Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os05g0480000_circ_g.3 |
ID in PlantcircBase | osa_circ_042140 |
Alias | NA |
Organism | Oryza sativa |
Position | chr5: 23599041-23599126 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | CIRI-long |
Parent gene | Os05g0480000 |
Parent gene annotation |
Serine/threonine protein kinase, Photosystem II (PSII) repair, P hosphorylation of PSII core protein (Os05t0480000-01);Similar to STN8 (Os05t0480000-02) |
Parent gene strand | + |
Alternative splicing | Os05g0480000_circ_g.1 Os05g0480000_circ_g.2 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os05t0480000-02:1 Os05t0480000-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.18314186 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |