Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA014298_circ_g.1 |
ID in PlantcircBase | osi_circ_014904 |
Alias | Chr04:32728635_32729478(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr4: 30997398-30998241 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRCexplorer2 |
Parent gene | BGIOSGA014298 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA017186_circ_ag.1 BGIOSGA017186_circ_g.1 BGIOSGA017186_circ_g.2 BGIOSGA017186_circ_g.3 BGIOSGA017186_circ_g.4 BGIOSGA017186_circ_g.5 BGIOSGA017186_circ_g.6 BGIOSGA014298_circ_g.2 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | BGIOSGA014298-TA:3 |
Conservation Information | |
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Conserved circRNAs | osa_circ_025460 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |