Plant Circular RNA Database

Detail information of LOC18050829_circ_g.1

			
						 General Information
					
						CircRNA Name
						LOC18050829_circ_g.1
					
						ID in PlantcircBase
						ptr_circ_000086
					
						Alias
						circRNA086
					
						Organism
						
							Poncirus trifoliata						
					
						Position
						
							chrNW_006262688.1: 19906531-19910971  JBrowse»						
					
						Reference genome
						
							Citrus_clementina_v1.0						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							LOC18050829						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						shoots
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						XM_024190354.1:8
XM_006447323.2:8

General Information
CircRNA Name	LOC18050829_circ_g.1
ID in PlantcircBase	ptr_circ_000086
Alias	circRNA086
Organism	Poncirus trifoliata
Position	chrNW_006262688.1: 19906531-19910971 JBrowse»
Reference genome	Citrus_clementina_v1.0
Type	e-circRNA
Identification method	CIRI
Parent gene	LOC18050829
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	shoots
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	XM_024190354.1:8 XM_006447323.2:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGAGATGAATGATGCAACACATGGTGCTGACAACATCAGAAATGATATCAGTGCTCTTGCTCAA
AGATATGCTGTCATCGACCGCGACGAGGACTGTGGGataaatcgattactcttggaagatgaca
ctgctttggagaatcgaagttcagagtaccaatcaattatgagagagttccgtgctttcctgag
tgattgca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATAAATCGATTACTCTTGGAAGATGACACTGCTTTGGAGAATCGAAGTTCAGAGTACCAATCAA
TTATGAGAGAGTTCCGTGCTTTCCTGAGTGATTGCAAGGATGTATTGGATGAGGCAACTACAAT
GAAACTTTTAGAAAGGTAATTAATTTGCAAGTATTGACAGTGTTCACAATCAGTTTTTCTCCTT
TAGACCATTATGCATGTTATAGAAATTATGTCAAATTACCTGCCAAACATTTCCAATTCTTAGT
AACTGCCTCTTCCTTCCTTGAGTTCTCGTGTAACAAGTAGGCCATTTTAGTTGCTTAATCAAAT
ACATGGATTTTGGAAATTGTTATGCTTCTTAAGCATCTGGCAATTTGAAGTATATTTCAGTTTT
TCTTGTTCGGTTTTGCAAGCATTGTAAGAATTGATGCACTGTGATGCCTAAAATCAAATATTTA
TACCTATTTCTTGTACTTATGATTTCACCGTAATTTGCTTTTGCAAAATCAAAAGTAGCCTAAA
CACTCTTTCAATTATTATTATTGTAATTTTTTCCTTTTTTTTTATGGTACAATATTCTGCAGCT
ATGGTAGAGTTGAAGAACTGGTATTTTTTGCTAGTTTGAAGGAGCAGCACGAGATCGTAGTTCA
TCATTATATCCAGGTACTTTTATTTCCATTTTGAAATATTTACTTGTGGGATACTGTTCTATTC
ATTACCCATTCTTCTCCTCATGGATATTTACCAGTTGAGTTTTTCCTTTTCTAACTATTTTCAG
TATTTGGACTTATTTTATTTACTTTTGCCCCATAAAGTTATCTGGAAATTGTTTTTTTTTTCCT
TTTAGCTGGTGCCAAAAATCCAATTTTTTTTTTTTTTCCCCTTTGAGGTTTGTCCTTGGGTAAG
CTTTCCCTGTTGTGTAATCTTTCCCTTTGGTTGATAGTGGATATTGTTAACAAGAGAGAGGAGC
TAATTTGGTATGGAATTAATTTATATGGTTAACATTGCAGATTCAGATGATCCATTACTGTTTT
ATTTAAAGTTTTGCAACAAGATTATTCTTGAATTTGACTTGAAGTTATCTATCCATTTATTTGC
TTATGTATTTTGTTTCATTCAGCAAGGAGAAGCCAAAAAAGCATTGCAAATGCTTCGAAAACCT
GCTGTCCCAATAGATCTTCAGGTACAGATCAAATTCCGGATTTGGAACATCGAACCTTTAGGAC
TTTACCCATCACTTCAGTGCACTGGTTGCCGGTTCTTCCTGTTTTGTTTCTTCATTGTACTCAA
ATCACCAGTTATTTATCTTCATCTTTTACCATATCAGCTAGCTGACCTTTCATGTTTGTCAGAG
ACCATTATTCTTGAAAAGACAATTACTGATGGTCTTCCTACTTTGCAGTACAAATTTGCACCAG
ATCTTATCATGCTTGATGCATATGAAACGGTGGAGTCATGGATGACCACAAACAACCTAAATCC
AAGGAAACTGATTCCTGCAATGATGCGTTATTCAAGTGAACCTCATGCGAAGTAATCTGCAGCT
CTCTATTTGCATATTTTATCTGTTATATGTTTCTTTCACATCAATGATTTGAGTTCATGTGCCC
TTTTTTTCCCCTCCCTGGTTGTATCTCCTCAGTAAATATGTCTAGGTCCAAAGCTGTGACAGCT
GAGTTAAAAACTTTGTATGATACCATGCGGGTGCCACTACTGGATTTCCTTACCCCTTTGGCTT
TTCACTGAATTCATTTTGTTAGAGATTGCAGCTGTGCACATCTTGTTGATAGATACATTCAGTG
TTGGTCATTGTATAAATGTTAAAGTTATTAGGAAAAAATTGTAAATTTAGTTTTGTTTTGTTAC
TGACATTGCACAGATGTTGAATTAATATATTCCCTTTTCCTTTCTTGCAATTAGGTCTTGACAC
TGCTTTTTGTTTTAATTGTTATTGTTCCCATTTAATTAGGGAGGCATATCTATCTAGCAACATT
ATAATTTTGATATAATGGATGTATTTTTCTATTTGACACTCTGAAGTTATTTATTTATGCAAAT
CATTAAAATGCAGGAATGAAACCCATGAAGTCATCAAATATCTAGAATTCTGTGTTCATCGCTT
GCACAATGAGGATCCTGGAGTTCACAACTTGCTGCTTTCTCTGTATGCCAAGCAGGTTGAGATA
CTCACTGTAGTATTTTAAAATTATGTTTTGAAGCAACACTACCAAATTATATTTGTATTTGTGT
TTTGCATACTCCATCCCATAATATAACTGATTTTATTGTCGACCAATGTTAGGTGAATCTCATT
ATTACTATTATCGTCTGTTTACATCTTGAAATCCTTGTCTTGCCATAGAATACCATACATTTGT
TATTTATTCTGAACATTCTTGCCTTAATGTCTAACATTGTTGTTTTGTGTGCCCAAGATATAAT
GATGACATTTTATGGCCTGTTCCATTGCTTCTGTTCTGTGGTATATATAACTACTTGAACATAT
CTTTGATGAAACCATTTGGATTCTTTAATGAGGAACTCTCAAAGATATTTCAGTAATTTCCAAG
TATATTTGAAATTATGTCATGTGTGTGTGTTAATGTATTTATGATTTATGCATAGTGCAGCCAA
TGTGATAGTGTGGAAGTCATATTAGACACAATTCTAAGTCTTATTCTCTGTTTGTTTGTTAAGA
CATTTAACTTTTTAAATTTTCCTTCTCGTATTAAATTAGGAAGATGATAGTGCCCTTTTGCGCT
TCCTACAATGCAAATTTGGGAAAGGACGAGAAAATGGCCCTGAATTCTTCTATGATCCCAAGTA
CGCCTTGCGTCTTTGCCTCAAGGAAAAGCGAATGCGTGCCTGTGTTCATATATACGGCATGATG
TCTATGCATGAAGAAGCAGTTGCGCTTGCTTTACAGGTGATATGTTATCCTAATGCTTTCATGG
TTTCTTTTCATATTATGTCTATCCAAGTACTTCTGTTTGTTCATAGCTTTTTTATAATAGTCCT
TTCATATTATGTATCATTTTGCATAATCTAATGTAATCATTGCTGGAATTTTGTCTCAAAACCA
CACTGGCACTAGAGTTGTTCAAATCAATTACTTACAAATTAAGATGGATAAATCTAATTCTAGA
AATGCAGCACCTCTGCTGGTTGTATTATACATATATCACTATATCAGGGATTCAATCAATTTCT
CACTGCTGGGGATGGGAGATTAGGGGATGGACTGAGAAAAGCTTCACACAGGACTCTCACGGAA
AGTTTCTTGCGGTTTGTTTGGGTAGTTTTTATGGAGGCATGAAATATCTACGGTCAATGTTGTA
CTCTTTTTTTTTTTTCAAGAAGGGTCAATATTGTACACTAAAAGTTCTTTGATTTCAAATTCAC
AGGGATTGGGTCTGAGTGACTTCAATCATACCATATCAAATGTAAACCTCAAAACTTTGGATCT
TGTCTTATGTGGATCTCTTTTCATTATACTCTTGCTTGTTAAAGCTAAAGCTAGAGTGTGAGGA
GTGACGTTAGTTAGTGCTTATTTGGTTGGTATAGTCATTGAGTTGTCTTTCCATTTTTTTTTTT
TAACATTATGTATCTTGTACTAGTTCTTCAGTACTGCAATACAATAACAATGTAGACTTTTATC
CTTTTCTCTTTGCCTGTATAGCTCATTCTCTCTCTATCCGTTAACATTGCTGAAGTACATTATC
AAAGACATTCTAATTGCACTTCTCAAAGACATTCTAATTACACTTCTGCTTTTGGGTACTAGGT
TGACCCCGAGCTAGCTATGGCCGAAGCTGATAAGGTTGAAGATGATGAAGACTTGAGGAAAAAG
CTTTGGCTCATGGTTGCAAAGCATGTAATTGAACAGGAAAAGGGAACTAAAAGAGAGAATATTC
GGAAGGCAATTGCTTTTCTGAAGGAAACTGATGGACTTCTTAAGATTGAGGATATCTTACCATT
CTTTCCTGACTTTGCATTGATTGACGACTTCAAAGTTAGTCCTATCATTCTGGGTTTTGTTATA
GTGTTCAGTAAACTTATCCACTCTTTCCTTAGCTTACAACTGTATTGAATTGGTATATTTTTTT
CCAATCTTGGCATATAAAATATCTATTGTATGTATAAAGCATATTATTGTTTTTTTGGCATTCA
GAAAATTTTTGCTAGTTTGTATGGAAGACCACACTAACTCTGTTGTGGTAATTTATACGTACGC
TCATTCTTAAGTTTGTTCTTTCATCAAACTTGTGAATGTTAACTTTCTAATCTGTCTCCAGGAA
GCGATTTGCTCATCGCTGGATGATTATAACAAGCAAATTGAACAGCTTAAACAGGAGATGAATG
ATGCAACACATGGTGCTGACAACATCAGAAATGATATCAGTGCTCTTGCTCAAAGATATGCTGT
CATCGACCGCGACGAGGACTGTGGG
						
					

			
		

Sequences
Splice junction sequence	GGAGATGAATGATGCAACACATGGTGCTGACAACATCAGAAATGATATCAGTGCTCTTGCTCAA AGATATGCTGTCATCGACCGCGACGAGGACTGTGGGataaatcgattactcttggaagatgaca ctgctttggagaatcgaagttcagagtaccaatcaattatgagagagttccgtgctttcctgag tgattgca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATAAATCGATTACTCTTGGAAGATGACACTGCTTTGGAGAATCGAAGTTCAGAGTACCAATCAA TTATGAGAGAGTTCCGTGCTTTCCTGAGTGATTGCAAGGATGTATTGGATGAGGCAACTACAAT GAAACTTTTAGAAAGGTAATTAATTTGCAAGTATTGACAGTGTTCACAATCAGTTTTTCTCCTT TAGACCATTATGCATGTTATAGAAATTATGTCAAATTACCTGCCAAACATTTCCAATTCTTAGT AACTGCCTCTTCCTTCCTTGAGTTCTCGTGTAACAAGTAGGCCATTTTAGTTGCTTAATCAAAT ACATGGATTTTGGAAATTGTTATGCTTCTTAAGCATCTGGCAATTTGAAGTATATTTCAGTTTT TCTTGTTCGGTTTTGCAAGCATTGTAAGAATTGATGCACTGTGATGCCTAAAATCAAATATTTA TACCTATTTCTTGTACTTATGATTTCACCGTAATTTGCTTTTGCAAAATCAAAAGTAGCCTAAA CACTCTTTCAATTATTATTATTGTAATTTTTTCCTTTTTTTTTATGGTACAATATTCTGCAGCT ATGGTAGAGTTGAAGAACTGGTATTTTTTGCTAGTTTGAAGGAGCAGCACGAGATCGTAGTTCA TCATTATATCCAGGTACTTTTATTTCCATTTTGAAATATTTACTTGTGGGATACTGTTCTATTC ATTACCCATTCTTCTCCTCATGGATATTTACCAGTTGAGTTTTTCCTTTTCTAACTATTTTCAG TATTTGGACTTATTTTATTTACTTTTGCCCCATAAAGTTATCTGGAAATTGTTTTTTTTTTCCT TTTAGCTGGTGCCAAAAATCCAATTTTTTTTTTTTTTCCCCTTTGAGGTTTGTCCTTGGGTAAG CTTTCCCTGTTGTGTAATCTTTCCCTTTGGTTGATAGTGGATATTGTTAACAAGAGAGAGGAGC TAATTTGGTATGGAATTAATTTATATGGTTAACATTGCAGATTCAGATGATCCATTACTGTTTT ATTTAAAGTTTTGCAACAAGATTATTCTTGAATTTGACTTGAAGTTATCTATCCATTTATTTGC TTATGTATTTTGTTTCATTCAGCAAGGAGAAGCCAAAAAAGCATTGCAAATGCTTCGAAAACCT GCTGTCCCAATAGATCTTCAGGTACAGATCAAATTCCGGATTTGGAACATCGAACCTTTAGGAC TTTACCCATCACTTCAGTGCACTGGTTGCCGGTTCTTCCTGTTTTGTTTCTTCATTGTACTCAA ATCACCAGTTATTTATCTTCATCTTTTACCATATCAGCTAGCTGACCTTTCATGTTTGTCAGAG ACCATTATTCTTGAAAAGACAATTACTGATGGTCTTCCTACTTTGCAGTACAAATTTGCACCAG ATCTTATCATGCTTGATGCATATGAAACGGTGGAGTCATGGATGACCACAAACAACCTAAATCC AAGGAAACTGATTCCTGCAATGATGCGTTATTCAAGTGAACCTCATGCGAAGTAATCTGCAGCT CTCTATTTGCATATTTTATCTGTTATATGTTTCTTTCACATCAATGATTTGAGTTCATGTGCCC TTTTTTTCCCCTCCCTGGTTGTATCTCCTCAGTAAATATGTCTAGGTCCAAAGCTGTGACAGCT GAGTTAAAAACTTTGTATGATACCATGCGGGTGCCACTACTGGATTTCCTTACCCCTTTGGCTT TTCACTGAATTCATTTTGTTAGAGATTGCAGCTGTGCACATCTTGTTGATAGATACATTCAGTG TTGGTCATTGTATAAATGTTAAAGTTATTAGGAAAAAATTGTAAATTTAGTTTTGTTTTGTTAC TGACATTGCACAGATGTTGAATTAATATATTCCCTTTTCCTTTCTTGCAATTAGGTCTTGACAC TGCTTTTTGTTTTAATTGTTATTGTTCCCATTTAATTAGGGAGGCATATCTATCTAGCAACATT ATAATTTTGATATAATGGATGTATTTTTCTATTTGACACTCTGAAGTTATTTATTTATGCAAAT CATTAAAATGCAGGAATGAAACCCATGAAGTCATCAAATATCTAGAATTCTGTGTTCATCGCTT GCACAATGAGGATCCTGGAGTTCACAACTTGCTGCTTTCTCTGTATGCCAAGCAGGTTGAGATA CTCACTGTAGTATTTTAAAATTATGTTTTGAAGCAACACTACCAAATTATATTTGTATTTGTGT TTTGCATACTCCATCCCATAATATAACTGATTTTATTGTCGACCAATGTTAGGTGAATCTCATT ATTACTATTATCGTCTGTTTACATCTTGAAATCCTTGTCTTGCCATAGAATACCATACATTTGT TATTTATTCTGAACATTCTTGCCTTAATGTCTAACATTGTTGTTTTGTGTGCCCAAGATATAAT GATGACATTTTATGGCCTGTTCCATTGCTTCTGTTCTGTGGTATATATAACTACTTGAACATAT CTTTGATGAAACCATTTGGATTCTTTAATGAGGAACTCTCAAAGATATTTCAGTAATTTCCAAG TATATTTGAAATTATGTCATGTGTGTGTGTTAATGTATTTATGATTTATGCATAGTGCAGCCAA TGTGATAGTGTGGAAGTCATATTAGACACAATTCTAAGTCTTATTCTCTGTTTGTTTGTTAAGA CATTTAACTTTTTAAATTTTCCTTCTCGTATTAAATTAGGAAGATGATAGTGCCCTTTTGCGCT TCCTACAATGCAAATTTGGGAAAGGACGAGAAAATGGCCCTGAATTCTTCTATGATCCCAAGTA CGCCTTGCGTCTTTGCCTCAAGGAAAAGCGAATGCGTGCCTGTGTTCATATATACGGCATGATG TCTATGCATGAAGAAGCAGTTGCGCTTGCTTTACAGGTGATATGTTATCCTAATGCTTTCATGG TTTCTTTTCATATTATGTCTATCCAAGTACTTCTGTTTGTTCATAGCTTTTTTATAATAGTCCT TTCATATTATGTATCATTTTGCATAATCTAATGTAATCATTGCTGGAATTTTGTCTCAAAACCA CACTGGCACTAGAGTTGTTCAAATCAATTACTTACAAATTAAGATGGATAAATCTAATTCTAGA AATGCAGCACCTCTGCTGGTTGTATTATACATATATCACTATATCAGGGATTCAATCAATTTCT CACTGCTGGGGATGGGAGATTAGGGGATGGACTGAGAAAAGCTTCACACAGGACTCTCACGGAA AGTTTCTTGCGGTTTGTTTGGGTAGTTTTTATGGAGGCATGAAATATCTACGGTCAATGTTGTA CTCTTTTTTTTTTTTCAAGAAGGGTCAATATTGTACACTAAAAGTTCTTTGATTTCAAATTCAC AGGGATTGGGTCTGAGTGACTTCAATCATACCATATCAAATGTAAACCTCAAAACTTTGGATCT TGTCTTATGTGGATCTCTTTTCATTATACTCTTGCTTGTTAAAGCTAAAGCTAGAGTGTGAGGA GTGACGTTAGTTAGTGCTTATTTGGTTGGTATAGTCATTGAGTTGTCTTTCCATTTTTTTTTTT TAACATTATGTATCTTGTACTAGTTCTTCAGTACTGCAATACAATAACAATGTAGACTTTTATC CTTTTCTCTTTGCCTGTATAGCTCATTCTCTCTCTATCCGTTAACATTGCTGAAGTACATTATC AAAGACATTCTAATTGCACTTCTCAAAGACATTCTAATTACACTTCTGCTTTTGGGTACTAGGT TGACCCCGAGCTAGCTATGGCCGAAGCTGATAAGGTTGAAGATGATGAAGACTTGAGGAAAAAG CTTTGGCTCATGGTTGCAAAGCATGTAATTGAACAGGAAAAGGGAACTAAAAGAGAGAATATTC GGAAGGCAATTGCTTTTCTGAAGGAAACTGATGGACTTCTTAAGATTGAGGATATCTTACCATT CTTTCCTGACTTTGCATTGATTGACGACTTCAAAGTTAGTCCTATCATTCTGGGTTTTGTTATA GTGTTCAGTAAACTTATCCACTCTTTCCTTAGCTTACAACTGTATTGAATTGGTATATTTTTTT CCAATCTTGGCATATAAAATATCTATTGTATGTATAAAGCATATTATTGTTTTTTTGGCATTCA GAAAATTTTTGCTAGTTTGTATGGAAGACCACACTAACTCTGTTGTGGTAATTTATACGTACGC TCATTCTTAAGTTTGTTCTTTCATCAAACTTGTGAATGTTAACTTTCTAATCTGTCTCCAGGAA GCGATTTGCTCATCGCTGGATGATTATAACAAGCAAATTGAACAGCTTAAACAGGAGATGAATG ATGCAACACATGGTGCTGACAACATCAGAAATGATATCAGTGCTCTTGCTCAAAGATATGCTGT CATCGACCGCGACGAGGACTGTGGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							19906597-19910968(+)
19910880-19906531(+)
						
					

						Potential amino acid sequence
						
							MREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLR
KPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLE
FCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKR
MRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRE
NIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGAD
NIRNDISALAQRYAVIDRDEDCGINRLLLEDDTALENRSSEYQSIMREFRAFLSDCKDVLDEAT
TMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIML
DAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLS
LYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVA
LALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIE
DILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRD
EDCGINRLLLEDDTALENRSSEYQSIMREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFAS
LKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRK
LIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKF
GKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVED
DEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAI
CSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDCGINRLLLEDDTALENR
SSEYQSIMREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAK
KALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETH
EVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALR
LCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQ
EKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMN
DATHGADNIRNDISALAQRYAVIDRDEDCG(+)
MMQHMVLTTSEMISVLLLKDMLSSTATRTVG*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						playing an important role in the early flowering process
					

			
		

Functional Information
Coding potential	Y
Potential coding position	19906597-19910968(+) 19910880-19906531(+)
Potential amino acid sequence	MREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLR KPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLE FCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKR MRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRE NIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGAD NIRNDISALAQRYAVIDRDEDCGINRLLLEDDTALENRSSEYQSIMREFRAFLSDCKDVLDEAT TMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIML DAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLS LYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVA LALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIE DILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRD EDCGINRLLLEDDTALENRSSEYQSIMREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFAS LKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRK LIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKF GKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVED DEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAI CSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDCGINRLLLEDDTALENR SSEYQSIMREFRAFLSDCKDVLDEATTMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAK KALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNETH EVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALR LCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQ EKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMN DATHGADNIRNDISALAQRYAVIDRDEDCG(+) MMQHMVLTTSEMISVLLLKDMLSSTATRTVG*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	playing an important role in the early flowering process

			
						 Other Information
					
						References
						Zeng et al., 2018

circRNA

Detail information of LOC18050829_circ_g.1

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