCCATTTGAAACTTTGCTTTCG
ATTGACCAAAAGCAAGGGGAAAACCAGGCCCACCCGGACCTCCCATTCCACCAGACGATCTCCT
TGAAAGAAGGAACAACCCTCCAATCAAGATTAATGGGAATGCTAGATTGCCAATCAAGTTAAAT
AACAACGAACCGGAGTCTTCTTGAGCATTATGGGCAGCAAAGTCAATGTTCTTCTCCCTAAACT
TCTGAAGAAGTTCTTGGCTAAGTCCTGGCAACTGCACACGAACTCGTTGAACACGGTTTCCCAA
CTCAGGAGAGACAGCTTCCACAATAGCTATCGTTCCATTTTCAAACAAATCCACTTTTTTAACC
CTGTCCTTGTCCAAATACTCCAAAAACCTAGAATACGACATTCTCGAGGAAGAAACCCCTTGTT
CATCAGCATACGCTTTACCATTTCCTAGTAAAGCCGGAACTCCAATTCCAGCAGTTCCGAGTAA
TGACTTCAAGAATCCCCTTCTTCCTTCATGTTGTTTAAGTTTTAAAGATGCCTTTACGAGTACG
GCATTCGATTTCCGACCCAACGATGAAATGGCGGGGGTAAATACAATATTCCTCCCATAAAAGT
CTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAGACCGTTTCCTAGCAAGCATGCTGACGA
TGCTGCCAT
						
					

			
		

Sequences
Splice junction sequence	TAAATACAATATTCCTCCCATAAAAGTCTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAG ACCGTTTCCTAGCAAGCATGCTGACGATGCTGCCATctgtttagccaaaccagtaatctgctgc aaatcaccagctgcacctgttgtcacctcaggttcaccgaagatgatttcctctgcggctctgc caccaagt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1743 Transcript exons: 1667127-1667367,1667534-1667847,1667932-1669119 CTGTTTAGCCAAACCAGTAATCTGCTGCAAATCACCAGCTGCACCTGTTGTCACCTCAGGTTCA CCGAAGATGATTTCCTCTGCGGCTCTGCCACCAAGTCCACCAACAATTCTTGCAAAGAGTTGTT GCTTGGAGATCAAGGTAGGGTCATCTGAAGGAATGAACCAGGTAAGACCGCGTGCCTGGCCACG TGGAATCAAGGTGACTTTTTGAACAGGATCGTGACCCGGTGTCAAAGTTCCGCAAATGGCATGG CCGACCTCGTGGTATGCAACCAAGCTTTTGCTCTTTCCATCAGTCATAACTGTTCCTTCCATTC CAGCCACGATCCTATCAATTGAATCATCGATTTCTTTAGATGAAATTGCGGTCTTGCCACGCCG ACCAGCCAATATAGCAGCTTCGTTTAATAGATTTGCTAGATCTGCTCCACTAAAACCAGGCGTT CTCATGGCTATAACATCAAATGATACATCAGTTTCAAACTTCTTGTTGCTACCATGAACCTTTA GTATCTCAGTTCTGCCTCTGATATCCGGAACATCAACAGTGACCTGTCTATCAAACCGTCCTGG CCTCAACAAAGCGGAATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTG TTACCCTCGAAACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCC CTCCACCAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACAATACA GGGGGCATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAAC ATTTCAACAAACTCAGAACCGGAAATGGAGAAGAATGGCACACCAGCTTCACCGGCAATTGCCT TAGCAAGAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACACCTTTAGGGATACGAGC CCCGACTGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCCACAACCTCCATGAAGTCCTGCTTT GCTTCATCAACTCCAGCAACATCATCGAATGTTACACCGGTGTTAGGTTCCATTTGAAACTTTG CTTTCGATTGACCAAAAGCAAGGGGAAAACCAGGCCCACCCGGACCTCCCATTCCACCAGACGA TCTCCTTGAAAGAAGGAACAACCCTCCAATCAAGATTAATGGGAATGCTAGATTGCCAATCAAG TTAAATAACAACGAACCGGAGTCTTCTTGAGCATTATGGGCAGCAAAGTCAATGTTCTTCTCCC TAAACTTCTGAAGAAGTTCTTGGCTAAGTCCTGGCAACTGCACACGAACTCGTTGAACACGGTT TCCCAACTCAGGAGAGACAGCTTCCACAATAGCTATCGTTCCATTTTCAAACAAATCCACTTTT TTAACCCTGTCCTTGTCCAAATACTCCAAAAACCTAGAATACGACATTCTCGAGGAAGAAACCC CTTGTTCATCAGCATACGCTTTACCATTTCCTAGTAAAGCCGGAACTCCAATTCCAGCAGTTCC GAGTAATGACTTCAAGAATCCCCTTCTTCCTTCATGTTGTTTAAGTTTTAAAGATGCCTTTACG AGTACGGCATTCGATTTCCGACCCAACGATGAAATGGCGGGGGTAAATACAATATTCCTCCCAT AAAAGTCTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAGACCGTTTCCTAGCAAGCATGC TGACGATGCTGCCAT
Genomic sequence	CTGTTTAGCCAAACCAGTAATCTGCTGCAAATCACCAGCTGCACCTGTTGTCACCTCAGGTTCA CCGAAGATGATTTCCTCTGCGGCTCTGCCACCAAGTCCACCAACAATTCTTGCAAAGAGTTGTT GCTTGGAGATCAAGGTAGGGTCATCTGAAGGAATGAACCAGGTAAGACCGCGTGCCTGGCCACG TGGAATCAAGGTGACTTTTTGAACAGGATCGTGACCCGGTGTCAAAGTTCTGAGACATGAAGGT ATCACAATCGTAAGTTTCTTAAACAGTCATTCTAAAATAAAGACGACAGTATTAACAGATAAAA ACGAACAAGCATGCATAATGAGAGTTGAAGACGTTATTTGAGGTATGAAACACGAAAAGTAAAT TAACATGCTCTTATTTCACTCACCCGCAAATGGCATGGCCGACCTCGTGGTATGCAACCAAGCT TTTGCTCTTTCCATCAGTCATAACTGTTCCTTCCATTCCAGCCACGATCCTATCAATTGAATCA TCGATTTCTTTAGATGAAATTGCGGTCTTGCCACGCCGACCAGCCAATATAGCAGCTTCGTTTA ATAGATTTGCTAGATCTGCTCCACTAAAACCAGGCGTTCTCATGGCTATAACATCAAATGATAC ATCAGTTTCAAACTTCTTGTTGCTACCATGAACCTTTAGTATCTCAGTTCTGCCTCTGATATCC GGAACATCAACAGTGACCTGCATTAAAGCATCATGTTGGCTACTTTGTTGTGTAGCTAATAAGA ATGATACAACATACGAGCAATAATTATATGTTTTTACCTGTCTATCAAACCGTCCTGGCCTCAA CAAAGCGGAATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTGTTACCC TCGAAACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCCCTCCAC CAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACAATACAGGGGGC ATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAACATTTCA ACAAACTCAGAACCGGAAATGGAGAAGAATGGCACACCAGCTTCACCGGCAATTGCCTTAGCAA GAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACACCTTTAGGGATACGAGCCCCGAC TGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCCACAACCTCCATGAAGTCCTGCTTTGCTTCA TCAACTCCAGCAACATCATCGAATGTTACACCGGTGTTAGGTTCCATTTGAAACTTTGCTTTCG ATTGACCAAAAGCAAGGGGAAAACCAGGCCCACCCGGACCTCCCATTCCACCAGACGATCTCCT TGAAAGAAGGAACAACCCTCCAATCAAGATTAATGGGAATGCTAGATTGCCAATCAAGTTAAAT AACAACGAACCGGAGTCTTCTTGAGCATTATGGGCAGCAAAGTCAATGTTCTTCTCCCTAAACT TCTGAAGAAGTTCTTGGCTAAGTCCTGGCAACTGCACACGAACTCGTTGAACACGGTTTCCCAA CTCAGGAGAGACAGCTTCCACAATAGCTATCGTTCCATTTTCAAACAAATCCACTTTTTTAACC CTGTCCTTGTCCAAATACTCCAAAAACCTAGAATACGACATTCTCGAGGAAGAAACCCCTTGTT CATCAGCATACGCTTTACCATTTCCTAGTAAAGCCGGAACTCCAATTCCAGCAGTTCCGAGTAA TGACTTCAAGAATCCCCTTCTTCCTTCATGTTGTTTAAGTTTTAAAGATGCCTTTACGAGTACG GCATTCGATTTCCGACCCAACGATGAAATGGCGGGGGTAAATACAATATTCCTCCCATAAAAGT CTTTACTCAACTTCGATTTAGTTCTGTGAGTAGACAGACCGTTTCCTAGCAAGCATGCTGACGA TGCTGCCAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.785695292

Conservation Information
Conserved circRNAs	NA
PMCS	0.785695292

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							1669120-1667129(-)
						
					

						Potential amino acid sequence
						
							MAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLKLKQHEGRRGF
LKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAV
SPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLF
LLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER
FTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA
KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD
SALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSGADLANLLNEA
AILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQK
VTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQIT
GLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLKLKQHE
GRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIA
IVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLIL
IGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFL
KKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD
LFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNR
ADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSGADLAN
LLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGH
DPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGD
LQQITGLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLK
LKQHEGRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFE
NGTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLA
FPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFME
VVEFLKKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA
SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVI
AATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSG
ADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGT
LTPGHDPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTT
GAAGDLQQITGLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLV
KASLKLKQHEGRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKK
VDLFENGTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNL
IGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAK
QDFMEVVEFLKKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF
VGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT
GIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRT
PGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH
AICGTLTPGHDPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGE
PEVTTGAAGDLQQITGLAKQ(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	1669120-1667129(-)
Potential amino acid sequence	MAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLKLKQHEGRRGF LKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAV SPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLF LLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER FTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD SALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSGADLANLLNEA AILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQK VTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQIT GLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLKLKQHE GRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIA IVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLIL IGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFL KKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD LFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNR ADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSGADLAN LLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGH DPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGD LQQITGLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLVKASLK LKQHEGRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFE NGTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLA FPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFME VVEFLKKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVI AATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRTPGFSG ADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGT LTPGHDPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTT GAAGDLQQITGLAKQMAASSACLLGNGLSTHRTKSKLSKDFYGRNIVFTPAISSLGRKSNAVLV KASLKLKQHEGRRGFLKSLLGTAGIGVPALLGNGKAYADEQGVSSSRMSYSRFLEYLDKDRVKK VDLFENGTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNL IGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAK QDFMEVVEFLKKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF VGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT GIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFETDVSFDVIAMRT PGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH AICGTLTPGHDPVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGE PEVTTGAAGDLQQITGLAKQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.002G023400_circ_g.1

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