Plant Circular RNA Database

Detail information of Zm00001d041692_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d041692_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007642
					
						Alias
						zma_circ_0001167
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 133566110-133569597  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d041692						
					
						Parent gene annotation
						
							Acyl-CoA-binding domain-containing protein 4
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d041692_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d041692_T001:12
Zm00001d041692_T002:11

General Information
CircRNA Name	Zm00001d041692_circ_g.1
ID in PlantcircBase	zma_circ_007642
Alias	zma_circ_0001167
Organism	Zea mays
Position	chr3: 133566110-133569597 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Zm00001d041692
Parent gene annotation	Acyl-CoA-binding domain-containing protein 4
Parent gene strand	+
Alternative splicing	Zm00001d041692_circ_g.2
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d041692_T001:12 Zm00001d041692_T002:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCAACTTCCATTTCTGTGTCCGGCTCTCTCTCTTATGCAGGAACTCCACTTAGTTCAAGATCAA
CTTTCTATCGAACAAACCAGGGCTTCCAAATTTGAGgctgccaaagaatcagtggccatgggat
ctgctatcctcaacagcattgcccccgaggagcctaaagtggtcgtgccagagtacggtgagac
ggctgata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1449
Transcript exons: 133566110-133566313,133566387-133566464,133566622-133566
732,133566845-133566911,133566992-133567053,133567189-13
3567328,133567640-133567766,133567841-133567955,13356815
3-133568241,133568675-133568821,133568903-133569151,1335
69538-133569597
GCTGCCAAAGAATCAGTGGCCATGGGATCTGCTATCCTCAACAGCATTGCCCCCGAGGAGCCTA
AAGTGGTCGTGCCAGAGTACGGTGAGACGGCTGATATCCAGGACAAGGAAGTTAGTATGGAACA
GCTCTGCTCCATAAGCACCTATGATCAGTGGACGCCACTCTCTGTTTCTGGCCAGCTTCCCAAA
CCACGCTATAAGCATGGAGCTGTGGTGATTCAGCAGAAGATGTATGTCTTTGGTGGAAACCACA
ATGGCCGTTACCTTGGCGACATTCAGGTTTTGGACTTCAAAACTTTGTCATGGTCAAAGCTGGA
AGCTAAATCACAAGCAGAACCATCAGAATCAGCTGGAGCAGTTCCGTTTTCTGCATGTGCTGGC
CATTCAGTGATTCAATGGGGAAATAAGATCCTATGTCTTGCAGGACATACCAGAGAACCTGCAG
AAAGTCTCAGTGTTAAGGAGTTTGATCCACAAACCTGCACTTGGTCTACCTTGCGTACTTATGG
AAGGTCACCTAGTTCACGTGGTGGTCAGTCAGTGACCCTTGTTGGAGACACTCTAGTGGTCTTT
GGCGGTGAAGGTCATGGGAGATCTCTTCTGAATGATCTGCACATTCTTGATCTTGAGACCATGA
CTTGGGATGAATTTGAGACCACAGGCACTCCCCCTTCCCCAAGGTCAGAGCATGCTGCTGCTTG
CTTTGCAGAGCGGTATCTTCTGATATTTGGCGGGGGTTCTCATTCTACATGTTTCAGTGACCTA
CACCTCCTTGACACTCAGACAATGGAATGGTCAAGACCAAAGCAACAAGGTGTTACTCCAGAAT
CAAGAGCAGGACATGCAGGTGTAACTATTGGAGAATATTGGTTTATTACTGGTGGTGGAAATAG
TAGGAAAGGTGTCTCAGATACTCTTGTACTCAACCTGTCTACGTATGAATGGTCAGTTCTCACT
AATCTTGAGGCCCGTGCACCCCCTGTAAGTGAGGCTTATGCTCTCAAGGCAAGTCTCAAACCAA
GTGTCCCATCTCAACAAATAAATGAATCAGATACAAATGGCTTTTCTCCCTTATCTGTGGCAGA
AAATTCTAGCAGGAAAGTCATATTTGAAATTGAGGAACTTAAAGATGAAAAGATTGTTTCTCTG
GTATGTTCATTAAAACATGCATTTTTCCACTATCAGCCTGGCAATAGGGCAGATAACAGCAAAA
CCTTGGGACAAGTAGTTATGGTTGAACAAAACGAAATAGAAAACAGACTTAATCAAGAGCACTT
GCAGAGTCTCCGCCTGAAGCAGGAACTAACTGGTCTTGAGAACAGAAATGCAGAACTTACTGAG
GCAAGCTATATCTCACTTACCAAATTGTGCAAAACTGCAGAGAATGAACTCCACTTAGTTCAAG
ATCAACTTTCTATCGAACAAACCAGGGCTTCCAAATTTGAG
						
					

						Genomic sequence
						
							GCTGCCAAAGAATCAGTGGCCATGGGATCTGCTATCCTCAACAGCATTGCCCCCGAGGAGCCTA
AAGTGGTCGTGCCAGAGTACGGTGAGACGGCTGATATCCAGGACAAGGAAGTTAGTATGGAACA
GCTCTGCTCCATAAGCACCTATGATCAGTGGACGCCACTCTCTGTTTCTGGCCAGCTTCCCAAA
CCACGCTATAAGGTCTACTTCGGTTGTCTTGACTGCCTAATTTCACTTAGCTCATTTAGTGACC
TGTTGTCTGTGATGACTGCAGCATGGAGCTGTGGTGATTCAGCAGAAGATGTATGTCTTTGGTG
GAAACCACAATGGCCGTTACCTTGGCGACATTCAGGTAAATTGTTCATCAAGATGTTGTATTTA
TTAATAGCTGCATTTATGGGCAGGCATTCTCACAACCATCTTGAATTGAGATGTTGTACTGAGC
CAGCACCTTCATCTTACTGACAATGCCATGGATCTTAACATCGGGAATCCTTTTCTGATTAAAG
GTTTTGGACTTCAAAACTTTGTCATGGTCAAAGCTGGAAGCTAAATCACAAGCAGAACCATCAG
AATCAGCTGGAGCAGTTCCGTTTTCTGCATGTGCTGGCCATTCAGTGGTAATCACCAAAAGCTC
TTTTCACTCAAGTCTTAGGGAATCAGCCAGTTTTATCCCAGTTGGTTAGCTTATAACTGTATAT
TGTATTTGCATCTGTCTTTAATATCTTTCAGATTCAATGGGGAAATAAGATCCTATGTCTTGCA
GGACATACCAGAGAACCTGCAGAAAGTCTCAGTGGTTAGGCTAATATTCCACTCATCTTTTGCT
ATTCATTTATCAGTGTCTTAGTTCTTATTTCTTATGCGCATTTATGACAGTTAAGGAGTTTGAT
CCACAAACCTGCACTTGGTCTACCTTGCGTACTTATGGAAGGTCACCTGTATGATTATGCTTTT
CTGTGTTTTATTGCCAAAGCTTCTATAGTATTTATACAAATTAGCTTGTTACCTGAAGCTTGCT
TTTGTTTTTCGTTGTTTTCCCCCAAATCTGTGATGAATTTTCCTATTTCCTTTAGAGTTCACGT
GGTGGTCAGTCAGTGACCCTTGTTGGAGACACTCTAGTGGTCTTTGGCGGTGAAGGTCATGGGA
GATCTCTTCTGAATGATCTGCACATTCTTGATCTTGAGACCATGACTTGGGATGAATTTGAGAC
CACGTAAGCTCTGTGAAGTAAATTTAATTTGAATTGGTTGATTTGTATTAGAAATGGTTTAGGT
AAAAGTAAAACTGTAAGTGTGGATGTGTTTTTATGCACTGGTCTCTACTGGATAGAATTCTTAG
CCTTCCTGTTTATGTTGAACTGGTTCCTTATATAATTGTGGAGAACCGAAACTTCATAATTTGC
TTGCAGTTGCAGCTGGTAATACATTTGGTCTAGGACATGGAATAAACTTGTATTATTCTTGCTC
TGCTTTGAGGTGCAGGATTAATATCTGACTGTTTTCAAATTATGCTGTTGCTCTCCAGAGGCAC
TCCCCCTTCCCCAAGGTCAGAGCATGCTGCTGCTTGCTTTGCAGAGCGGTATCTTCTGATATTT
GGCGGGGGTTCTCATTCTACATGTTTCAGTGACCTACACCTCCTTGACACTCAGACAGTAAGAA
TATTTTTTGCTCTAAAACTGCTATGTAATCCTTTTGGGAGTCCAAATGAATCACTTGGTCGTTA
CAGATGGAATGGTCAAGACCAAAGCAACAAGGTGTTACTCCAGAATCAAGAGCAGGACATGCAG
GTGTAACTATTGGAGAATATTGGTTTATTACTGGTGGTGGAAATAGTAGGAAAGGTAAGGTTGA
GATGTCTGACAGTTTTATTACATAATGATTTATGACTTATAACTCAACCAATTTTCTATGGCAT
AGATATCAGGCTTGTCTATGTTAGTTTAGTTGTGTTAATCATTTTATTTTCTCTTTATATCATT
TAATTTTCTAAAAAATATCATAAAACAAATCCAGTTTGCATGCGCCCAATCTACTGCAGGTGTC
TCAGATACTCTTGTACTCAACCTGTCTACGTATGAATGGTCAGTTCTCACTAATCTTGAGGCCC
GTGCACCCCCTGTAAGTGAGGTGAGCTCATTGATATTCTGCGTACTCTAGTCACTCGAATTTTT
TTAGTATTTTCAACTAAGGAAAAAACTTGCTTCTGGTTTGAAGTTTAAATTCTAACTCAATCAA
GGTGACCATATATGGATTTAAGTCTCTCATGATGGGGAAACTCATCTGGTCTAATAAATTGCCT
TTTTTAGAAAGTTATATACTCACAATTATTCATTGATTGTACTAATTTGTTAGGTAATCTTGCT
GTTAGCCTGTTACTGATATTCAGAGGCATGTTTATGACAGGGCTCAAGTTTAGTAATGCACACA
ATTAATGGAGAAAATTTTCTGGTGTCATTTGGAGGATATAGTGGCCGTTATAGTAATCAGGCAT
GCTTTTCTATGATCACTCTAGTGTTTTTAACGTGCCCTTCTATTCAGCTGAGCAATTCTTTTTG
TTTAGGCTTATGCTCTCAAGGCAAGTCTCAAACCAAGTGTCCCATCTCAACAAATAAATGAATC
AGATACAAATGGCTTTTCTCCCTTATCTGTGGCAGAAAATTCTAGCAGGAAAGTCATATTTGAA
ATTGAGGAACTTAAAGATGAAAAGGTAATGTAATGTTTGGATGCATAAACACAGTTCCTGTTCT
TTTTTATTCTTAATAACTTTTTCCATAAACACAACTTCTAGATTGTTTCTCTGGTATGTTCATT
AAAACATGCATTTTTCCACTATCAGCCTGGCAATAGGGCAGATAACAGCAAAACCTTGGGACAA
GTAGTTATGGTTGAACAAAACGAAATAGAAAACAGACTTAATCAAGAGCACTTGCAGAGTCTCC
GCCTGAAGCAGGAACTAACTGGTCTTGAGAACAGAAATGCAGAACTTACTGAGGCAAGCTATAT
CTCACTTACCAAATTGTGCAAAACTGCAGAGAATGTAGATAATATTTACTTACAGGCTACTACT
AATGCTTAAGTGATGTTGTACTTGCATTGCATGTTGATCTCTTTGTCTATGACCTCTGTAGAAA
TATCTTGTGATTGCCCATTTCAGTCAAAACTTAAGGTTGAACATGATAGAAAATCTTTCAAATC
AATGCACCTCAATGAAGTTATAGGTTGCTACTGCTTTGTATTGTGTCAAATATTGTACTTGAAT
CGAGTTCTTAGAAATGACAAATCATGAAACAAGGACATATACACATACAAGAGAATCGCAACAC
ACGATATATTGATGGCAACTGTCACTTTATGAGGAAGAAACATGCTTTTCAGCTCAGTGATCAA
CTTCCATTTCTGTGTCCGGCTCTCTCTCTTATGCAGGAACTCCACTTAGTTCAAGATCAACTTT
CTATCGAACAAACCAGGGCTTCCAAATTTGAG
						
					

			
		

Sequences
Splice junction sequence	TCAACTTCCATTTCTGTGTCCGGCTCTCTCTCTTATGCAGGAACTCCACTTAGTTCAAGATCAA CTTTCTATCGAACAAACCAGGGCTTCCAAATTTGAGgctgccaaagaatcagtggccatgggat ctgctatcctcaacagcattgcccccgaggagcctaaagtggtcgtgccagagtacggtgagac ggctgata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1449 Transcript exons: 133566110-133566313,133566387-133566464,133566622-133566 732,133566845-133566911,133566992-133567053,133567189-13 3567328,133567640-133567766,133567841-133567955,13356815 3-133568241,133568675-133568821,133568903-133569151,1335 69538-133569597 GCTGCCAAAGAATCAGTGGCCATGGGATCTGCTATCCTCAACAGCATTGCCCCCGAGGAGCCTA AAGTGGTCGTGCCAGAGTACGGTGAGACGGCTGATATCCAGGACAAGGAAGTTAGTATGGAACA GCTCTGCTCCATAAGCACCTATGATCAGTGGACGCCACTCTCTGTTTCTGGCCAGCTTCCCAAA CCACGCTATAAGCATGGAGCTGTGGTGATTCAGCAGAAGATGTATGTCTTTGGTGGAAACCACA ATGGCCGTTACCTTGGCGACATTCAGGTTTTGGACTTCAAAACTTTGTCATGGTCAAAGCTGGA AGCTAAATCACAAGCAGAACCATCAGAATCAGCTGGAGCAGTTCCGTTTTCTGCATGTGCTGGC CATTCAGTGATTCAATGGGGAAATAAGATCCTATGTCTTGCAGGACATACCAGAGAACCTGCAG AAAGTCTCAGTGTTAAGGAGTTTGATCCACAAACCTGCACTTGGTCTACCTTGCGTACTTATGG AAGGTCACCTAGTTCACGTGGTGGTCAGTCAGTGACCCTTGTTGGAGACACTCTAGTGGTCTTT GGCGGTGAAGGTCATGGGAGATCTCTTCTGAATGATCTGCACATTCTTGATCTTGAGACCATGA CTTGGGATGAATTTGAGACCACAGGCACTCCCCCTTCCCCAAGGTCAGAGCATGCTGCTGCTTG CTTTGCAGAGCGGTATCTTCTGATATTTGGCGGGGGTTCTCATTCTACATGTTTCAGTGACCTA CACCTCCTTGACACTCAGACAATGGAATGGTCAAGACCAAAGCAACAAGGTGTTACTCCAGAAT CAAGAGCAGGACATGCAGGTGTAACTATTGGAGAATATTGGTTTATTACTGGTGGTGGAAATAG TAGGAAAGGTGTCTCAGATACTCTTGTACTCAACCTGTCTACGTATGAATGGTCAGTTCTCACT AATCTTGAGGCCCGTGCACCCCCTGTAAGTGAGGCTTATGCTCTCAAGGCAAGTCTCAAACCAA GTGTCCCATCTCAACAAATAAATGAATCAGATACAAATGGCTTTTCTCCCTTATCTGTGGCAGA AAATTCTAGCAGGAAAGTCATATTTGAAATTGAGGAACTTAAAGATGAAAAGATTGTTTCTCTG GTATGTTCATTAAAACATGCATTTTTCCACTATCAGCCTGGCAATAGGGCAGATAACAGCAAAA CCTTGGGACAAGTAGTTATGGTTGAACAAAACGAAATAGAAAACAGACTTAATCAAGAGCACTT GCAGAGTCTCCGCCTGAAGCAGGAACTAACTGGTCTTGAGAACAGAAATGCAGAACTTACTGAG GCAAGCTATATCTCACTTACCAAATTGTGCAAAACTGCAGAGAATGAACTCCACTTAGTTCAAG ATCAACTTTCTATCGAACAAACCAGGGCTTCCAAATTTGAG
Genomic sequence	GCTGCCAAAGAATCAGTGGCCATGGGATCTGCTATCCTCAACAGCATTGCCCCCGAGGAGCCTA AAGTGGTCGTGCCAGAGTACGGTGAGACGGCTGATATCCAGGACAAGGAAGTTAGTATGGAACA GCTCTGCTCCATAAGCACCTATGATCAGTGGACGCCACTCTCTGTTTCTGGCCAGCTTCCCAAA CCACGCTATAAGGTCTACTTCGGTTGTCTTGACTGCCTAATTTCACTTAGCTCATTTAGTGACC TGTTGTCTGTGATGACTGCAGCATGGAGCTGTGGTGATTCAGCAGAAGATGTATGTCTTTGGTG GAAACCACAATGGCCGTTACCTTGGCGACATTCAGGTAAATTGTTCATCAAGATGTTGTATTTA TTAATAGCTGCATTTATGGGCAGGCATTCTCACAACCATCTTGAATTGAGATGTTGTACTGAGC CAGCACCTTCATCTTACTGACAATGCCATGGATCTTAACATCGGGAATCCTTTTCTGATTAAAG GTTTTGGACTTCAAAACTTTGTCATGGTCAAAGCTGGAAGCTAAATCACAAGCAGAACCATCAG AATCAGCTGGAGCAGTTCCGTTTTCTGCATGTGCTGGCCATTCAGTGGTAATCACCAAAAGCTC TTTTCACTCAAGTCTTAGGGAATCAGCCAGTTTTATCCCAGTTGGTTAGCTTATAACTGTATAT TGTATTTGCATCTGTCTTTAATATCTTTCAGATTCAATGGGGAAATAAGATCCTATGTCTTGCA GGACATACCAGAGAACCTGCAGAAAGTCTCAGTGGTTAGGCTAATATTCCACTCATCTTTTGCT ATTCATTTATCAGTGTCTTAGTTCTTATTTCTTATGCGCATTTATGACAGTTAAGGAGTTTGAT CCACAAACCTGCACTTGGTCTACCTTGCGTACTTATGGAAGGTCACCTGTATGATTATGCTTTT CTGTGTTTTATTGCCAAAGCTTCTATAGTATTTATACAAATTAGCTTGTTACCTGAAGCTTGCT TTTGTTTTTCGTTGTTTTCCCCCAAATCTGTGATGAATTTTCCTATTTCCTTTAGAGTTCACGT GGTGGTCAGTCAGTGACCCTTGTTGGAGACACTCTAGTGGTCTTTGGCGGTGAAGGTCATGGGA GATCTCTTCTGAATGATCTGCACATTCTTGATCTTGAGACCATGACTTGGGATGAATTTGAGAC CACGTAAGCTCTGTGAAGTAAATTTAATTTGAATTGGTTGATTTGTATTAGAAATGGTTTAGGT AAAAGTAAAACTGTAAGTGTGGATGTGTTTTTATGCACTGGTCTCTACTGGATAGAATTCTTAG CCTTCCTGTTTATGTTGAACTGGTTCCTTATATAATTGTGGAGAACCGAAACTTCATAATTTGC TTGCAGTTGCAGCTGGTAATACATTTGGTCTAGGACATGGAATAAACTTGTATTATTCTTGCTC TGCTTTGAGGTGCAGGATTAATATCTGACTGTTTTCAAATTATGCTGTTGCTCTCCAGAGGCAC TCCCCCTTCCCCAAGGTCAGAGCATGCTGCTGCTTGCTTTGCAGAGCGGTATCTTCTGATATTT GGCGGGGGTTCTCATTCTACATGTTTCAGTGACCTACACCTCCTTGACACTCAGACAGTAAGAA TATTTTTTGCTCTAAAACTGCTATGTAATCCTTTTGGGAGTCCAAATGAATCACTTGGTCGTTA CAGATGGAATGGTCAAGACCAAAGCAACAAGGTGTTACTCCAGAATCAAGAGCAGGACATGCAG GTGTAACTATTGGAGAATATTGGTTTATTACTGGTGGTGGAAATAGTAGGAAAGGTAAGGTTGA GATGTCTGACAGTTTTATTACATAATGATTTATGACTTATAACTCAACCAATTTTCTATGGCAT AGATATCAGGCTTGTCTATGTTAGTTTAGTTGTGTTAATCATTTTATTTTCTCTTTATATCATT TAATTTTCTAAAAAATATCATAAAACAAATCCAGTTTGCATGCGCCCAATCTACTGCAGGTGTC TCAGATACTCTTGTACTCAACCTGTCTACGTATGAATGGTCAGTTCTCACTAATCTTGAGGCCC GTGCACCCCCTGTAAGTGAGGTGAGCTCATTGATATTCTGCGTACTCTAGTCACTCGAATTTTT TTAGTATTTTCAACTAAGGAAAAAACTTGCTTCTGGTTTGAAGTTTAAATTCTAACTCAATCAA GGTGACCATATATGGATTTAAGTCTCTCATGATGGGGAAACTCATCTGGTCTAATAAATTGCCT TTTTTAGAAAGTTATATACTCACAATTATTCATTGATTGTACTAATTTGTTAGGTAATCTTGCT GTTAGCCTGTTACTGATATTCAGAGGCATGTTTATGACAGGGCTCAAGTTTAGTAATGCACACA ATTAATGGAGAAAATTTTCTGGTGTCATTTGGAGGATATAGTGGCCGTTATAGTAATCAGGCAT GCTTTTCTATGATCACTCTAGTGTTTTTAACGTGCCCTTCTATTCAGCTGAGCAATTCTTTTTG TTTAGGCTTATGCTCTCAAGGCAAGTCTCAAACCAAGTGTCCCATCTCAACAAATAAATGAATC AGATACAAATGGCTTTTCTCCCTTATCTGTGGCAGAAAATTCTAGCAGGAAAGTCATATTTGAA ATTGAGGAACTTAAAGATGAAAAGGTAATGTAATGTTTGGATGCATAAACACAGTTCCTGTTCT TTTTTATTCTTAATAACTTTTTCCATAAACACAACTTCTAGATTGTTTCTCTGGTATGTTCATT AAAACATGCATTTTTCCACTATCAGCCTGGCAATAGGGCAGATAACAGCAAAACCTTGGGACAA GTAGTTATGGTTGAACAAAACGAAATAGAAAACAGACTTAATCAAGAGCACTTGCAGAGTCTCC GCCTGAAGCAGGAACTAACTGGTCTTGAGAACAGAAATGCAGAACTTACTGAGGCAAGCTATAT CTCACTTACCAAATTGTGCAAAACTGCAGAGAATGTAGATAATATTTACTTACAGGCTACTACT AATGCTTAAGTGATGTTGTACTTGCATTGCATGTTGATCTCTTTGTCTATGACCTCTGTAGAAA TATCTTGTGATTGCCCATTTCAGTCAAAACTTAAGGTTGAACATGATAGAAAATCTTTCAAATC AATGCACCTCAATGAAGTTATAGGTTGCTACTGCTTTGTATTGTGTCAAATATTGTACTTGAAT CGAGTTCTTAGAAATGACAAATCATGAAACAAGGACATATACACATACAAGAGAATCGCAACAC ACGATATATTGATGGCAACTGTCACTTTATGAGGAAGAAACATGCTTTTCAGCTCAGTGATCAA CTTCCATTTCTGTGTCCGGCTCTCTCTCTTATGCAGGAACTCCACTTAGTTCAAGATCAACTTT CTATCGAACAAACCAGGGCTTCCAAATTTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.084444719

Conservation Information
Conserved circRNAs	NA
PMCS	0.084444719

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							133566132-133569594(+)
133566251-133569560(-)
						
					

						Potential amino acid sequence
						
							MGSAILNSIAPEEPKVVVPEYGETADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGA
VVIQQKMYVFGGNHNGRYLGDIQVLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWG
NKILCLAGHTREPAESLSVKEFDPQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGR
SLLNDLHILDLETMTWDEFETTGTPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQT
MEWSRPKQQGVTPESRAGHAGVTIGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAP
PVSEAYALKASLKPSVPSQQINESDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHA
FFHYQPGNRADNSKTLGQVVMVEQNEIENRLNQEHLQSLRLKQELTGLENRNAELTEASYISLT
KLCKTAENELHLVQDQLSIEQTRASKFEAAKESVAMGSAILNSIAPEEPKVVVPEYGETADIQD
KEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGAVVIQQKMYVFGGNHNGRYLGDIQVLDFKT
LSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWGNKILCLAGHTREPAESLSVKEFDPQTCTW
STLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGRSLLNDLHILDLETMTWDEFETTGTPPSPR
SEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQTMEWSRPKQQGVTPESRAGHAGVTIGEYWF
ITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAPPVSEAYALKASLKPSVPSQQINESDTNGF
SPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHAFFHYQPGNRADNSKTLGQVVMVEQNEIEN
RLNQEHLQSLRLKQELTGLENRNAELTEASYISLTKLCKTAENELHLVQDQLSIEQTRASKFEA
AKESVAMGSAILNSIAPEEPKVVVPEYGETADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKP
RYKHGAVVIQQKMYVFGGNHNGRYLGDIQVLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGH
SVIQWGNKILCLAGHTREPAESLSVKEFDPQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFG
GEGHGRSLLNDLHILDLETMTWDEFETTGTPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLH
LLDTQTMEWSRPKQQGVTPESRAGHAGVTIGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTN
LEARAPPVSEAYALKASLKPSVPSQQINESDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLV
CSLKHAFFHYQPGNRADNSKTLGQVVMVEQNEIENRLNQEHLQSLRLKQELTGLENRNAELTEA
SYISLTKLCKTAENELHLVQDQLSIEQTRASKFEAAKESVAMGSAILNSIAPEEPKVVVPEYGE
TADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGAVVIQQKMYVFGGNHNGRYLGDIQ
VLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWGNKILCLAGHTREPAESLSVKEFD
PQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGRSLLNDLHILDLETMTWDEFETTG
TPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQTMEWSRPKQQGVTPESRAGHAGVT
IGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAPPVSEAYALKASLKPSVPSQQINE
SDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHAFFHYQPGNRADNSKTLGQVVMVE
QNEIENRLNQEHLQSLRLKQELTGLENRNAELTEASYISLTKLCKTAENELHLVQDQLSIEQTR
ASKFE(+)
MEQSCSILTSLSWISAVSPYSGTTTLGSSGAMLLRIADPMATDSLAASNLEALVCSIES*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	133566132-133569594(+) 133566251-133569560(-)
Potential amino acid sequence	MGSAILNSIAPEEPKVVVPEYGETADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGA VVIQQKMYVFGGNHNGRYLGDIQVLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWG NKILCLAGHTREPAESLSVKEFDPQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGR SLLNDLHILDLETMTWDEFETTGTPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQT MEWSRPKQQGVTPESRAGHAGVTIGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAP PVSEAYALKASLKPSVPSQQINESDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHA FFHYQPGNRADNSKTLGQVVMVEQNEIENRLNQEHLQSLRLKQELTGLENRNAELTEASYISLT KLCKTAENELHLVQDQLSIEQTRASKFEAAKESVAMGSAILNSIAPEEPKVVVPEYGETADIQD KEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGAVVIQQKMYVFGGNHNGRYLGDIQVLDFKT LSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWGNKILCLAGHTREPAESLSVKEFDPQTCTW STLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGRSLLNDLHILDLETMTWDEFETTGTPPSPR SEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQTMEWSRPKQQGVTPESRAGHAGVTIGEYWF ITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAPPVSEAYALKASLKPSVPSQQINESDTNGF SPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHAFFHYQPGNRADNSKTLGQVVMVEQNEIEN RLNQEHLQSLRLKQELTGLENRNAELTEASYISLTKLCKTAENELHLVQDQLSIEQTRASKFEA AKESVAMGSAILNSIAPEEPKVVVPEYGETADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKP RYKHGAVVIQQKMYVFGGNHNGRYLGDIQVLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGH SVIQWGNKILCLAGHTREPAESLSVKEFDPQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFG GEGHGRSLLNDLHILDLETMTWDEFETTGTPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLH LLDTQTMEWSRPKQQGVTPESRAGHAGVTIGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTN LEARAPPVSEAYALKASLKPSVPSQQINESDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLV CSLKHAFFHYQPGNRADNSKTLGQVVMVEQNEIENRLNQEHLQSLRLKQELTGLENRNAELTEA SYISLTKLCKTAENELHLVQDQLSIEQTRASKFEAAKESVAMGSAILNSIAPEEPKVVVPEYGE TADIQDKEVSMEQLCSISTYDQWTPLSVSGQLPKPRYKHGAVVIQQKMYVFGGNHNGRYLGDIQ VLDFKTLSWSKLEAKSQAEPSESAGAVPFSACAGHSVIQWGNKILCLAGHTREPAESLSVKEFD PQTCTWSTLRTYGRSPSSRGGQSVTLVGDTLVVFGGEGHGRSLLNDLHILDLETMTWDEFETTG TPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQTMEWSRPKQQGVTPESRAGHAGVT IGEYWFITGGGNSRKGVSDTLVLNLSTYEWSVLTNLEARAPPVSEAYALKASLKPSVPSQQINE SDTNGFSPLSVAENSSRKVIFEIEELKDEKIVSLVCSLKHAFFHYQPGNRADNSKTLGQVVMVE QNEIENRLNQEHLQSLRLKQELTGLENRNAELTEASYISLTKLCKTAENELHLVQDQLSIEQTR ASKFE(+) MEQSCSILTSLSWISAVSPYSGTTTLGSSGAMLLRIADPMATDSLAASNLEALVCSIES*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d041692_circ_g.1

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