Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d025470_circ_g.1 |
ID in PlantcircBase | zma_circ_003219 |
Alias | circ1520 |
Organism | Zea mays |
Position | chr10: 119885340-119887302 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d025470 |
Parent gene annotation |
protein_coding |
Parent gene strand | + |
Alternative splicing | Zm00001d025470_circ_g.2 |
Support reads | 10 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d025470_T007:5 Zm00001d025470_T010:4 Zm00001d025470_T001:3 Zm00001d025470_T003:3 Zm00001d025470_T009:3 Zm00001d025470_T004:3 Zm00001d025470_T006:5 Zm00001d025470_T008:5 Zm00001d025470_T005:5 Zm00001d025470_T002:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.026702433 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |