Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d048286_circ_g.1 |
ID in PlantcircBase | zma_circ_003051 |
Alias | circ73 |
Organism | Zea mays |
Position | chr9: 153894035-153895979 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | KNIFE |
Parent gene | Zm00001d048286 |
Parent gene annotation |
Acyl-CoA N-acyltransferases (NAT) superfamily protein |
Parent gene strand | - |
Alternative splicing | Zm00001d048286_circ_igg.1 Zm00001d048286_circ_igg.2 Zm00001d048286_circ_igg.3 Zm00001d048286_circ_igg.4 Zm00001d048286_circ_g.5 |
Support reads | NA |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d048286_T004:2 Zm00001d048286_T006:7 Zm00001d048286_T002:7 Zm00001d048286_T001:2 Zm00001d048286_T003:6 Zm00001d048286_T005:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.089151688 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |