Plant Circular RNA Database

Detail information of AT3G19740_circ_g.13

			
						 General Information
					
						CircRNA Name
						AT3G19740_circ_g.13
					
						ID in PlantcircBase
						ath_circ_022769
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr3: 6859450-6862957  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						KNIFE
					
						Parent gene
						
							AT3G19740						
					
						Parent gene annotation
						
							P-loop containing nucleoside triphosphate hydrolases superfamily
 protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT3G19740_circ_g.1 AT3G19740_circ_g.2 AT3G19740_circ_g.3 AT3G19740_circ_g.4 AT3G19740_circ_g.5 AT3G19740_circ_g.6 AT3G19740_circ_g.7 AT3G19740_circ_g.8 AT3G19740_circ_g.9 AT3G19740_circ_g.10 AT3G19740_circ_g.11 AT3G19740_circ_g.12 AT3G19740_circ_g.14 AT3G19740_circ_g.15 AT3G19740_circ_g.16 AT3G19740_circ_g.17 AT3G19740_circ_g.18 AT3G19740_circ_g.19 						
					
						Support reads
						1
					
						Tissues
						inflorescences
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT3G19740.1:10

General Information
CircRNA Name	AT3G19740_circ_g.13
ID in PlantcircBase	ath_circ_022769
Alias	NA
Organism	Arabidpsis thaliana
Position	chr3: 6859450-6862957 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	KNIFE
Parent gene	AT3G19740
Parent gene annotation	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Parent gene strand	-
Alternative splicing	AT3G19740_circ_g.1 AT3G19740_circ_g.2 AT3G19740_circ_g.3 AT3G19740_circ_g.4 AT3G19740_circ_g.5 AT3G19740_circ_g.6 AT3G19740_circ_g.7 AT3G19740_circ_g.8 AT3G19740_circ_g.9 AT3G19740_circ_g.10 AT3G19740_circ_g.11 AT3G19740_circ_g.12 AT3G19740_circ_g.14 AT3G19740_circ_g.15 AT3G19740_circ_g.16 AT3G19740_circ_g.17 AT3G19740_circ_g.18 AT3G19740_circ_g.19
Support reads	1
Tissues	inflorescences
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT3G19740.1:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCCTAACTAAGTACTTGGCTTGCTGCAATACCAAACCCCATCTCTGGTTCCTCTTTAATGCCCT
TGTATACATCACAAAGTCCCTTCTCTTCCAATATAAcagtttcgcaagacggccaaagtttggg
agtatcatcgtctgttcacaaacaaaaaaggtcaaaaaatgaaagcaaacaaaaagaagagcca
atgaacaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CAGTTTCGCAAGACGGCCAAAGTTTGGGAGTATCATCGTCTGTTCACAAACAAAAAAGGTCAAA
AAATGAAAGCAAACAAAAAGAAGAGCCAATGAACAATGACACGTGAGAAAGGCTTACAAATTTC
TCTCTCTCTTTTGAGCCTGTTTCAATCTTGTTTCGTCCACAGATCATTACAACAGGACTTGACA
ATTTATCAAACATTTCCTGAACTTTGTCTACAAACTCATTTTGTTTTGACTTAGGTACAGCTCG
AGACAACCACTGGGACGAGTCGGGAAAATAGACAATAAGTGGTTGTGTGGAGTGTAAAACCTAC
AAGAACAAAAAAAAGAAAGAATAAATTAACGCCATTTCATGTTGTATGTTCCTTGGAGAAAGTG
TAAGCTAACCGCATTCAAAGTCAAGCTACTCTAGACTTCAAATCTTAGGGAAATGATATCATAA
ATTTCCAGCCCAAGAACGCAGCATACGCTGAACAATCCATATATGTTAAGTTTCAAATCAAACT
AAATATCATGAGCACTTACTACTGCTGGATAAATGATCAGATCTGAACTTATATATAAGGCCAA
TGTACAACGTTAGCTGAATGGAAACACGAAAACATAATGTAACTTCCACACATACCTCACTTAA
AGCCTCCAAGGCGATATAGCCATCTTCTGCCTGCATATCCAAATCATGCTTTAGGTCTCCAACT
GCGCAGACAATATGTAAGTTAGCTGCATTTACATAAGATGTCAATCGTCTACAAACAGGGTATT
TCTCCAAATATAGAGCAATCACACATCAACCATACAGAACGCCATGAATTAAATATACCATCTA
TCCAGTGCATATGTAGCTTATGAGAGTGTTCTGTTGATTTCTTGTCACCTCCCTCTGATGATGT
ATCACCTCCAATGTCAAATATGACTGCAACACGATTCCCATTCACCTCATAGACCTCTCCACGT
TGTCCACTAGATAATGGCCTGTAGGTATAGAAATTTTGGTTAAAGACAAACCCTAGGGCATTTA
CAATCCTTCATCCATAATATTTAGCATGCCATGGAAGTTTATAACTTCCAGAGCAATGAGTTCA
AAATGTGTTCCTAAAAGATCAAATGTTACATTTGCAGGCATGTCAAATTGCTGAGAAAACCATG
GATAGTGATGATAATGGTAAGCACGCAAAAACAAGTCATTTAGTTAAGCAAAGGTAATGCGAGT
TGCACTGTTCACAAATAAATGAATAAGTCCTATAGATAACAATTGTGGCAGCAGTTTCATACAC
ATCCAATCCTATACCAGAACTACTCAAATTACTACTAATATGAATAGGCAGAGCAAGCAGAGAT
CAAGTCAAATAATATGAGACAGAGTCATAAAAGATATTAGAGCGTAATATTCTTCAGCAAGGTT
AGAGAATAATTATCACACAAGTGAATCAGTAAACTACCTGTGCTTTGCATCAGCCTTCTTAGAA
GGTCCAACATATTTTACACGATCTCCTGCAAAAAGCGTAAACACAAATAGAAATGAGGAAAAGT
GAAAAAATTGACCACACAAAGAGAACTTAGCAGTCTGACAAGTAGAAGAGGAAAGAGTGAAAGG
CTAAGATAGAAAGACAATACCAGGAAAATTATGACTAGATAGAATACAAAATTACTAAATCAAA
CTTATTTAGCAAACTGATACATTCAAGTGTACCTAGCACTTGTAATGATGAAGATGCCTTCCAG
AGCCTTGATATTGATGATTACCTTTCTTTGCCGGTCGCCTGGCTTTATCAGAATGCTCAACAGC
TGCTGCTTCGCAAGCTTCACCATGTAGTTCTTCTGCTACTAGCTGCCACAATTTAGAGGAGGTA
AGCAAATTTCAGCAATTTCTGAAACTCAATTTAATTGGAAGTTCAAAAAAGGAACAATGCAAAG
AGTCGCATGTAGAACCAAGAAACAGCATTCAAACGGCAGGAATGGTGAAACCTTCTAATTCATG
CATAGTAACTCTAATAACAAGTTCATACAAATAAGATAAATCAAGAATCAGAAAACTTATATGA
CAGGGTCCCAAGATCACATTGTCCACGGGGTATCGCAAAAAGAAAAAGAAATACCATGGTATTA
CCAACTAAATTAGGAAAAGAACAATCAGTACAGACTAAAATTTCTGAATCTCAATTAATGCAAT
CATACCTTTTCGAACTCTTCAAGTTTTGGCACAATTTTCTTGATAGCTTCCTCAGAAACCTCGA
GACAAGCTTCCTCACTGTCACTCCCATCTGCTTTCGCTTCAGAATCCTCTTCGCTCTGAGCACT
AGAATCTTCCTCAGCATCAGACTCTGTCGTGGATTCATCTGCTTCCGCTTCTGCGTTCTCACCA
TCAGATTCAGATTCTTCATTGTAGTCATCAGCAAAATCCTGATCCAGAATTAAAAAATATTACA
TAAACACCAAAAAGAACGAAAGAAAAATGGTGGCATGTTATAGGCAAATTACTCATAAGAATCT
CACATATGGGGCAAGAACGCTGCTGTCAAGAACCAACAGGGGAACTTGTACATCTCGAGCAAGT
GCTCGTACCAACCTCTCCCGGTAAAGCTCAGTACCTGAATAAAATTCAAATTTCTTATTGGTCA
TCTAACATTTCCTCAATATTTTTACTTGATAACAGAAGAGCAACATCAAATCCTGGTCTGCCAT
TTTTATTCTATAGTCAATAACAAACCTGGAACACTCTGGAGCAATATTCTTCCACTTGAAGAAT
CTAAACGGGCACCATATATGGAAGCGGCATTCTTTTGTCTTATATGTGAGGTAACACATTCCAC
CAAAATATCTTTCGTGTGGTCGCTGTGAAAAGATAATGAGCAGAATCCATAAGCAGAAATGGAG
AAAGAAACACAACAAGCGAGAAAAAAAAACATGTTGTAGATTATTACTGGATGTAGTAAGGGAA
GGTCTCCCAAGAAAGCTGTATTTTTTCCCAAGGTTGGATTCTCCGTAAGAACTCGTTTTTGAAT
CTTTCTCGTCTATTAACGAAAGGTGACTCCTTCTTTTTGCATTCACTAGCAAGCTTCTCATTAT
TGAGCCATTCTATTTGGTCTTGTTCTCCAAGTTGAGCATGAGAATCCAAATGCCCAACACCGTT
ATTACTTTTCTCCTTCCCGGTTTTTCCATCATCTACACCATTCTCTTTGTTCAAAGAGATATGT
TTATCCTCACTAGCATTCCTTCCATCACCCTCAGAACTAAAACTACGCAACTGGCTATTCTTCA
AAATACTTAAATGATTTCCCGAGGCAATAGTACCACCGCGGGGAGAAAATGAACCAAGTAGAGA
CTTTCTTGTCAAATTTTCACTATTGGTTAATTTATTTGTGAATCCACAATATCTGGAAACCGTA
TAGTCACGAACGACTGGCCTAACTAAGTACTTGGCTTGCTGCAATACCAAACCCCATCTCTGGT
TCCTCTTTAATGCCCTTGTATACATCACAAAGTCCCTTCTCTTCCAATATAA
						
					

			
		

Sequences
Splice junction sequence	GCCTAACTAAGTACTTGGCTTGCTGCAATACCAAACCCCATCTCTGGTTCCTCTTTAATGCCCT TGTATACATCACAAAGTCCCTTCTCTTCCAATATAAcagtttcgcaagacggccaaagtttggg agtatcatcgtctgttcacaaacaaaaaaggtcaaaaaatgaaagcaaacaaaaagaagagcca atgaacaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CAGTTTCGCAAGACGGCCAAAGTTTGGGAGTATCATCGTCTGTTCACAAACAAAAAAGGTCAAA AAATGAAAGCAAACAAAAAGAAGAGCCAATGAACAATGACACGTGAGAAAGGCTTACAAATTTC TCTCTCTCTTTTGAGCCTGTTTCAATCTTGTTTCGTCCACAGATCATTACAACAGGACTTGACA ATTTATCAAACATTTCCTGAACTTTGTCTACAAACTCATTTTGTTTTGACTTAGGTACAGCTCG AGACAACCACTGGGACGAGTCGGGAAAATAGACAATAAGTGGTTGTGTGGAGTGTAAAACCTAC AAGAACAAAAAAAAGAAAGAATAAATTAACGCCATTTCATGTTGTATGTTCCTTGGAGAAAGTG TAAGCTAACCGCATTCAAAGTCAAGCTACTCTAGACTTCAAATCTTAGGGAAATGATATCATAA ATTTCCAGCCCAAGAACGCAGCATACGCTGAACAATCCATATATGTTAAGTTTCAAATCAAACT AAATATCATGAGCACTTACTACTGCTGGATAAATGATCAGATCTGAACTTATATATAAGGCCAA TGTACAACGTTAGCTGAATGGAAACACGAAAACATAATGTAACTTCCACACATACCTCACTTAA AGCCTCCAAGGCGATATAGCCATCTTCTGCCTGCATATCCAAATCATGCTTTAGGTCTCCAACT GCGCAGACAATATGTAAGTTAGCTGCATTTACATAAGATGTCAATCGTCTACAAACAGGGTATT TCTCCAAATATAGAGCAATCACACATCAACCATACAGAACGCCATGAATTAAATATACCATCTA TCCAGTGCATATGTAGCTTATGAGAGTGTTCTGTTGATTTCTTGTCACCTCCCTCTGATGATGT ATCACCTCCAATGTCAAATATGACTGCAACACGATTCCCATTCACCTCATAGACCTCTCCACGT TGTCCACTAGATAATGGCCTGTAGGTATAGAAATTTTGGTTAAAGACAAACCCTAGGGCATTTA CAATCCTTCATCCATAATATTTAGCATGCCATGGAAGTTTATAACTTCCAGAGCAATGAGTTCA AAATGTGTTCCTAAAAGATCAAATGTTACATTTGCAGGCATGTCAAATTGCTGAGAAAACCATG GATAGTGATGATAATGGTAAGCACGCAAAAACAAGTCATTTAGTTAAGCAAAGGTAATGCGAGT TGCACTGTTCACAAATAAATGAATAAGTCCTATAGATAACAATTGTGGCAGCAGTTTCATACAC ATCCAATCCTATACCAGAACTACTCAAATTACTACTAATATGAATAGGCAGAGCAAGCAGAGAT CAAGTCAAATAATATGAGACAGAGTCATAAAAGATATTAGAGCGTAATATTCTTCAGCAAGGTT AGAGAATAATTATCACACAAGTGAATCAGTAAACTACCTGTGCTTTGCATCAGCCTTCTTAGAA GGTCCAACATATTTTACACGATCTCCTGCAAAAAGCGTAAACACAAATAGAAATGAGGAAAAGT GAAAAAATTGACCACACAAAGAGAACTTAGCAGTCTGACAAGTAGAAGAGGAAAGAGTGAAAGG CTAAGATAGAAAGACAATACCAGGAAAATTATGACTAGATAGAATACAAAATTACTAAATCAAA CTTATTTAGCAAACTGATACATTCAAGTGTACCTAGCACTTGTAATGATGAAGATGCCTTCCAG AGCCTTGATATTGATGATTACCTTTCTTTGCCGGTCGCCTGGCTTTATCAGAATGCTCAACAGC TGCTGCTTCGCAAGCTTCACCATGTAGTTCTTCTGCTACTAGCTGCCACAATTTAGAGGAGGTA AGCAAATTTCAGCAATTTCTGAAACTCAATTTAATTGGAAGTTCAAAAAAGGAACAATGCAAAG AGTCGCATGTAGAACCAAGAAACAGCATTCAAACGGCAGGAATGGTGAAACCTTCTAATTCATG CATAGTAACTCTAATAACAAGTTCATACAAATAAGATAAATCAAGAATCAGAAAACTTATATGA CAGGGTCCCAAGATCACATTGTCCACGGGGTATCGCAAAAAGAAAAAGAAATACCATGGTATTA CCAACTAAATTAGGAAAAGAACAATCAGTACAGACTAAAATTTCTGAATCTCAATTAATGCAAT CATACCTTTTCGAACTCTTCAAGTTTTGGCACAATTTTCTTGATAGCTTCCTCAGAAACCTCGA GACAAGCTTCCTCACTGTCACTCCCATCTGCTTTCGCTTCAGAATCCTCTTCGCTCTGAGCACT AGAATCTTCCTCAGCATCAGACTCTGTCGTGGATTCATCTGCTTCCGCTTCTGCGTTCTCACCA TCAGATTCAGATTCTTCATTGTAGTCATCAGCAAAATCCTGATCCAGAATTAAAAAATATTACA TAAACACCAAAAAGAACGAAAGAAAAATGGTGGCATGTTATAGGCAAATTACTCATAAGAATCT CACATATGGGGCAAGAACGCTGCTGTCAAGAACCAACAGGGGAACTTGTACATCTCGAGCAAGT GCTCGTACCAACCTCTCCCGGTAAAGCTCAGTACCTGAATAAAATTCAAATTTCTTATTGGTCA TCTAACATTTCCTCAATATTTTTACTTGATAACAGAAGAGCAACATCAAATCCTGGTCTGCCAT TTTTATTCTATAGTCAATAACAAACCTGGAACACTCTGGAGCAATATTCTTCCACTTGAAGAAT CTAAACGGGCACCATATATGGAAGCGGCATTCTTTTGTCTTATATGTGAGGTAACACATTCCAC CAAAATATCTTTCGTGTGGTCGCTGTGAAAAGATAATGAGCAGAATCCATAAGCAGAAATGGAG AAAGAAACACAACAAGCGAGAAAAAAAAACATGTTGTAGATTATTACTGGATGTAGTAAGGGAA GGTCTCCCAAGAAAGCTGTATTTTTTCCCAAGGTTGGATTCTCCGTAAGAACTCGTTTTTGAAT CTTTCTCGTCTATTAACGAAAGGTGACTCCTTCTTTTTGCATTCACTAGCAAGCTTCTCATTAT TGAGCCATTCTATTTGGTCTTGTTCTCCAAGTTGAGCATGAGAATCCAAATGCCCAACACCGTT ATTACTTTTCTCCTTCCCGGTTTTTCCATCATCTACACCATTCTCTTTGTTCAAAGAGATATGT TTATCCTCACTAGCATTCCTTCCATCACCCTCAGAACTAAAACTACGCAACTGGCTATTCTTCA AAATACTTAAATGATTTCCCGAGGCAATAGTACCACCGCGGGGAGAAAATGAACCAAGTAGAGA CTTTCTTGTCAAATTTTCACTATTGGTTAATTTATTTGTGAATCCACAATATCTGGAAACCGTA TAGTCACGAACGACTGGCCTAACTAAGTACTTGGCTTGCTGCAATACCAAACCCCATCTCTGGT TCCTCTTTAATGCCCTTGTATACATCACAAAGTCCCTTCTCTTCCAATATAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.118616251

Conservation Information
Conserved circRNAs	NA
PMCS	0.118616251

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							6862931-6859452(-)
						
					

						Potential amino acid sequence
						
							MYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTNSENLTRKSLLGSFSPRGGTI
ASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGKTGKEKSNNGVGHLDSHAQLG
EQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEKIQLSWETFPYYIHDHTKDIL
VECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGTELYRERLVRALARDVQVPLLVLDSSVLA
PYDFADDYNEESESDGENAEAEADESTTESDAEEDSSAQSEEDSEAKADGSDSEEACLEVSEEA
IKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDRVKYVGPSKKADAKHRPLSSG
QRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWIDVGDLKHDLDMQAEDGYIAL
EALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMFDKLSSPVVMICGRNKIETGS
KEREKFTMILPNFGRLAKLLYWKRRDFVMYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYC
GFTNKLTNSENLTRKSLLGSFSPRGGTIASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNK
ENGVDDGKTGKEKSNNGVGHLDSHAQLGEQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFL
RRIQPWEKIQLSWETFPYYIHDHTKDILVECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGT
ELYRERLVRALARDVQVPLLVLDSSVLAPYDFADDYNEESESDGENAEAEADESTTESDAEEDS
SAQSEEDSEAKADGSDSEEACLEVSEEAIKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKAR
RPAKKGDRVKYVGPSKKADAKHRPLSSGQRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHS
HKLHMHWIDVGDLKHDLDMQAEDGYIALEALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEF
VDKVQEMFDKLSSPVVMICGRNKIETGSKEREKFTMILPNFGRLAKLLYWKRRDFVMYTRALKR
NQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTNSENLTRKSLLGSFSPRGGTIASGNHLSI
LKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGKTGKEKSNNGVGHLDSHAQLGEQDQIEWL
NNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEKIQLSWETFPYYIHDHTKDILVECVTSHI
RQKNAASIYGARLDSSSGRILLQSVPGTELYRERLVRALARDVQVPLLVLDSSVLAPYDFADDY
NEESESDGENAEAEADESTTESDAEEDSSAQSEEDSEAKADGSDSEEACLEVSEEAIKKIVPKL
EEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDRVKYVGPSKKADAKHRPLSSGQRGEVYEV
NGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWIDVGDLKHDLDMQAEDGYIALEALSEVLH
STQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMFDKLSSPVVMICGRNKIETGSKEREKFTM
ILPNFGRLAKLLYWKRRDFVMYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTN
SENLTRKSLLGSFSPRGGTIASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGK
TGKEKSNNGVGHLDSHAQLGEQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEK
IQLSWETFPYYIHDHTKDILVECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGTELYRERLV
RALARDVQVPLLVLDSSVLAPYDFADDYNEESESDGENAEAEADESTTESDAEEDSSAQSEEDS
EAKADGSDSEEACLEVSEEAIKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDR
VKYVGPSKKADAKHRPLSSGQRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWI
DVGDLKHDLDMQAEDGYIALEALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMF
DKLSSPVVMICGRNKIETGSKEREKFTMILPNFGRLAKL(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	6862931-6859452(-)
Potential amino acid sequence	MYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTNSENLTRKSLLGSFSPRGGTI ASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGKTGKEKSNNGVGHLDSHAQLG EQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEKIQLSWETFPYYIHDHTKDIL VECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGTELYRERLVRALARDVQVPLLVLDSSVLA PYDFADDYNEESESDGENAEAEADESTTESDAEEDSSAQSEEDSEAKADGSDSEEACLEVSEEA IKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDRVKYVGPSKKADAKHRPLSSG QRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWIDVGDLKHDLDMQAEDGYIAL EALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMFDKLSSPVVMICGRNKIETGS KEREKFTMILPNFGRLAKLLYWKRRDFVMYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYC GFTNKLTNSENLTRKSLLGSFSPRGGTIASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNK ENGVDDGKTGKEKSNNGVGHLDSHAQLGEQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFL RRIQPWEKIQLSWETFPYYIHDHTKDILVECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGT ELYRERLVRALARDVQVPLLVLDSSVLAPYDFADDYNEESESDGENAEAEADESTTESDAEEDS SAQSEEDSEAKADGSDSEEACLEVSEEAIKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKAR RPAKKGDRVKYVGPSKKADAKHRPLSSGQRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHS HKLHMHWIDVGDLKHDLDMQAEDGYIALEALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEF VDKVQEMFDKLSSPVVMICGRNKIETGSKEREKFTMILPNFGRLAKLLYWKRRDFVMYTRALKR NQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTNSENLTRKSLLGSFSPRGGTIASGNHLSI LKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGKTGKEKSNNGVGHLDSHAQLGEQDQIEWL NNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEKIQLSWETFPYYIHDHTKDILVECVTSHI RQKNAASIYGARLDSSSGRILLQSVPGTELYRERLVRALARDVQVPLLVLDSSVLAPYDFADDY NEESESDGENAEAEADESTTESDAEEDSSAQSEEDSEAKADGSDSEEACLEVSEEAIKKIVPKL EEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDRVKYVGPSKKADAKHRPLSSGQRGEVYEV NGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWIDVGDLKHDLDMQAEDGYIALEALSEVLH STQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMFDKLSSPVVMICGRNKIETGSKEREKFTM ILPNFGRLAKLLYWKRRDFVMYTRALKRNQRWGLVLQQAKYLVRPVVRDYTVSRYCGFTNKLTN SENLTRKSLLGSFSPRGGTIASGNHLSILKNSQLRSFSSEGDGRNASEDKHISLNKENGVDDGK TGKEKSNNGVGHLDSHAQLGEQDQIEWLNNEKLASECKKKESPFVNRRERFKNEFLRRIQPWEK IQLSWETFPYYIHDHTKDILVECVTSHIRQKNAASIYGARLDSSSGRILLQSVPGTELYRERLV RALARDVQVPLLVLDSSVLAPYDFADDYNEESESDGENAEAEADESTTESDAEEDSSAQSEEDS EAKADGSDSEEACLEVSEEAIKKIVPKLEEFEKLVAEELHGEACEAAAVEHSDKARRPAKKGDR VKYVGPSKKADAKHRPLSSGQRGEVYEVNGNRVAVIFDIGGDTSSEGGDKKSTEHSHKLHMHWI DVGDLKHDLDMQAEDGYIALEALSEVLHSTQPLIVYFPDSSQWLSRAVPKSKQNEFVDKVQEMF DKLSSPVVMICGRNKIETGSKEREKFTMILPNFGRLAKL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT3G19740_circ_g.13

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