Plant Circular RNA Database

Detail information of Csa2G258850_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa2G258850_circ_g.1
					
						ID in PlantcircBase
						csa_circ_001041
					
						Alias
						Chr2:12613699_12618158
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr2: 12613699-12618158  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa2G258850						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							Csa2G258850_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa2G258850.1:11

General Information
CircRNA Name	Csa2G258850_circ_g.1
ID in PlantcircBase	csa_circ_001041
Alias	Chr2:12613699_12618158
Organism	Cucumis sativus
Position	chrChr2: 12613699-12618158 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa2G258850
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	Csa2G258850_circ_g.2
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa2G258850.1:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATAAGAAATAGATGATAAAAATGGTCACATTTTACCTTATTCATATCCAATATCCCTTCTTTT
TCCATATCTTGAAGTATTCTGATGCAGTCGTGCAGCcacttactatcgacttgaggcagtgtag
agtccagtgacatgagtggtctatcaagggaggatggatctgcaattcttcgtaagcacatgcc
tttgaaaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CACTTACTATCGACTTGAGGCAGTGTAGAGTCCAGTGACATGAGTGGTCTATCAAGGGAGGATG
GATCTGCAATTCTTCGTAAGCACATGCCTTTGAAAAGATCAGACTACAGATTAGTCAAAAGTAT
AAAAAGGCTAACCAATTAACTCAGGATAATAGTAATCTATCAAGAGGAAAAGGAACGTTTCTAT
TAAGTACAGACATGCCTTTGAAAATATCAGACTAAAGATAAGTTAAAAACGCAAAGAAATAACC
AATTCAAAGTAAATTTTTGGAAGATATAAGCCAGAAAATATTCTTGAAACCAAGAAATGTAGAG
CGCCAGAATCAGAGACAAAAGAAGTTAAAATTCATGATAAGTTGAAAGATGTGTGTTCTTTCAA
TTCCTTTTTTTTTTTCTTTTTTCAAACCAGAAAAATCCATCTGAAAGAAAAATACATTGTTATT
TGTAAACAGTGGGTCAGCAGACAATATATAACAACTAGGAAATTGTAAAACAAAAAAGACGTGT
AGTTTCTTATGATAAAAAAACATGTGTAGACAATTGAATTCGATAAACTTACCAATTATGCACC
TATACATGGTTAAGGTTGGCACAATCCCATCCTCTTTGGCTTGAGAGAGAAGCATCAGGGCAAT
TTCTAAATCATTATTCCTATAAACAGTTGAGAAAAAGATGCTAGTGAGAATAAGGATTAAATTA
ATGTCGTTGATACAAAACTTGGCCAATTGTATTTACCTGTCACTCGCTGCCGTAAGTATGGAGT
ATGTAATATTGTTTGGGGAGAGTCCTAATTCCTTCATTTCAGTTAGAATATCCATAGCCATTTG
TAGTTGTTCCCCATCAGCTGTAGGTGACATTCTAATGTTATCTTATAGAAGCAACGCACATTAT
TCTAAAAGTATACGGCAAATGTTAGTTGTAATTAGTTAAAGTGGATATTTCTCAATTTGTGAGA
AATGTTGGTGGAATAACTTCAATCAGAATATTGAGCATAGAAGGTAGCAAAAAAGGGACATACA
CAGTGCAGTTATTAGTGCGTTTACAGTTGATACAGTTAGCCTCAATTTCATAGACTTGAGATCC
TCATACAGTGCCAAGGCCTTCTGCCAGTTTTTAGCCTGAAACAATGATCGGAAAGTGTTTTTTT
ATTGTCACAGATAATTTGGTAACAAAAAAAAATTCGTACTCAATTTTTTTTTACTCCATAGTAA
AATGTAAGATCCTCAAGTAAAAATATGTTGGACCAAGACAGCATAGATGCCTCCATAGATAGAA
ATTTTAAATAAACATGAACTTCCATCTCAAAACTAATCGGCAATGAAAAAAGTAACTCCATGTA
TCTTATAAAGATGGTGAGTTTCTCTATTTCTCTAATATGAAATCTCCAACACGCCCCATTGCCT
GCCTCTTTGTGCTCACCATTTTTGGATAGGATCTCAGTTCTCTATTTCTCTAAACCCAGGTCCG
TCATTGCTTGTTTCAGTTTCATGGACTCTTATAACATATTAGATAATCATGGAGTTCTATTTCA
AAGTCAATTGATAACTAGATCAGTAACTCGCGTATTTTATAAAGATTATGAGTATTCTCTATTC
TTCTAATCTAACCTCAAAAAAACAGTTAAAGATGATGAGTCATACTCCGTCAAAATACACTCTG
AACATTTATATGAATCATATCACTAATCAGTATCAGACGTGGAAAAATTTATTATAAGAACCTA
AAAATGAAGTTTTTGAAGTCAAGATAGAGCTCGTAATATATAATACTTCAAAGAAATTTAAAAA
ATAATAGATAAATAATTGAAAGAAATGAAAATAATAGACTATCTAACAACAAAACAAAGAACTA
AGCAATTCCAGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAATGCA
AGCAGAAAATAGAACTCAAGTGAAATGCATAAAGTCAGACCTTTTGAGATGAATCTAAAAGTTT
CCAGCATGCTTGTCAATAATGAACAAAAAATAAAAAGTTCGCATTTTTACGCACATTGCTACAG
GCACCCATCAAAGAACTATATGACACAATGCCAACACGTATCCCTAGTGTCTTGGCTTCTCCTA
AGACTTCAAAGGCAGCATCCAGCTTACCAGCATGGCCTGCAACATCTATTAATGCACTGAGAAA
AATCTGCATGAGATATTAAATATGAGAATTAGCACCCCCATGGATGAAACAAAAGGCAGCTGAA
CAGCACACACAGAAGACTGTCCAAAAACTTGAAAAAAATTCTTTCTTCCAACTAAATTACCCAC
ATGTTATAGTCGAATCAAGTTTTGTAATAATCCGGAACCACTCTTAATAAACATTCAAAAAGAA
AGAAATACCCAAACCCTAACTTATTTTCTCGATTCTGAATCATCCATGAATCATGATCCAAGCA
AGATGTGCATAACTCCATCAATATAACATACCTCATCAGGTTGCACTCCTTTCCTGGTCATATC
TTGATATATATTGGATGCAAAGTCCCAATCACAAGATTGACTGCAACAATTAACAGCAATGGTG
TAAACCTCTGGTGTGCCCTTAATCTTATAATCATGGATCATCTTGTACACTTCTCTTGCTCGAT
CAACCTATAGGAAATGCATGATTTTTCTGCTCTTAAAACCAACACCGACAACCTAACTGGAGAG
AGAGAGAGGAGAATTGAATGGTAGCAAGAAACCTTTAGGGGGTGTTTGGGTAAAGGATGGGGAA
TTGTGAACTTCTAAAGCTAATAGTGTAAATAGTTGATAAGGTATAAAATCGATGTTTTTAGTAG
TGGGACTCACAAGGCACAAACTCTTTGGGTCAATCAAGTAGTGGAGTTCACTACTCCTACTACC
ACAACTCATTGGCCCAAACACCCCCTTAGATTTAATAAAAACATACCTGACCAGCATTTGCACA
TGCCTTCATCAAAGCACCAATTGTAATATGATCCGGCTCTATAGGATGTAACTCAGCCCCCATT
TCTGCAAGCACGTCAAAAGCACGATCCACTGCGCCTGACTGACCACATGCAGTGATAAGTGCAT
TGAATACAACTCTGTCTGGCTTCACGTTCTACTGCACAGAATATCTTATCAGCAAGAATTCTTA
TTTTTGTTAGAATACAAGTTGAATATTCAGCGTTTAGACAGAATATGTAGCATGCCCTTGTTTG
CACGTCCATATATACAAATAAAGTAACAAATAGGCCCAGATAAAATGAGAAAAAAGGAACGTTA
AGATCTGTGGTCATACCTTTGACCTCATTATCCCATACACGCCAAATGCCTTTGCGACTTGAGC
TGCTCTTGCACAACCATCAATAAGTGCCCCATATGTGTGAACGTTAGGTTCCACACCAGCATTA
ACCATTCGGTGGAATACCTAGAAGCAAAAAGCTCAGACAATGCAATGATAACAGGAAACTCATC
TTGAAAAATAAAAACCTTTCATACAAGTTTTCGACAAATTAAAATGGAGGAACAATTTCAAAGC
ATGTTCCGAAGTTTTTAAGAAGGAAAAGTAAAAAATAAATAATACATTCTTGTTAGGTACTAGA
GGAAGTAGTTAAATGTCAGATGGACCAATTAAAAAATGTGTGAGATTCAAATTCACTGCTATCA
TAATTTCAGACTGACAGGAAAGACAACTGATGCTTCAACTTTTGTAGTTAAAAGTACTGGAAAA
CTCGGCATGTTTTCTTTCCAAGTAGAATTAAGTTAAATATAAATGACAGGAGGTAAAATAATTT
TACCAAATTCAATAGTTCAAGATGAGATATCAATAAATCAATAGAAGCTTCATTACATGTAAGA
AAGGTGTATTGAAAGTCCATTAAGAAAACCCCCCAGTGAGATAGTCTAAGCATTAGTGAGACCT
AAGAACAGGTAACCAAAATGAAAGAAACCATACTTCAAACATTGCATCCACTTTTCCACTTTTG
CCACATGTTGAGATTAAAGTAGTGTACAGTTTGCAATCTGCTTTCATTCCAGCCTCCTGGACAA
GCCGCACAACTTGGAAAGCTCCTAAATTTACAATGCATAAATTATGCACCCTAAAAGAATGATG
GTTGTAAATAGTAAAAGACTGAGATTGTTTCCACACTGAAGGAGTTAAAAGATAGTAAATAATA
CATTAACTTACTTTCAGAATCTTGAGAACTTGCACATACAGACATGAGCATATTGAATGTACTC
AATGTGGGGTTTTGAATAAGTGCGGTGTACTGAAAAGCTTCCTGAACAGCCTTTTTACTCTTGC
AAATATTGAAAAACTTCCCATGATAAATCTACAGCCGAAAAACTCGACAAATTAGTTGTAATTC
AGATAAGTCATAAGAAATAGATGATAAAAATGGTCACATTTTACCTTATTCATATCCAATATCC
CTTCTTTTTCCATATCTTGAAGTATTCTGATGCAGTCGTGCAGC
						
					

			
		

Sequences
Splice junction sequence	CATAAGAAATAGATGATAAAAATGGTCACATTTTACCTTATTCATATCCAATATCCCTTCTTTT TCCATATCTTGAAGTATTCTGATGCAGTCGTGCAGCcacttactatcgacttgaggcagtgtag agtccagtgacatgagtggtctatcaagggaggatggatctgcaattcttcgtaagcacatgcc tttgaaaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CACTTACTATCGACTTGAGGCAGTGTAGAGTCCAGTGACATGAGTGGTCTATCAAGGGAGGATG GATCTGCAATTCTTCGTAAGCACATGCCTTTGAAAAGATCAGACTACAGATTAGTCAAAAGTAT AAAAAGGCTAACCAATTAACTCAGGATAATAGTAATCTATCAAGAGGAAAAGGAACGTTTCTAT TAAGTACAGACATGCCTTTGAAAATATCAGACTAAAGATAAGTTAAAAACGCAAAGAAATAACC AATTCAAAGTAAATTTTTGGAAGATATAAGCCAGAAAATATTCTTGAAACCAAGAAATGTAGAG CGCCAGAATCAGAGACAAAAGAAGTTAAAATTCATGATAAGTTGAAAGATGTGTGTTCTTTCAA TTCCTTTTTTTTTTTCTTTTTTCAAACCAGAAAAATCCATCTGAAAGAAAAATACATTGTTATT TGTAAACAGTGGGTCAGCAGACAATATATAACAACTAGGAAATTGTAAAACAAAAAAGACGTGT AGTTTCTTATGATAAAAAAACATGTGTAGACAATTGAATTCGATAAACTTACCAATTATGCACC TATACATGGTTAAGGTTGGCACAATCCCATCCTCTTTGGCTTGAGAGAGAAGCATCAGGGCAAT TTCTAAATCATTATTCCTATAAACAGTTGAGAAAAAGATGCTAGTGAGAATAAGGATTAAATTA ATGTCGTTGATACAAAACTTGGCCAATTGTATTTACCTGTCACTCGCTGCCGTAAGTATGGAGT ATGTAATATTGTTTGGGGAGAGTCCTAATTCCTTCATTTCAGTTAGAATATCCATAGCCATTTG TAGTTGTTCCCCATCAGCTGTAGGTGACATTCTAATGTTATCTTATAGAAGCAACGCACATTAT TCTAAAAGTATACGGCAAATGTTAGTTGTAATTAGTTAAAGTGGATATTTCTCAATTTGTGAGA AATGTTGGTGGAATAACTTCAATCAGAATATTGAGCATAGAAGGTAGCAAAAAAGGGACATACA CAGTGCAGTTATTAGTGCGTTTACAGTTGATACAGTTAGCCTCAATTTCATAGACTTGAGATCC TCATACAGTGCCAAGGCCTTCTGCCAGTTTTTAGCCTGAAACAATGATCGGAAAGTGTTTTTTT ATTGTCACAGATAATTTGGTAACAAAAAAAAATTCGTACTCAATTTTTTTTTACTCCATAGTAA AATGTAAGATCCTCAAGTAAAAATATGTTGGACCAAGACAGCATAGATGCCTCCATAGATAGAA ATTTTAAATAAACATGAACTTCCATCTCAAAACTAATCGGCAATGAAAAAAGTAACTCCATGTA TCTTATAAAGATGGTGAGTTTCTCTATTTCTCTAATATGAAATCTCCAACACGCCCCATTGCCT GCCTCTTTGTGCTCACCATTTTTGGATAGGATCTCAGTTCTCTATTTCTCTAAACCCAGGTCCG TCATTGCTTGTTTCAGTTTCATGGACTCTTATAACATATTAGATAATCATGGAGTTCTATTTCA AAGTCAATTGATAACTAGATCAGTAACTCGCGTATTTTATAAAGATTATGAGTATTCTCTATTC TTCTAATCTAACCTCAAAAAAACAGTTAAAGATGATGAGTCATACTCCGTCAAAATACACTCTG AACATTTATATGAATCATATCACTAATCAGTATCAGACGTGGAAAAATTTATTATAAGAACCTA AAAATGAAGTTTTTGAAGTCAAGATAGAGCTCGTAATATATAATACTTCAAAGAAATTTAAAAA ATAATAGATAAATAATTGAAAGAAATGAAAATAATAGACTATCTAACAACAAAACAAAGAACTA AGCAATTCCAGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAATGCA AGCAGAAAATAGAACTCAAGTGAAATGCATAAAGTCAGACCTTTTGAGATGAATCTAAAAGTTT CCAGCATGCTTGTCAATAATGAACAAAAAATAAAAAGTTCGCATTTTTACGCACATTGCTACAG GCACCCATCAAAGAACTATATGACACAATGCCAACACGTATCCCTAGTGTCTTGGCTTCTCCTA AGACTTCAAAGGCAGCATCCAGCTTACCAGCATGGCCTGCAACATCTATTAATGCACTGAGAAA AATCTGCATGAGATATTAAATATGAGAATTAGCACCCCCATGGATGAAACAAAAGGCAGCTGAA CAGCACACACAGAAGACTGTCCAAAAACTTGAAAAAAATTCTTTCTTCCAACTAAATTACCCAC ATGTTATAGTCGAATCAAGTTTTGTAATAATCCGGAACCACTCTTAATAAACATTCAAAAAGAA AGAAATACCCAAACCCTAACTTATTTTCTCGATTCTGAATCATCCATGAATCATGATCCAAGCA AGATGTGCATAACTCCATCAATATAACATACCTCATCAGGTTGCACTCCTTTCCTGGTCATATC TTGATATATATTGGATGCAAAGTCCCAATCACAAGATTGACTGCAACAATTAACAGCAATGGTG TAAACCTCTGGTGTGCCCTTAATCTTATAATCATGGATCATCTTGTACACTTCTCTTGCTCGAT CAACCTATAGGAAATGCATGATTTTTCTGCTCTTAAAACCAACACCGACAACCTAACTGGAGAG AGAGAGAGGAGAATTGAATGGTAGCAAGAAACCTTTAGGGGGTGTTTGGGTAAAGGATGGGGAA TTGTGAACTTCTAAAGCTAATAGTGTAAATAGTTGATAAGGTATAAAATCGATGTTTTTAGTAG TGGGACTCACAAGGCACAAACTCTTTGGGTCAATCAAGTAGTGGAGTTCACTACTCCTACTACC ACAACTCATTGGCCCAAACACCCCCTTAGATTTAATAAAAACATACCTGACCAGCATTTGCACA TGCCTTCATCAAAGCACCAATTGTAATATGATCCGGCTCTATAGGATGTAACTCAGCCCCCATT TCTGCAAGCACGTCAAAAGCACGATCCACTGCGCCTGACTGACCACATGCAGTGATAAGTGCAT TGAATACAACTCTGTCTGGCTTCACGTTCTACTGCACAGAATATCTTATCAGCAAGAATTCTTA TTTTTGTTAGAATACAAGTTGAATATTCAGCGTTTAGACAGAATATGTAGCATGCCCTTGTTTG CACGTCCATATATACAAATAAAGTAACAAATAGGCCCAGATAAAATGAGAAAAAAGGAACGTTA AGATCTGTGGTCATACCTTTGACCTCATTATCCCATACACGCCAAATGCCTTTGCGACTTGAGC TGCTCTTGCACAACCATCAATAAGTGCCCCATATGTGTGAACGTTAGGTTCCACACCAGCATTA ACCATTCGGTGGAATACCTAGAAGCAAAAAGCTCAGACAATGCAATGATAACAGGAAACTCATC TTGAAAAATAAAAACCTTTCATACAAGTTTTCGACAAATTAAAATGGAGGAACAATTTCAAAGC ATGTTCCGAAGTTTTTAAGAAGGAAAAGTAAAAAATAAATAATACATTCTTGTTAGGTACTAGA GGAAGTAGTTAAATGTCAGATGGACCAATTAAAAAATGTGTGAGATTCAAATTCACTGCTATCA TAATTTCAGACTGACAGGAAAGACAACTGATGCTTCAACTTTTGTAGTTAAAAGTACTGGAAAA CTCGGCATGTTTTCTTTCCAAGTAGAATTAAGTTAAATATAAATGACAGGAGGTAAAATAATTT TACCAAATTCAATAGTTCAAGATGAGATATCAATAAATCAATAGAAGCTTCATTACATGTAAGA AAGGTGTATTGAAAGTCCATTAAGAAAACCCCCCAGTGAGATAGTCTAAGCATTAGTGAGACCT AAGAACAGGTAACCAAAATGAAAGAAACCATACTTCAAACATTGCATCCACTTTTCCACTTTTG CCACATGTTGAGATTAAAGTAGTGTACAGTTTGCAATCTGCTTTCATTCCAGCCTCCTGGACAA GCCGCACAACTTGGAAAGCTCCTAAATTTACAATGCATAAATTATGCACCCTAAAAGAATGATG GTTGTAAATAGTAAAAGACTGAGATTGTTTCCACACTGAAGGAGTTAAAAGATAGTAAATAATA CATTAACTTACTTTCAGAATCTTGAGAACTTGCACATACAGACATGAGCATATTGAATGTACTC AATGTGGGGTTTTGAATAAGTGCGGTGTACTGAAAAGCTTCCTGAACAGCCTTTTTACTCTTGC AAATATTGAAAAACTTCCCATGATAAATCTACAGCCGAAAAACTCGACAAATTAGTTGTAATTC AGATAAGTCATAAGAAATAGATGATAAAAATGGTCACATTTTACCTTATTCATATCCAATATCC CTTCTTTTTCCATATCTTGAAGTATTCTGATGCAGTCGTGCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.103457037

Conservation Information
Conserved circRNAs	NA
PMCS	0.103457037

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							12618129-12613701(-)
						
					

						Potential amino acid sequence
						
							MEKEGILDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQV
VRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQV
AKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMK
ACANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIF
LSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKL
RLTVSTVNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQ
AKEDGIVPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGI
LDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQE
AGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGV
YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAG
QVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALID
VAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVST
VNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGI
VPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGILDMNKI
YHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKAD
CKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRS
KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAR
EVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAG
KLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALIT
ALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTM
YRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGILDMNKIYHGKFF
NICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTT
LISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPD
RVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMI
HDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAF
EVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALITALSDGE
QLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCIIG
MCLRRIADPSSLDRPLMSLDSTLPQVDSK
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	12618129-12613701(-)
Potential amino acid sequence	MEKEGILDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQV VRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQV AKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMK ACANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIF LSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKL RLTVSTVNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQ AKEDGIVPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGI LDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQE AGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGV YGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAG QVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALID VAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVST VNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGI VPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGILDMNKI YHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKAD CKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRS KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAR EVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAG KLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALIT ALSDGEQLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTM YRCIIGMCLRRIADPSSLDRPLMSLDSTLPQVDSKWLHDCIRILQDMEKEGILDMNKIYHGKFF NICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTT LISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPD RVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMI HDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAF EVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALITALSDGE QLQMAMDILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCIIG MCLRRIADPSSLDRPLMSLDSTLPQVDSK
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa2G258850_circ_g.1

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