Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G15930_circ_g.2 |
ID in PlantcircBase | ath_circ_002834 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5472094-5472398 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G15930 |
Parent gene annotation |
40S ribosomal protein S12-1 |
Parent gene strand | + |
Alternative splicing | AT1G15930_circ_g.1 AT1G15930_circ_g.3 AT1G15930_circ_g.4 AT1G15930_circ_g.5 |
Support reads | 64 |
Tissues | whole_plant |
Exon boundary | No-Yes |
Splicing signals | GT-TT |
Number of exons covered | AT1G15930.2:1 AT1G15930.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.190801149 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |