Plant Circular RNA Database

Detail information of Zm00001d021770_circ_g.1

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d021770_circ_g.1
					

						ID in PlantcircBase
						zma_circ_009439
					

						Alias
						Zm07circ00082, ZmciR296
					

						Organism
						
							Zea mays						
					

						Position
						
							chr7: 162755320-162759020  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						CIRI2
					

						Parent gene
						
							Zm00001d021770						
					

						Parent gene annotation
						
							Peroxisomal isocitrate dehydrogenase [NADP]
							
					

						Parent gene strand
						-
					

						Alternative splicing
						
							NA						
					

						Support reads
						NA
					

						Tissues
						leaf, endosperm
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d021770_T025:3
Zm00001d021770_T055:4
Zm00001d021770_T044:3
Zm00001d021770_T003:7
Zm00001d021770_T070:4
Zm00001d021770_T089:5
Zm00001d021770_T093:3
Zm00001d021770_T054:5
Zm00001d021770_T081:3
Zm00001d021770_T092:3
Zm00001d021770_T022:3
Zm00001d021770_T053:4
Zm00001d021770_T046:5
Zm00001d021770_T099:4
Zm00001d021770_T066:5
Zm00001d021770_T078:2
Zm00001d021770_T086:4
Zm00001d021770_T006:6
Zm00001d021770_T034:4
Zm00001d021770_T042:3
Zm00001d021770_T010:2
Zm00001d021770_T040:5
Zm00001d021770_T058:3
Zm00001d021770_T007:6
Zm00001d021770_T027:3
Zm00001d021770_T008:2
Zm00001d021770_T029:5
Zm00001d021770_T075:4
Zm00001d021770_T071:4
Zm00001d021770_T047:3
Zm00001d021770_T056:4
Zm00001d021770_T023:3
Zm00001d021770_T076:4
Zm00001d021770_T021:3
Zm00001d021770_T082:4
Zm00001d021770_T085:3
Zm00001d021770_T043:3
Zm00001d021770_T062:4
Zm00001d021770_T001:5
Zm00001d021770_T073:4
Zm00001d021770_T088:3
Zm00001d021770_T002:5
Zm00001d021770_T063:4
Zm00001d021770_T033:3
Zm00001d021770_T015:2
Zm00001d021770_T050:4
Zm00001d021770_T080:3
Zm00001d021770_T096:4
Zm00001d021770_T083:3
Zm00001d021770_T016:5
Zm00001d021770_T005:4
Zm00001d021770_T061:4
Zm00001d021770_T090:4
Zm00001d021770_T014:2
Zm00001d021770_T039:4
Zm00001d021770_T032:4
Zm00001d021770_T012:5
Zm00001d021770_T048:4
Zm00001d021770_T052:4
Zm00001d021770_T095:5
Zm00001d021770_T068:4
Zm00001d021770_T049:4
Zm00001d021770_T013:3
Zm00001d021770_T028:4
Zm00001d021770_T074:5
Zm00001d021770_T060:3
Zm00001d021770_T097:4
Zm00001d021770_T065:5
Zm00001d021770_T019:5
Zm00001d021770_T094:2
Zm00001d021770_T020:5
Zm00001d021770_T045:3
Zm00001d021770_T031:4
Zm00001d021770_T072:4
Zm00001d021770_T087:4
Zm00001d021770_T100:1
Zm00001d021770_T077:2
Zm00001d021770_T064:4
Zm00001d021770_T069:3
Zm00001d021770_T009:4
Zm00001d021770_T036:3
Zm00001d021770_T037:4
Zm00001d021770_T091:4
Zm00001d021770_T098:4
Zm00001d021770_T059:4
Zm00001d021770_T030:6
Zm00001d021770_T057:5
Zm00001d021770_T024:4
Zm00001d021770_T084:4
Zm00001d021770_T026:3
Zm00001d021770_T038:3
Zm00001d021770_T041:4
Zm00001d021770_T018:3
Zm00001d021770_T079:4
Zm00001d021770_T067:4
Zm00001d021770_T011:4
Zm00001d021770_T004:5
Zm00001d021770_T051:2
Zm00001d021770_T017:4
Zm00001d021770_T035:4

					

			
		

General Information
CircRNA Name	Zm00001d021770_circ_g.1
ID in PlantcircBase	zma_circ_009439
Alias	Zm07circ00082, ZmciR296
Organism	Zea mays
Position	chr7: 162755320-162759020 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d021770
Parent gene annotation	Peroxisomal isocitrate dehydrogenase [NADP]
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d021770_T025:3 Zm00001d021770_T055:4 Zm00001d021770_T044:3 Zm00001d021770_T003:7 Zm00001d021770_T070:4 Zm00001d021770_T089:5 Zm00001d021770_T093:3 Zm00001d021770_T054:5 Zm00001d021770_T081:3 Zm00001d021770_T092:3 Zm00001d021770_T022:3 Zm00001d021770_T053:4 Zm00001d021770_T046:5 Zm00001d021770_T099:4 Zm00001d021770_T066:5 Zm00001d021770_T078:2 Zm00001d021770_T086:4 Zm00001d021770_T006:6 Zm00001d021770_T034:4 Zm00001d021770_T042:3 Zm00001d021770_T010:2 Zm00001d021770_T040:5 Zm00001d021770_T058:3 Zm00001d021770_T007:6 Zm00001d021770_T027:3 Zm00001d021770_T008:2 Zm00001d021770_T029:5 Zm00001d021770_T075:4 Zm00001d021770_T071:4 Zm00001d021770_T047:3 Zm00001d021770_T056:4 Zm00001d021770_T023:3 Zm00001d021770_T076:4 Zm00001d021770_T021:3 Zm00001d021770_T082:4 Zm00001d021770_T085:3 Zm00001d021770_T043:3 Zm00001d021770_T062:4 Zm00001d021770_T001:5 Zm00001d021770_T073:4 Zm00001d021770_T088:3 Zm00001d021770_T002:5 Zm00001d021770_T063:4 Zm00001d021770_T033:3 Zm00001d021770_T015:2 Zm00001d021770_T050:4 Zm00001d021770_T080:3 Zm00001d021770_T096:4 Zm00001d021770_T083:3 Zm00001d021770_T016:5 Zm00001d021770_T005:4 Zm00001d021770_T061:4 Zm00001d021770_T090:4 Zm00001d021770_T014:2 Zm00001d021770_T039:4 Zm00001d021770_T032:4 Zm00001d021770_T012:5 Zm00001d021770_T048:4 Zm00001d021770_T052:4 Zm00001d021770_T095:5 Zm00001d021770_T068:4 Zm00001d021770_T049:4 Zm00001d021770_T013:3 Zm00001d021770_T028:4 Zm00001d021770_T074:5 Zm00001d021770_T060:3 Zm00001d021770_T097:4 Zm00001d021770_T065:5 Zm00001d021770_T019:5 Zm00001d021770_T094:2 Zm00001d021770_T020:5 Zm00001d021770_T045:3 Zm00001d021770_T031:4 Zm00001d021770_T072:4 Zm00001d021770_T087:4 Zm00001d021770_T100:1 Zm00001d021770_T077:2 Zm00001d021770_T064:4 Zm00001d021770_T069:3 Zm00001d021770_T009:4 Zm00001d021770_T036:3 Zm00001d021770_T037:4 Zm00001d021770_T091:4 Zm00001d021770_T098:4 Zm00001d021770_T059:4 Zm00001d021770_T030:6 Zm00001d021770_T057:5 Zm00001d021770_T024:4 Zm00001d021770_T084:4 Zm00001d021770_T026:3 Zm00001d021770_T038:3 Zm00001d021770_T041:4 Zm00001d021770_T018:3 Zm00001d021770_T079:4 Zm00001d021770_T067:4 Zm00001d021770_T011:4 Zm00001d021770_T004:5 Zm00001d021770_T051:2 Zm00001d021770_T017:4 Zm00001d021770_T035:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCTGCAGAAAAATGTACTTACAGTCAAGATAGCAAGAAGACTACGTGTATCTACTAATTCTGGT
GGAAGAGGCCCAGATCAATTATTGTTATCAACAAGGcttaatatacttcttgcgttatcctatg
cagcacagtgttggaagtagagatggcaatttgtccaaagcagaaatctccataaaccctagaa
caagcaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2955
Transcript exons: 162755320-162755872,162756287-162756531,162756594-162758
671,162758942-162759020
CTTAATATACTTCTTGCGTTATCCTATGCAGCACAGTGTTGGAAGTAGAGATGGCAATTTGTCC
AAAGCAGAAATCTCCATAAACCCTAGAACAAGCAAACACATTGAAGTGCACAGAGAGAGTAGAA
GGCAAAGTGCGCACCTGCACTCCAAAAACCAGGGCACCAGCAAAAACGCCAGAGAGAGTCTCGA
TGCCAAAGAGGTTCCATCAATGAGGGAGTCAGCATGACCAGAGCACCCCAAGGAATCATCTCCT
TGATGGAAGAAGCATCAGTGCAAATCTTCACATAGGTTGCATAGTCAGGCTTGCTTGTTCACTC
CATCAACCCAAGAATGGTGTTGAACTGCCTGCGAACCTCCTCCACCATCTTTAGGGCGACACTT
CCAACACTCTTCATGGTCATGACAGAGAACCAGTACAAAAACATGTCTCCAACAATCAAACCAA
TGAAAACCTTCAGGAGAGAACATCGACAACCTTCACTCCAGCTCTGCTAACGAAGGCACCAAAC
AGCACCAGGGACACAAGAGCACCTGAACCAATGGCAAATCCCTTTCTAATAGCAACAGTTGTGT
TGTCAGCAGCACCAAGAGCATAAGTTCTCTCAGATTTTGTGGCTCATTCCTGCCATCTCAACAA
TACCACCAGCATTGTCACTGATTGGACCATCTCAGCAATATCATAGTGATGTTTGACCTTGACA
GTGAATCAGTTAATTCTAGCAGAGCTGCTTTATGGAGCCTCTGATGCTAATGATATGGCAAGTC
ATTGGAAATTTGGATTGGATAAAAAATAATCTTAAGCATATCTTGTACATGCCGACCATCCTGC
ATTGCATATATCACGGCAAATCGATTGGAATGAAATAAAAAATCAATGGAAGCATGCAGGGAGA
GGGCTCGGACTGGATCACCTTGTACATGTTGATCTTGGTGATCTGGTAGGAGACATCGCGCCAG
GTGGTCTTGGCGACATTGTCGCTACTTCCTCTCCTCCCTTCTTTAGAGCAGCAGCACACCACCT
CACTCGATGTTCTTGATGGAGCACGTGAGCGACACCCGCCCTGTGGACCCACCTATGTCGCGCA
TGTCGAAGGTGACGGCGATGTAACCCCGCAGCGCAATGCCCTCCGCCATCCCCCTCAATATTAG
TACTAAAATATTTGACAACTAATATCCTGATGTGAATTGAGTAGCGGATTTCTCACTCTAAAAT
GAAGATACAATACTAAAAGCATTTAATAAATAATATTGGGAAAACATATGTTTTTGAAAGGCTG
CAAGTTAATGTAAAAGGATAATTTATGATTGTAAGATGTCCAAAAACCGAGAAAGGAAACATTG
CATTTAATCTGGACTTACAAGTACCCAAATTTAGGTATGACACTCAAATCTGGAACAACCCAAA
CTATAGTTTCTTAGACTCCTGGTAACATGTAAAAGGATGGTTTACTCAACACGTCTTGATTTGA
GTTTAAACATGATGTTGATTGTGTGGTGCTTGTCCTTGAATGAATATAATGAAGTAATTGTTGT
TTCAGTTATCAGTGAAAATGATCTCCACAGAATGAAAGAAGACTACCTATAAAATTTTAAATGT
AATGTTTTTCGATATTTTTTTAAATATAAATATTTCCAGATAAATGGACCAGTTGCATCCAACT
ATTTGGCAGCTATAGGCTGCAATAGAAGAGGAGTCAGTGTAAAAACGAGCTTTTTGTTGCACAC
GGAGCAAATTCGTTCTTATCTATGTGATGCCCTGAACTTTGATATACTACCTATCTCAACTAAA
AGCATAAGCCATTTGGCAAATACAAACACTTTTATTCAAAATATTCTTCTTTTAACCTTAGGTT
TGTACTCACCAATGCCTACACTTTTAATCAAGGTTATTAAAACGACGAAACGTTGAAACGCTCA
TGGGTAAGTTTTAACTTTTAAACGGTTTAAACAAAGTTTAAATGTAGTTTTAAACAACATAGGG
AAATTTCAATATATCATAATTTCAGGCAATTATATCAAGTCAAATACCAAACAGTGGGACAGTC
AGTCTCTGTACTCTGTAGTCCTGCCGCAGTGGGACAGCAGAGGCGGGGCTGGAGGGGCTGGCAG
CCGGACAGGCGGCGCAGGAGGGAGGACGGCCTGGAGCGCGGCGGCCTGGAGCGGTGGCACGCAG
AGGCTCTGAGGCGGGGCTGGAGGACGGCCTTGAGAGCAGCGGCCTGGAGCGGCCTGGAGAGCAG
CGGCCTGGAGGGAGGACGGCCTGGAGAGCAGCTGACTGGAGCGGCGGCGGCCTGGAGCAGCGGC
ACGCAGAGGCGGGCCTGGCGGCGCCGGACGGGCGGCGCAGGAGGGTTGGAGCAGCGGCGGCCTG
GAGGCTGGAGCGCGCCCTGGAGTGCGACGGCTGGTGAGAACGCGAGTTACTAATTGGGCTGGTG
AAAGTGCGGCTTGTAGCGGCGGTCTGGGTGGGCTGGGCGGGAGTTTCTAATTGGGCTGGGCCAA
TTACTAGCAGCAGACGCATTAAACGCGGCGTTTCACTCTATACCGCGTTTAAACGTCAAAACGC
GACGTTTAAACGACGTTAAACAACGTTTTACGACGAATCGTAAAACGTTTTGTCGTTTCACTTC
CTGTCAGCGTTTTATAGTTTAAACGACGTTTAAACGTCGTTTTAACGTCGTTTTAATAAGCATG
CTTTTAATGATTGTTCTCAATAACAGAAGTTGTAATAGCTGTTAAATTCTTTTGCCCTCATCTA
CCTCAAATTCTGAAAAGAGAGAACATGAGCGAAAAGGTTGTTACACTCACAGCTTTAGAAGTGT
TTGTATGTTGTTGTATTCAGCAGGATGGAGCTTCCACTGAAGTTGTTATTATCAGCCTGAAGTC
AAGATAGCAAGAAGACTACGTGTATCTACTAATTCTGGTGGAAGAGGCCCAGATCAATTATTGT
TATCAACAAGG
						
					

						Genomic sequence
						
							CTTAATATACTTCTTGCGTTATCCTATGCAGCACAGTGTTGGAAGTAGAGATGGCAATTTGTCC
AAAGCAGAAATCTCCATAAACCCTAGAACAAGCAAACACATTGAAGTGCACAGAGAGAGTAGAA
GGCAAAGTGCGCACCTGCACTCCAAAAACCAGGGCACCAGCAAAAACGCCAGAGAGAGTCTCGA
TGCCAAAGAGGTTCCATCAATGAGGGAGTCAGCATGACCAGAGCACCCCAAGGAATCATCTCCT
TGATGGAAGAAGCATCAGTGCAAATCTTCACATAGGTTGCATAGTCAGGCTTGCTTGTTCACTC
CATCAACCCAAGAATGGTGTTGAACTGCCTGCGAACCTCCTCCACCATCTTTAGGGCGACACTT
CCAACACTCTTCATGGTCATGACAGAGAACCAGTACAAAAACATGTCTCCAACAATCAAACCAA
TGAAAACCTTCAGGAGAGAACATCGACAACCTTCACTCCAGCTCTGCTAACGAAGGCACCAAAC
AGCACCAGGGACACAAGAGCACCTGAACCAATGGCAAATCCCTGCAAAAGGAAACAGATGAATT
AAGTTACCAGAGGCGTACAATAGTTCTTTTGTTGCAGATTATCTACTATTCCCTCAATTCCAAA
TTATAAGATGTTTTGGCTCTTCAAGATAGGTAGCTTTTGCCATGCATTTGAATATATATTATGT
CTAGGTACATAACAAAAACAACGCATATACCAAAACGTCTAATAGTAGTTTGGAATAGAGGGAG
TACTACATAGAGATAAAGATGAATTAGGTTACCAGACGAGTACAATGGTTCTTTTGTTGTATAT
TATCCGCTACTACTACTTCATTAGTTCATTCTCATATGTTAAAATATTAAGAAATACATACCCT
ACCAATAGTGCCAATGATGGCAGTGACAAATGAACACATTGAGCCAACAAATGGATAAAAAGCA
TGTCTACCTTTCTAATAGCAACAGTTGTGTTGTCAGCAGCACCAAGAGCATAAGTTCTCTCAGA
TTTTGTGGCTCATTCCTGCCATCTCAACAATACCACCAGCATTGTCACTGATTGGACCATCTCA
GCAATATCATAGTGATGTTTGACCTTGACAGTGAATCAGTTAATTCTAGCAGAGCTGCTTTATG
GAGCCTCTGATGCTAATGATATGGCAAGTCATTGGAAATTTGGATTGGATAAAAAATAATCTAT
TTAGATTAAACAAATTCAAGCCCAAGAAATATATGCACATCCTGAATTACAACCTCACCTTAAG
CATATCTTGTACATGCCGACCATCCTGCATTGCATATATCACGGCAAATCGATTGGAATGAAAT
AAAAAATCAATGGAAGCATGCAGGGAGAGGGCTCGGACTGGATCACCTTGTACATGTTGATCTT
GGTGATCTGGTAGGAGACATCGCGCCAGGTGGTCTTGGCGACATTGTCGCTACTTCCTCTCCTC
CCTTCTTTAGAGCAGCAGCACACCACCTCACTCGATGTTCTTGATGGAGCACGTGAGCGACACC
CGCCCTGTGGACCCACCTATGTCGCGCATGTCGAAGGTGACGGCGATGTAACCCCGCAGCGCAA
TGCCCTCCGCCATCCCCCTCAATATTAGTACTAAAATATTTGACAACTAATATCCTGATGTGAA
TTGAGTAGCGGATTTCTCACTCTAAAATGAAGATACAATACTAAAAGCATTTAATAAATAATAT
TGGGAAAACATATGTTTTTGAAAGGCTGCAAGTTAATGTAAAAGGATAATTTATGATTGTAAGA
TGTCCAAAAACCGAGAAAGGAAACATTGCATTTAATCTGGACTTACAAGTACCCAAATTTAGGT
ATGACACTCAAATCTGGAACAACCCAAACTATAGTTTCTTAGACTCCTGGTAACATGTAAAAGG
ATGGTTTACTCAACACGTCTTGATTTGAGTTTAAACATGATGTTGATTGTGTGGTGCTTGTCCT
TGAATGAATATAATGAAGTAATTGTTGTTTCAGTTATCAGTGAAAATGATCTCCACAGAATGAA
AGAAGACTACCTATAAAATTTTAAATGTAATGTTTTTCGATATTTTTTTAAATATAAATATTTC
CAGATAAATGGACCAGTTGCATCCAACTATTTGGCAGCTATAGGCTGCAATAGAAGAGGAGTCA
GTGTAAAAACGAGCTTTTTGTTGCACACGGAGCAAATTCGTTCTTATCTATGTGATGCCCTGAA
CTTTGATATACTACCTATCTCAACTAAAAGCATAAGCCATTTGGCAAATACAAACACTTTTATT
CAAAATATTCTTCTTTTAACCTTAGGTTTGTACTCACCAATGCCTACACTTTTAATCAAGGTTA
TTAAAACGACGAAACGTTGAAACGCTCATGGGTAAGTTTTAACTTTTAAACGGTTTAAACAAAG
TTTAAATGTAGTTTTAAACAACATAGGGAAATTTCAATATATCATAATTTCAGGCAATTATATC
AAGTCAAATACCAAACAGTGGGACAGTCAGTCTCTGTACTCTGTAGTCCTGCCGCAGTGGGACA
GCAGAGGCGGGGCTGGAGGGGCTGGCAGCCGGACAGGCGGCGCAGGAGGGAGGACGGCCTGGAG
CGCGGCGGCCTGGAGCGGTGGCACGCAGAGGCTCTGAGGCGGGGCTGGAGGACGGCCTTGAGAG
CAGCGGCCTGGAGCGGCCTGGAGAGCAGCGGCCTGGAGGGAGGACGGCCTGGAGAGCAGCTGAC
TGGAGCGGCGGCGGCCTGGAGCAGCGGCACGCAGAGGCGGGCCTGGCGGCGCCGGACGGGCGGC
GCAGGAGGGTTGGAGCAGCGGCGGCCTGGAGGCTGGAGCGCGCCCTGGAGTGCGACGGCTGGTG
AGAACGCGAGTTACTAATTGGGCTGGTGAAAGTGCGGCTTGTAGCGGCGGTCTGGGTGGGCTGG
GCGGGAGTTTCTAATTGGGCTGGGCCAATTACTAGCAGCAGACGCATTAAACGCGGCGTTTCAC
TCTATACCGCGTTTAAACGTCAAAACGCGACGTTTAAACGACGTTAAACAACGTTTTACGACGA
ATCGTAAAACGTTTTGTCGTTTCACTTCCTGTCAGCGTTTTATAGTTTAAACGACGTTTAAACG
TCGTTTTAACGTCGTTTTAATAAGCATGCTTTTAATGATTGTTCTCAATAACAGAAGTTGTAAT
AGCTGTTAAATTCTTTTGCCCTCATCTACCTCAAATTCTGAAAAGAGAGAACATGAGCGAAAAG
GTTGTTACACTCACAGCTTTAGAAGTGTTTGTATGTTGTTGTATTCAGCAGGATGGAGCTTCCA
CTGAAGTTGTTATTATCAGCCTGACTATAAGTACACAGATACATAGATATGAGAAATATTTGTC
ATAGATAACAAAAAAGTCTAATCTATACAGAATAAACAAAAAAAATCAAAGACAAAGGCCTGGA
TCATTATCTCCTTAGCATGCCATTAGATTTACATAAGCAAGTGAAGTGTACTCATGAAATTGGT
GTATATTACTTAAATTTCTTAAACATCTAGAGCCAGAGGAACCTCAAGATATCATGAACAAGTA
CAAATCCTTAACATTGTGCTGCAGAAAAATGTACTTACAGTCAAGATAGCAAGAAGACTACGTG
TATCTACTAATTCTGGTGGAAGAGGCCCAGATCAATTATTGTTATCAACAAGG
						
					

			
		

Sequences
Splice junction sequence	GCTGCAGAAAAATGTACTTACAGTCAAGATAGCAAGAAGACTACGTGTATCTACTAATTCTGGT GGAAGAGGCCCAGATCAATTATTGTTATCAACAAGGcttaatatacttcttgcgttatcctatg cagcacagtgttggaagtagagatggcaatttgtccaaagcagaaatctccataaaccctagaa caagcaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2955 Transcript exons: 162755320-162755872,162756287-162756531,162756594-162758 671,162758942-162759020 CTTAATATACTTCTTGCGTTATCCTATGCAGCACAGTGTTGGAAGTAGAGATGGCAATTTGTCC AAAGCAGAAATCTCCATAAACCCTAGAACAAGCAAACACATTGAAGTGCACAGAGAGAGTAGAA GGCAAAGTGCGCACCTGCACTCCAAAAACCAGGGCACCAGCAAAAACGCCAGAGAGAGTCTCGA TGCCAAAGAGGTTCCATCAATGAGGGAGTCAGCATGACCAGAGCACCCCAAGGAATCATCTCCT TGATGGAAGAAGCATCAGTGCAAATCTTCACATAGGTTGCATAGTCAGGCTTGCTTGTTCACTC CATCAACCCAAGAATGGTGTTGAACTGCCTGCGAACCTCCTCCACCATCTTTAGGGCGACACTT CCAACACTCTTCATGGTCATGACAGAGAACCAGTACAAAAACATGTCTCCAACAATCAAACCAA TGAAAACCTTCAGGAGAGAACATCGACAACCTTCACTCCAGCTCTGCTAACGAAGGCACCAAAC AGCACCAGGGACACAAGAGCACCTGAACCAATGGCAAATCCCTTTCTAATAGCAACAGTTGTGT TGTCAGCAGCACCAAGAGCATAAGTTCTCTCAGATTTTGTGGCTCATTCCTGCCATCTCAACAA TACCACCAGCATTGTCACTGATTGGACCATCTCAGCAATATCATAGTGATGTTTGACCTTGACA GTGAATCAGTTAATTCTAGCAGAGCTGCTTTATGGAGCCTCTGATGCTAATGATATGGCAAGTC ATTGGAAATTTGGATTGGATAAAAAATAATCTTAAGCATATCTTGTACATGCCGACCATCCTGC ATTGCATATATCACGGCAAATCGATTGGAATGAAATAAAAAATCAATGGAAGCATGCAGGGAGA GGGCTCGGACTGGATCACCTTGTACATGTTGATCTTGGTGATCTGGTAGGAGACATCGCGCCAG GTGGTCTTGGCGACATTGTCGCTACTTCCTCTCCTCCCTTCTTTAGAGCAGCAGCACACCACCT CACTCGATGTTCTTGATGGAGCACGTGAGCGACACCCGCCCTGTGGACCCACCTATGTCGCGCA TGTCGAAGGTGACGGCGATGTAACCCCGCAGCGCAATGCCCTCCGCCATCCCCCTCAATATTAG TACTAAAATATTTGACAACTAATATCCTGATGTGAATTGAGTAGCGGATTTCTCACTCTAAAAT GAAGATACAATACTAAAAGCATTTAATAAATAATATTGGGAAAACATATGTTTTTGAAAGGCTG CAAGTTAATGTAAAAGGATAATTTATGATTGTAAGATGTCCAAAAACCGAGAAAGGAAACATTG CATTTAATCTGGACTTACAAGTACCCAAATTTAGGTATGACACTCAAATCTGGAACAACCCAAA CTATAGTTTCTTAGACTCCTGGTAACATGTAAAAGGATGGTTTACTCAACACGTCTTGATTTGA GTTTAAACATGATGTTGATTGTGTGGTGCTTGTCCTTGAATGAATATAATGAAGTAATTGTTGT TTCAGTTATCAGTGAAAATGATCTCCACAGAATGAAAGAAGACTACCTATAAAATTTTAAATGT AATGTTTTTCGATATTTTTTTAAATATAAATATTTCCAGATAAATGGACCAGTTGCATCCAACT ATTTGGCAGCTATAGGCTGCAATAGAAGAGGAGTCAGTGTAAAAACGAGCTTTTTGTTGCACAC GGAGCAAATTCGTTCTTATCTATGTGATGCCCTGAACTTTGATATACTACCTATCTCAACTAAA AGCATAAGCCATTTGGCAAATACAAACACTTTTATTCAAAATATTCTTCTTTTAACCTTAGGTT TGTACTCACCAATGCCTACACTTTTAATCAAGGTTATTAAAACGACGAAACGTTGAAACGCTCA TGGGTAAGTTTTAACTTTTAAACGGTTTAAACAAAGTTTAAATGTAGTTTTAAACAACATAGGG AAATTTCAATATATCATAATTTCAGGCAATTATATCAAGTCAAATACCAAACAGTGGGACAGTC AGTCTCTGTACTCTGTAGTCCTGCCGCAGTGGGACAGCAGAGGCGGGGCTGGAGGGGCTGGCAG CCGGACAGGCGGCGCAGGAGGGAGGACGGCCTGGAGCGCGGCGGCCTGGAGCGGTGGCACGCAG AGGCTCTGAGGCGGGGCTGGAGGACGGCCTTGAGAGCAGCGGCCTGGAGCGGCCTGGAGAGCAG CGGCCTGGAGGGAGGACGGCCTGGAGAGCAGCTGACTGGAGCGGCGGCGGCCTGGAGCAGCGGC ACGCAGAGGCGGGCCTGGCGGCGCCGGACGGGCGGCGCAGGAGGGTTGGAGCAGCGGCGGCCTG GAGGCTGGAGCGCGCCCTGGAGTGCGACGGCTGGTGAGAACGCGAGTTACTAATTGGGCTGGTG AAAGTGCGGCTTGTAGCGGCGGTCTGGGTGGGCTGGGCGGGAGTTTCTAATTGGGCTGGGCCAA TTACTAGCAGCAGACGCATTAAACGCGGCGTTTCACTCTATACCGCGTTTAAACGTCAAAACGC GACGTTTAAACGACGTTAAACAACGTTTTACGACGAATCGTAAAACGTTTTGTCGTTTCACTTC CTGTCAGCGTTTTATAGTTTAAACGACGTTTAAACGTCGTTTTAACGTCGTTTTAATAAGCATG CTTTTAATGATTGTTCTCAATAACAGAAGTTGTAATAGCTGTTAAATTCTTTTGCCCTCATCTA CCTCAAATTCTGAAAAGAGAGAACATGAGCGAAAAGGTTGTTACACTCACAGCTTTAGAAGTGT TTGTATGTTGTTGTATTCAGCAGGATGGAGCTTCCACTGAAGTTGTTATTATCAGCCTGAAGTC AAGATAGCAAGAAGACTACGTGTATCTACTAATTCTGGTGGAAGAGGCCCAGATCAATTATTGT TATCAACAAGG
Genomic sequence	CTTAATATACTTCTTGCGTTATCCTATGCAGCACAGTGTTGGAAGTAGAGATGGCAATTTGTCC AAAGCAGAAATCTCCATAAACCCTAGAACAAGCAAACACATTGAAGTGCACAGAGAGAGTAGAA GGCAAAGTGCGCACCTGCACTCCAAAAACCAGGGCACCAGCAAAAACGCCAGAGAGAGTCTCGA TGCCAAAGAGGTTCCATCAATGAGGGAGTCAGCATGACCAGAGCACCCCAAGGAATCATCTCCT TGATGGAAGAAGCATCAGTGCAAATCTTCACATAGGTTGCATAGTCAGGCTTGCTTGTTCACTC CATCAACCCAAGAATGGTGTTGAACTGCCTGCGAACCTCCTCCACCATCTTTAGGGCGACACTT CCAACACTCTTCATGGTCATGACAGAGAACCAGTACAAAAACATGTCTCCAACAATCAAACCAA TGAAAACCTTCAGGAGAGAACATCGACAACCTTCACTCCAGCTCTGCTAACGAAGGCACCAAAC AGCACCAGGGACACAAGAGCACCTGAACCAATGGCAAATCCCTGCAAAAGGAAACAGATGAATT AAGTTACCAGAGGCGTACAATAGTTCTTTTGTTGCAGATTATCTACTATTCCCTCAATTCCAAA TTATAAGATGTTTTGGCTCTTCAAGATAGGTAGCTTTTGCCATGCATTTGAATATATATTATGT CTAGGTACATAACAAAAACAACGCATATACCAAAACGTCTAATAGTAGTTTGGAATAGAGGGAG TACTACATAGAGATAAAGATGAATTAGGTTACCAGACGAGTACAATGGTTCTTTTGTTGTATAT TATCCGCTACTACTACTTCATTAGTTCATTCTCATATGTTAAAATATTAAGAAATACATACCCT ACCAATAGTGCCAATGATGGCAGTGACAAATGAACACATTGAGCCAACAAATGGATAAAAAGCA TGTCTACCTTTCTAATAGCAACAGTTGTGTTGTCAGCAGCACCAAGAGCATAAGTTCTCTCAGA TTTTGTGGCTCATTCCTGCCATCTCAACAATACCACCAGCATTGTCACTGATTGGACCATCTCA GCAATATCATAGTGATGTTTGACCTTGACAGTGAATCAGTTAATTCTAGCAGAGCTGCTTTATG GAGCCTCTGATGCTAATGATATGGCAAGTCATTGGAAATTTGGATTGGATAAAAAATAATCTAT TTAGATTAAACAAATTCAAGCCCAAGAAATATATGCACATCCTGAATTACAACCTCACCTTAAG CATATCTTGTACATGCCGACCATCCTGCATTGCATATATCACGGCAAATCGATTGGAATGAAAT AAAAAATCAATGGAAGCATGCAGGGAGAGGGCTCGGACTGGATCACCTTGTACATGTTGATCTT GGTGATCTGGTAGGAGACATCGCGCCAGGTGGTCTTGGCGACATTGTCGCTACTTCCTCTCCTC CCTTCTTTAGAGCAGCAGCACACCACCTCACTCGATGTTCTTGATGGAGCACGTGAGCGACACC CGCCCTGTGGACCCACCTATGTCGCGCATGTCGAAGGTGACGGCGATGTAACCCCGCAGCGCAA TGCCCTCCGCCATCCCCCTCAATATTAGTACTAAAATATTTGACAACTAATATCCTGATGTGAA TTGAGTAGCGGATTTCTCACTCTAAAATGAAGATACAATACTAAAAGCATTTAATAAATAATAT TGGGAAAACATATGTTTTTGAAAGGCTGCAAGTTAATGTAAAAGGATAATTTATGATTGTAAGA TGTCCAAAAACCGAGAAAGGAAACATTGCATTTAATCTGGACTTACAAGTACCCAAATTTAGGT ATGACACTCAAATCTGGAACAACCCAAACTATAGTTTCTTAGACTCCTGGTAACATGTAAAAGG ATGGTTTACTCAACACGTCTTGATTTGAGTTTAAACATGATGTTGATTGTGTGGTGCTTGTCCT TGAATGAATATAATGAAGTAATTGTTGTTTCAGTTATCAGTGAAAATGATCTCCACAGAATGAA AGAAGACTACCTATAAAATTTTAAATGTAATGTTTTTCGATATTTTTTTAAATATAAATATTTC CAGATAAATGGACCAGTTGCATCCAACTATTTGGCAGCTATAGGCTGCAATAGAAGAGGAGTCA GTGTAAAAACGAGCTTTTTGTTGCACACGGAGCAAATTCGTTCTTATCTATGTGATGCCCTGAA CTTTGATATACTACCTATCTCAACTAAAAGCATAAGCCATTTGGCAAATACAAACACTTTTATT CAAAATATTCTTCTTTTAACCTTAGGTTTGTACTCACCAATGCCTACACTTTTAATCAAGGTTA TTAAAACGACGAAACGTTGAAACGCTCATGGGTAAGTTTTAACTTTTAAACGGTTTAAACAAAG TTTAAATGTAGTTTTAAACAACATAGGGAAATTTCAATATATCATAATTTCAGGCAATTATATC AAGTCAAATACCAAACAGTGGGACAGTCAGTCTCTGTACTCTGTAGTCCTGCCGCAGTGGGACA GCAGAGGCGGGGCTGGAGGGGCTGGCAGCCGGACAGGCGGCGCAGGAGGGAGGACGGCCTGGAG CGCGGCGGCCTGGAGCGGTGGCACGCAGAGGCTCTGAGGCGGGGCTGGAGGACGGCCTTGAGAG CAGCGGCCTGGAGCGGCCTGGAGAGCAGCGGCCTGGAGGGAGGACGGCCTGGAGAGCAGCTGAC TGGAGCGGCGGCGGCCTGGAGCAGCGGCACGCAGAGGCGGGCCTGGCGGCGCCGGACGGGCGGC GCAGGAGGGTTGGAGCAGCGGCGGCCTGGAGGCTGGAGCGCGCCCTGGAGTGCGACGGCTGGTG AGAACGCGAGTTACTAATTGGGCTGGTGAAAGTGCGGCTTGTAGCGGCGGTCTGGGTGGGCTGG GCGGGAGTTTCTAATTGGGCTGGGCCAATTACTAGCAGCAGACGCATTAAACGCGGCGTTTCAC TCTATACCGCGTTTAAACGTCAAAACGCGACGTTTAAACGACGTTAAACAACGTTTTACGACGA ATCGTAAAACGTTTTGTCGTTTCACTTCCTGTCAGCGTTTTATAGTTTAAACGACGTTTAAACG TCGTTTTAACGTCGTTTTAATAAGCATGCTTTTAATGATTGTTCTCAATAACAGAAGTTGTAAT AGCTGTTAAATTCTTTTGCCCTCATCTACCTCAAATTCTGAAAAGAGAGAACATGAGCGAAAAG GTTGTTACACTCACAGCTTTAGAAGTGTTTGTATGTTGTTGTATTCAGCAGGATGGAGCTTCCA CTGAAGTTGTTATTATCAGCCTGACTATAAGTACACAGATACATAGATATGAGAAATATTTGTC ATAGATAACAAAAAAGTCTAATCTATACAGAATAAACAAAAAAAATCAAAGACAAAGGCCTGGA TCATTATCTCCTTAGCATGCCATTAGATTTACATAAGCAAGTGAAGTGTACTCATGAAATTGGT GTATATTACTTAAATTTCTTAAACATCTAGAGCCAGAGGAACCTCAAGATATCATGAACAAGTA CAAATCCTTAACATTGTGCTGCAGAAAAATGTACTTACAGTCAAGATAGCAAGAAGACTACGTG TATCTACTAATTCTGGTGGAAGAGGCCCAGATCAATTATTGTTATCAACAAGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.179678781

Conservation Information
Conserved circRNAs	NA
PMCS	0.179678781

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d021770_circ_g.1

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