Plant Circular RNA Database

Detail information of Os08g0200400_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os08g0200400_circ_g.1
					
						ID in PlantcircBase
						osa_circ_036299
					
						Alias
						Os08circ04812
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 5812280-5815381  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, SMALT, Segemehl
					
						Parent gene
						
							Os08g0200400						
					
						Parent gene annotation
						
							K Homology domain containing protein. (Os08t0200400-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os08g0200400_circ_g.2 Os08g0200400_circ_g.3 Os08g0200400_circ_g.4 						
					
						Support reads
						2/1
					
						Tissues
						leaf and panicle/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0200400-01:7

General Information
CircRNA Name	Os08g0200400_circ_g.1
ID in PlantcircBase	osa_circ_036299
Alias	Os08circ04812
Organism	Oryza sativa
Position	chr8: 5812280-5815381 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, SMALT, Segemehl
Parent gene	Os08g0200400
Parent gene annotation	K Homology domain containing protein. (Os08t0200400-01)
Parent gene strand	-
Alternative splicing	Os08g0200400_circ_g.2 Os08g0200400_circ_g.3 Os08g0200400_circ_g.4
Support reads	2/1
Tissues	leaf and panicle/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0200400-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGGCACGTGGCACTGGCCTCCTCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTT
GCTGAGGGCGTTTGCCAGTATGCCTCATTTCGTTAActttataatgttgtccaggtttgtgcca
tgtttccccattacttttgacaggccactagcaggaatagtcatttccatatgtggaggacgtc
tgaccaat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1678
Transcript exons: 5812280-5812370,5812760-5812815,5812915-5813196,5813268-
5813507,5813591-5814091,5814798-5814943,5815020-5815381
CTTTATAATGTTGTCCAGGTTTGTGCCATGTTTCCCCATTACTTTTGACAGGCCACTAGCAGGA
ATAGTCATTTCCATATGTGGAGGACGTCCTCCATATCCCTTTGATGCATATGACGAGACTGCTG
AATAGCCATCATCTATAGCCTGCAAGGAGCTGTACCCATACAAACTGCTATGCGGATATACTTC
CAAACCACGTTCTATGTCACCCCTATGATCATAGCCCAGGGGAGTGATCTGTTGTCTGTAAGGT
AATAATGCAGGCAAAGGATAACTGCTTGCATACAAAGGATCAGTAGTGGCAACAGTTAGCTTCC
CATCTTTCTCAGAATTTTGCCTGTCCACACTGTCCCTCAAAACATCATCCCTGAGTCTTAAAAC
TATCTGTACAAGAGCATCACGCAGATTTTCCACTTCTCCAAACACCTCGACAAGCTCATCACTG
GAAGATGCCTTCCGTGGTTTTTCACCCTTTGATATGTAGATAGCTGCCTTAGTCTTACTCCGCA
TGTCATTGACAATCGAACCGCCCTTGCCAATAAGACAGCCTATTACCTTACCTGGAACAAGAAG
GCGAAGATTCATTTTACCTTCATTGTCATCATTGATCTTCGATTGCAGAAGCAGAACAGCTTCC
ACTGCTGCAGACTTAGCATCATCGGTGGCCTCATTGGATGTAATGGTGATTATACTTTCCTCTC
GGTCATTTTTTGAGTCATCAACATCTATCCTTGCACCACTCTCTTTCCTTATACTCTTTATGGT
CACCCCACCTTTACCAATAACCAACCCAATCTTGCCAGCAGGGCATAAAACACGCAATACTAGC
TCCCCAGAACATTTCGGTGTATTATAAGCAGGAATTACAGGAAGCACAGATTGGTAAATGGGCA
GTCGACTATGAGCATCAGCCGATACTGTAAGTTCAGGAACATGAGGTGTTGACCCTAAGATTGA
TAGACTTGGATGTCCAGAAGATATGGCAGCATCAGAGGGTGAGTAGAAGTTACTAGATGGGTAA
ACAGGAAGCTCAGAAGGAACTATAATGCTTGGAGGAAGGTCTGAAACAGAAGTTTCAAGAGGAA
TGGTCTCTTTTGATGGGCACTTGTAAATGATGGTTGATACTGCAAATAGTGCCTTTCTGACAGC
TCTAGCATCACCGGTTATCTGAACAAAATTATCAAAGCTCATAGCACATGAATGTGTAACTTCA
TTTGGATCTTTTGGGCTCACTTTAATAAATGCTTTCGAAGTTGACCGAAGCCTCTTGATGACAG
CACCAGACTTTCCTATGACACTTGCAGATTGACTAGCTTGAGTAATGCATCTTGTGCTGTGCAA
ACAGGCTCCCTGTCATCGTCGTCATTAACATCTAGGTTTCTATGCTTGACAAAACAATATACCA
AAATAACCCTCTTGTCTGCACCAGGGTGAGGGTCGACAACCTTGACTTTAGCACTCGTCTGTTG
TCGGATAGAGTTTATCACCTTGCCGTTCTTGCCAATTACATTACCTATTACTCTGTCCGGACAG
AGTATGCGGTAAACAACCAATTCATCATTACCAGAGTTTTCCTGGGCACGTGGCACTGGCCTCC
TCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTTGCTGAGGGCGTTTGCCAGTATG
CCTCATTTCGTTAA
						
					

						Genomic sequence
						
							CTTTATAATGTTGTCCAGGTTTGTGCCATGTTTCCCCATTACTTTTGACAGGCCACTAGCAGGA
ATAGTCATTTCCATATGTGGAGGACGTCTGACCAATGGTAGTTAGCGAAGAGGATTAAAACAGG
AAGGATCAGATACCAAGTGCTCCCTCTGTCCCAAATTATAAGGCCTATATTTTTTTGCACGGTC
TTCAATAACATACTTTAACCAGTATTTTATTTCATTATATGATCCCAACAAATATGAAATTAGC
AACACATGAAAGTACTTCAAAATATGAAGTGATATAACACGCATAATATTTAGTATAGATATAG
CTAGTATGATTATTAGTCAAAAGATACCGAGTTTGATTTTACTTAAAAAGGGGCACCCTATAAT
TTGGGACGGAGGGAGTAATAATTAAAACGAATTATTAAATGGAAGAATAAGCAGTACTTGAGAT
CAGGGTTCATGGGAAGTTCTGTTCCAACATACCCTCCATATCCCTTTGATGCATATGACGAGAC
TGCTGAATAGCCATCATCTATAGCCTGATGGAAAATTATCATTGGCTAAGCTGATATCACAAAA
TTCAATATAAAGATTAAAGGAGAAACAAGTATAATTGAAGTTAAACTAAAATGGTGTACCTGCA
AGGAGCTGTACCCATACAAACTGCTATGCGGATATACTTCCAAACCACGTTCTATGTCACCCCT
ATGATCATAGCCCAGGGGAGTGATCTGTTGTCTGTAAGGTAATAATGCAGGCAAAGGATAACTG
CTTGCATACAAAGGATCAGTAGTGGCAACAGTTAGCTTCCCATCTTTCTCAGAATTTTGCCTGT
CCACACTGTCCCTCAAAACATCATCCCTGAGTCTTAAAACTATCTGTACAAGAGCATCACGCAG
ATTTTCCACTTCTCCAAACACCTACATGCAATGACAATTTAGACCCAAGCTATCACAGTAACAG
ACTCTTTTTAAATGGTAAAATGAGATACCTCGACAAGCTCATCACTGGAAGATGCCTTCCGTGG
TTTTTCACCCTTTGATATGTAGATAGCTGCCTTAGTCTTACTCCGCATGTCATTGACAATCGAA
CCGCCCTTGCCAATAAGACAGCCTATTACCTTACCTGGAACAAGAAGGCGAAGATTCATTTTAC
CTTCATTGTCATCATTGATCTTCGATTGCAGAAGCAGAACAGCTTCCACTGCTGCAGACTTAGC
ATCATCGGTGGCCTGAAACAGAAGGTAACACCCCAAATAAAACACCACACTGTAGGGCAGAACC
AACATAACTTTAGAAGGAAGCGTGATCTAACCTCATTGGATGTAATGGTGATTATACTTTCCTC
TCGGTCATTTTTTGAGTCATCAACATCTATCCTTGCACCACTCTCTTTCCTTATACTCTTTATG
GTCACCCCACCTTTACCAATAACCAACCCAATCTTGCCAGCAGGGCATAAAACACGCAATACTA
GCTCCCCAGAACATTTCGGTGTATTATAAGCAGGAATTACAGGAAGCACAGATTGGTAAATGGG
CAGTCGACTATGAGCATCAGCCGATACTGTAAGTTCAGGAACATGAGGTGTTGACCCTAAGATT
GATAGACTTGGATGTCCAGAAGATATGGCAGCATCAGAGGGTGAGTAGAAGTTACTAGATGGGT
AAACAGGAAGCTCAGAAGGAACTATAATGCTTGGAGGAAGGTCTGAAACAGAAGTTTCAAGAGG
AATGGTCTCTTTTGATGGGCACTTGTAAATGATGGTTGATACTGCAAATAGTGCCTTTCTGACA
GCTCTAGCATCACCGGTTATCTGTTTAGCATATATACATTACACATAGCAATTAAAGAACATAT
ATATGGAAACACATCATGGATATTGCAGAAAGTGGAACTTAAAAAGAGTGGTTACAAATTGTTA
AGCATGATACAGTATAAAGGTGTGTACAACACAAAGTATGATAAACAAATAAAGAACAAAATCT
GATAGAAAGGCATTTAGCTTCAGAGCTGCATTTACTGAACAGATTGTAGGTATTCAAAATATTG
TACTGGCATGTTGTAACTAATAAGATCTTTATTCTTTTTATATGTGTTGGTGGTGACTGCAAGC
TTTACACCAATCCTCTCACTCCATAAGTTATATGGCTCTGAATAAACTTAGGCATGTATATTGT
TTGCAGGATCTTTTCTTTAAAAAATGGATTCCTCGCAAATGTCTATACGTAGGTGGCTAATTGA
TCTTATGCAATGATGTATACAATTTCATGTTCGAGCGTAACTAAGTTTTACATTTTTAAAATTT
ACAATTTATAGCATATTTGTTTGGCAAATGCCATAATGCATGGTCACTCACAAACAAAGAATAT
ATATGATGATATTATTACAAGTCGTATGAAAGTCAAGGAAATTACTGCAAATATGCTGCTCAAT
ATCCTCAAACTGTTCAATAATTGTTAATCTCCTATTATGTTGGCAAATGATTTAAATTAAGAAA
AGTAAAAGATGTGAGAAATTACCTGAACAAAATTATCAAAGCTCATAGCACATGAATGTGTAAC
TTCATTTGGATCTTTTGGGCTCACTTTAATAAATGCTTTCGAAGTTGACCGAAGCCTCTTGATG
ACAGCACCAGACTTTCCTATGACACTTGCAGATTGACTAGCTGGTACAAGGATATTTGCTTCTT
CATCATCAGAGTCCCTAGTGATGGACAGAGCATCAACAATTGCATCATGTACCTTGAGTAATGC
ATCTTGTGCTGTGCAAACAGGCTCCCTGTCATCGTCGTCATTAACATCTAGGTTTCTATGCTTG
ACAAAACAATATACCAAAATAACCCTCTTGTCTGCACCAGGGTGAGGGTCGACAACCTTGACTT
TAGCACTCGTCTGTTGTCGGATAGAGTTTATCACCTTGCCGTTCTTGCCAATTACATTACCTAT
TACTCTGTCCGGACAGAGTATGCGGTAAACAACCAATTCATCATTACCAGAGTTTTCCTGGGCA
CGTGGCACTGGCCTCCTCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTTGCTGAG
GGCGTTTGCCAGTATGCCTCATTTCGTTAA
						
					

			
		

Sequences
Splice junction sequence	TGGGCACGTGGCACTGGCCTCCTCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTT GCTGAGGGCGTTTGCCAGTATGCCTCATTTCGTTAActttataatgttgtccaggtttgtgcca tgtttccccattacttttgacaggccactagcaggaatagtcatttccatatgtggaggacgtc tgaccaat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1678 Transcript exons: 5812280-5812370,5812760-5812815,5812915-5813196,5813268- 5813507,5813591-5814091,5814798-5814943,5815020-5815381 CTTTATAATGTTGTCCAGGTTTGTGCCATGTTTCCCCATTACTTTTGACAGGCCACTAGCAGGA ATAGTCATTTCCATATGTGGAGGACGTCCTCCATATCCCTTTGATGCATATGACGAGACTGCTG AATAGCCATCATCTATAGCCTGCAAGGAGCTGTACCCATACAAACTGCTATGCGGATATACTTC CAAACCACGTTCTATGTCACCCCTATGATCATAGCCCAGGGGAGTGATCTGTTGTCTGTAAGGT AATAATGCAGGCAAAGGATAACTGCTTGCATACAAAGGATCAGTAGTGGCAACAGTTAGCTTCC CATCTTTCTCAGAATTTTGCCTGTCCACACTGTCCCTCAAAACATCATCCCTGAGTCTTAAAAC TATCTGTACAAGAGCATCACGCAGATTTTCCACTTCTCCAAACACCTCGACAAGCTCATCACTG GAAGATGCCTTCCGTGGTTTTTCACCCTTTGATATGTAGATAGCTGCCTTAGTCTTACTCCGCA TGTCATTGACAATCGAACCGCCCTTGCCAATAAGACAGCCTATTACCTTACCTGGAACAAGAAG GCGAAGATTCATTTTACCTTCATTGTCATCATTGATCTTCGATTGCAGAAGCAGAACAGCTTCC ACTGCTGCAGACTTAGCATCATCGGTGGCCTCATTGGATGTAATGGTGATTATACTTTCCTCTC GGTCATTTTTTGAGTCATCAACATCTATCCTTGCACCACTCTCTTTCCTTATACTCTTTATGGT CACCCCACCTTTACCAATAACCAACCCAATCTTGCCAGCAGGGCATAAAACACGCAATACTAGC TCCCCAGAACATTTCGGTGTATTATAAGCAGGAATTACAGGAAGCACAGATTGGTAAATGGGCA GTCGACTATGAGCATCAGCCGATACTGTAAGTTCAGGAACATGAGGTGTTGACCCTAAGATTGA TAGACTTGGATGTCCAGAAGATATGGCAGCATCAGAGGGTGAGTAGAAGTTACTAGATGGGTAA ACAGGAAGCTCAGAAGGAACTATAATGCTTGGAGGAAGGTCTGAAACAGAAGTTTCAAGAGGAA TGGTCTCTTTTGATGGGCACTTGTAAATGATGGTTGATACTGCAAATAGTGCCTTTCTGACAGC TCTAGCATCACCGGTTATCTGAACAAAATTATCAAAGCTCATAGCACATGAATGTGTAACTTCA TTTGGATCTTTTGGGCTCACTTTAATAAATGCTTTCGAAGTTGACCGAAGCCTCTTGATGACAG CACCAGACTTTCCTATGACACTTGCAGATTGACTAGCTTGAGTAATGCATCTTGTGCTGTGCAA ACAGGCTCCCTGTCATCGTCGTCATTAACATCTAGGTTTCTATGCTTGACAAAACAATATACCA AAATAACCCTCTTGTCTGCACCAGGGTGAGGGTCGACAACCTTGACTTTAGCACTCGTCTGTTG TCGGATAGAGTTTATCACCTTGCCGTTCTTGCCAATTACATTACCTATTACTCTGTCCGGACAG AGTATGCGGTAAACAACCAATTCATCATTACCAGAGTTTTCCTGGGCACGTGGCACTGGCCTCC TCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTTGCTGAGGGCGTTTGCCAGTATG CCTCATTTCGTTAA
Genomic sequence	CTTTATAATGTTGTCCAGGTTTGTGCCATGTTTCCCCATTACTTTTGACAGGCCACTAGCAGGA ATAGTCATTTCCATATGTGGAGGACGTCTGACCAATGGTAGTTAGCGAAGAGGATTAAAACAGG AAGGATCAGATACCAAGTGCTCCCTCTGTCCCAAATTATAAGGCCTATATTTTTTTGCACGGTC TTCAATAACATACTTTAACCAGTATTTTATTTCATTATATGATCCCAACAAATATGAAATTAGC AACACATGAAAGTACTTCAAAATATGAAGTGATATAACACGCATAATATTTAGTATAGATATAG CTAGTATGATTATTAGTCAAAAGATACCGAGTTTGATTTTACTTAAAAAGGGGCACCCTATAAT TTGGGACGGAGGGAGTAATAATTAAAACGAATTATTAAATGGAAGAATAAGCAGTACTTGAGAT CAGGGTTCATGGGAAGTTCTGTTCCAACATACCCTCCATATCCCTTTGATGCATATGACGAGAC TGCTGAATAGCCATCATCTATAGCCTGATGGAAAATTATCATTGGCTAAGCTGATATCACAAAA TTCAATATAAAGATTAAAGGAGAAACAAGTATAATTGAAGTTAAACTAAAATGGTGTACCTGCA AGGAGCTGTACCCATACAAACTGCTATGCGGATATACTTCCAAACCACGTTCTATGTCACCCCT ATGATCATAGCCCAGGGGAGTGATCTGTTGTCTGTAAGGTAATAATGCAGGCAAAGGATAACTG CTTGCATACAAAGGATCAGTAGTGGCAACAGTTAGCTTCCCATCTTTCTCAGAATTTTGCCTGT CCACACTGTCCCTCAAAACATCATCCCTGAGTCTTAAAACTATCTGTACAAGAGCATCACGCAG ATTTTCCACTTCTCCAAACACCTACATGCAATGACAATTTAGACCCAAGCTATCACAGTAACAG ACTCTTTTTAAATGGTAAAATGAGATACCTCGACAAGCTCATCACTGGAAGATGCCTTCCGTGG TTTTTCACCCTTTGATATGTAGATAGCTGCCTTAGTCTTACTCCGCATGTCATTGACAATCGAA CCGCCCTTGCCAATAAGACAGCCTATTACCTTACCTGGAACAAGAAGGCGAAGATTCATTTTAC CTTCATTGTCATCATTGATCTTCGATTGCAGAAGCAGAACAGCTTCCACTGCTGCAGACTTAGC ATCATCGGTGGCCTGAAACAGAAGGTAACACCCCAAATAAAACACCACACTGTAGGGCAGAACC AACATAACTTTAGAAGGAAGCGTGATCTAACCTCATTGGATGTAATGGTGATTATACTTTCCTC TCGGTCATTTTTTGAGTCATCAACATCTATCCTTGCACCACTCTCTTTCCTTATACTCTTTATG GTCACCCCACCTTTACCAATAACCAACCCAATCTTGCCAGCAGGGCATAAAACACGCAATACTA GCTCCCCAGAACATTTCGGTGTATTATAAGCAGGAATTACAGGAAGCACAGATTGGTAAATGGG CAGTCGACTATGAGCATCAGCCGATACTGTAAGTTCAGGAACATGAGGTGTTGACCCTAAGATT GATAGACTTGGATGTCCAGAAGATATGGCAGCATCAGAGGGTGAGTAGAAGTTACTAGATGGGT AAACAGGAAGCTCAGAAGGAACTATAATGCTTGGAGGAAGGTCTGAAACAGAAGTTTCAAGAGG AATGGTCTCTTTTGATGGGCACTTGTAAATGATGGTTGATACTGCAAATAGTGCCTTTCTGACA GCTCTAGCATCACCGGTTATCTGTTTAGCATATATACATTACACATAGCAATTAAAGAACATAT ATATGGAAACACATCATGGATATTGCAGAAAGTGGAACTTAAAAAGAGTGGTTACAAATTGTTA AGCATGATACAGTATAAAGGTGTGTACAACACAAAGTATGATAAACAAATAAAGAACAAAATCT GATAGAAAGGCATTTAGCTTCAGAGCTGCATTTACTGAACAGATTGTAGGTATTCAAAATATTG TACTGGCATGTTGTAACTAATAAGATCTTTATTCTTTTTATATGTGTTGGTGGTGACTGCAAGC TTTACACCAATCCTCTCACTCCATAAGTTATATGGCTCTGAATAAACTTAGGCATGTATATTGT TTGCAGGATCTTTTCTTTAAAAAATGGATTCCTCGCAAATGTCTATACGTAGGTGGCTAATTGA TCTTATGCAATGATGTATACAATTTCATGTTCGAGCGTAACTAAGTTTTACATTTTTAAAATTT ACAATTTATAGCATATTTGTTTGGCAAATGCCATAATGCATGGTCACTCACAAACAAAGAATAT ATATGATGATATTATTACAAGTCGTATGAAAGTCAAGGAAATTACTGCAAATATGCTGCTCAAT ATCCTCAAACTGTTCAATAATTGTTAATCTCCTATTATGTTGGCAAATGATTTAAATTAAGAAA AGTAAAAGATGTGAGAAATTACCTGAACAAAATTATCAAAGCTCATAGCACATGAATGTGTAAC TTCATTTGGATCTTTTGGGCTCACTTTAATAAATGCTTTCGAAGTTGACCGAAGCCTCTTGATG ACAGCACCAGACTTTCCTATGACACTTGCAGATTGACTAGCTGGTACAAGGATATTTGCTTCTT CATCATCAGAGTCCCTAGTGATGGACAGAGCATCAACAATTGCATCATGTACCTTGAGTAATGC ATCTTGTGCTGTGCAAACAGGCTCCCTGTCATCGTCGTCATTAACATCTAGGTTTCTATGCTTG ACAAAACAATATACCAAAATAACCCTCTTGTCTGCACCAGGGTGAGGGTCGACAACCTTGACTT TAGCACTCGTCTGTTGTCGGATAGAGTTTATCACCTTGCCGTTCTTGCCAATTACATTACCTAT TACTCTGTCCGGACAGAGTATGCGGTAAACAACCAATTCATCATTACCAGAGTTTTCCTGGGCA CGTGGCACTGGCCTCCTCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTTGCTGAG GGCGTTTGCCAGTATGCCTCATTTCGTTAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007592* osi_circ_018300 						
					
						PMCS
						0.164702114

Conservation Information
Conserved circRNAs	osi_circ_007592* osi_circ_018300
PMCS	0.164702114

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							5815090-5812798(+)
5814823-5815372(-)
						
						Potential amino acid sequence
						
							MLDKTIYQNNPLVCTRVRVDNLDFSTRLLSDRVYHLAVLANYITYYSVRTEYAVNNQFIITRVF
LGTWHWPPLLVPPFFSVMVPVLLRAFASMPHFVNFIMLSRFVPCFPITFDRPLAGIVISICGGR
PPYPFDAYDETAE*(+)
MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNFY
SPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSGELVLRVLC
PAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSAAVEAVLLLQ
SKINDDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEV
FGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQIT
PLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSK
VMGKHGTNLDNIIKLTK*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	5815090-5812798(+) 5814823-5815372(-)
Potential amino acid sequence	MLDKTIYQNNPLVCTRVRVDNLDFSTRLLSDRVYHLAVLANYITYYSVRTEYAVNNQFIITRVF LGTWHWPPLLVPPFFSVMVPVLLRAFASMPHFVNFIMLSRFVPCFPITFDRPLAGIVISICGGR PPYPFDAYDETAE(+) MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNFY SPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSGELVLRVLC PAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSAAVEAVLLLQ SKINDDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEV FGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQIT PLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSK VMGKHGTNLDNIIKLTK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Chu et al., 2017

circRNA

Detail information of Os08g0200400_circ_g.1

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