Detail information of AAAA02036392.1_circ_ig.5


General Information
CircRNA Name AAAA02036392.1_circ_ig.5
ID in PlantcircBase osi_circ_008291
Alias AAAA02036392.1:6345|9385
Organism Oryza sativa ssp. indica
Position chrAAAA02036392.1: 6345-9385  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ig-circRNA
Identification method find_circ
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing AAAA02036392.1_circ_ig.1 AAAA02036392.1_circ_ig.2 AAAA02036392.1_circ_ig.3 AAAA02036392.1_circ_ig.4 AAAA02036392.1_circ_ig.6 AAAA02036392.1_circ_ig.7
Support reads NA
Tissues leaf
Exon boundary   NA-NA
Splicing signals   GT-AG
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GGAGGTTGTCAGCAGACTAGATGATATGTTCCAGAACAGGTCATCACCGCCGTTGTTTTCAACT
TCTTCAACGATCGATCCAGCGTCACGCCGATCTCAGtaccagcgccagcggtaacatcattcaa
atcgaattacaccagagaagtgtgatgctcggggatgttacaatccattttttagaaaatatta
cagatcat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TACCAGCGCCAGCGGTAACATCATTCAAATCGAATTACACCAGAGAAGTGTGATGCTCGGGGAT
GTTACAATCCATTTTTTAGAAAATATTACAGATCATTTTTCAGAGGAGTGCATAGTTGGTATTG
GTCGATATGGAAATGTTTACAAGGTATATATGACAAATGTTTGTACTTTTCTTTAATTTTGAGA
TGGTGTGTACTACTGACAATAGAGCATTCACTGTTTGTATTAATCACCAACTAACAGAGAATTT
TTGCAGGGAGTACTAGAAAATGGGGAAGAGATTGCTGTGAAGAAGCTCAATCGCAAGCTGTCAC
TTGATGCTGTGCAGTTTAAGAATGAATTAGTTAACCTTATGAATGTCCAACACCAAAATACTGT
ACAGTTAATTGGTTACTGCTATGAAACAAGAGACCAAGTGGAGGAAAGAGCTGTCTGTTTCGAA
TATTTGCCGCGTGGAAGCCTTGACAAGTATCTTTCTGGTATGATTGTTTTCATGTATACTTTAT
AGTAAACAAGAAAAATAATAATCCAATTTGGGATCTCCAGAAATTAATTATTGTTCACATGCAC
AGATGAATCCGCTGGGCTTGATTGGTGCACCCGTTACAAAATAATAAAGGGTATTTGCGACGGT
GTAAACTACCTTCATAATGGACGGCAAGAGGGTATTTACCATCTTGATTTAAAACCTGGCAATA
TATTGCTGGACAAGAACTACATACCAAAAATTGCAGATTTTGGTTTGTCGAGACTCTTGGGAAT
ACCATCATTCGATCATATAACAGAAAAGCATATAGGAACAGAGTAAGTTGATAACTCATTGCGA
ATTAAGGCCATGCATATTTTGGAGGAAACTATGGATCGGTCGCCCGATTCCTAAAAAAATTCGG
GTGGTCAAATATTACAGTTAACCAACAAGTAAAACATTAAGTTATATATGGTGAAACAAAAAAT
CAGCAATTAAAACATTTAAAATTTTTGTAAACACGGAGAAGACACACGTTGAAACATGTCGCTG
TCAGGTATGAAATAGCGTGCTAACGGATTGAAACAGGATATATTTTTCTTTCATCAAAATATAA
TCGTGTGATACCTTGTTGTAAATATTTAATTACAATGAATACAACGGTATGATCGGATCGTAAA
TTGGTTAAGTAGTTTAGGAGAAAAAGTATTTCGAAGATCGCTAAAATGCATACATGGATACAGT
GGAGAGAGAGTAATGACAGGTAGTTCAGTGAATTTTTTGAAACACACTAAAGACACACATTGAA
ATATATCATTATCACGTATAAAATATTGAGTTTTTACTGTTTGAAACACATAGTTTTATTTTAA
CAGAATATAATTATATGATATCTTGTTGTAAAGATTTAATTACAACAAATACAATGATGTGATC
AGATCGTAGAATGGATAAGTAGTTTAAGAGAAAAAATATTTAAAGAGAGAAGAAAGGAGAAGAA
AAAATTAGCTAGCATCTTGCATGCATGCAGGAGTGTAGGGTCCGATTTTTATTCATCTAATCAG
GGGGCGCTCAAGTTTTAGCAATCTCCATATTTTGATGATTATTTTTTGACAATGGGCCGGTGAT
GGAATGTTGCCCAATATTTTATTTGAGAATTCTTTATTAATTGAAGAATAAAAGATTTGTTTTC
TTTATTAGTTGACAAAACATTTCCTACTCATAATCAATAAATATTACAAAAGGAAAGCACTGAT
GCTAGTTATTCTTTCTAATGCAACCATACATGAAAGAAATTAAATCAGGGGTACAAATAGAACC
CCAACATTCTTTGGAATTGGGAAATATGGACTAGTAATAAAATGTATTTGAAATAAAGGTAATA
TATGCACCAAAACAAATAATGGCTGTTTAAAATCCTGAATTTTGGATACATGATATGAATTAAA
TTATGCACATTTTTTGAAATCTTTGGAAATTTCATATGAAGTTGAGTGCTTCTCATTCAGGATG
TAGATGTTTTCGAAATTTTAAATTAACTAGCTTCGTACATTATAATTCAAATTTAAATATTAAA
AGAAGGATTATGGTATTAGTTAAATTAACTTATAGGCAATAATATTTTTTCTAGCAGTTTTTAT
TTTTAGATAATGGATTAAAATCCAGCCTACATTCACAATGACGTATGCTGCCCAACGTTATACA
AGAGTAATTAGACCCGAATTCCTTACAATAAGAGTAAAAAAGTACCAAAGTGACAACACTTAAA
AGAGAAAAGATAAACACATGACTACTCTTCCAATCTCCTTCTAAAGTTCCACCCATATTTTATA
TACAACTCCATGACCCTCCAACATCTTGCAACTTTCTTCCCATTTGTGGTCATCTTCTTCTTTA
TCGTGCCCAATAAGTCTCACTGAATACCACTTCTAGAAAGAATTAGTTTTTTTTTCTAGCAGGT
TGAATTCTACTATGTTACATTTCTTTTTTATGATCTACTATGCTTATATTGAATTAAAAGTAAC
TGACAGAAAATACTAAATATCGATGATTTCATCATGCAGCGGGTACACGCCACCGGAATACGTT
GAGACAGGCCGAATCTCAGAGAAGTTTGATGTATTTAGTTTGGGTCTGATGATCATAGAAATAA
TGACAGGACATAAGAAACAGTCCAAAAGGGGTGAGATGTCTTCGAAACAGTTCATCGATGTCGT
AAGTGATCAGAAGCAATTTTCTGTGTGGTTATATGATGTCGGTCCTTTAGCTATGTGCGGCTTC
TATAATATCCTTCTAACTTTATTATGTTTCAATTTCTCAGATACATGAAAACTGGAAAAAAAGA
TGGCAGCAGGCAACGCCGATGTATACAACAGAAGAGCTAGATCGTCTTCAACTTCAAGTGAAAA
TATGTATAGAAATGGCGTTACAGTGTGTGGAGCCTGAGCAACTGAAAAGGCCTACCATGCTGGA
GGTTGTCAGCAGACTAGATGATATGTTCCAGAACAGGTCATCACCGCCGTTGTTTTCAACTTCT
TCAACGATCGATCCAGCGTCACGCCGATCTCAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021