Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0121800_circ_g.1 |
ID in PlantcircBase | osa_circ_000177 |
Alias | Os_ciR5068 |
Organism | Oryza sativa |
Position | chr1: 1235489-1236500 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | Os01g0121800 |
Parent gene annotation |
Glycosyl transferase, family 14 protein. (Os01t0121800-01);Simil ar to xylosyltransferase 1. (Os01t0121800-02) |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3/1 |
Tissues | root/shoot, root |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os01t0121800-01:3 Os01t0121800-02:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_009375 |
PMCS | 0.381273147 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |