Plant Circular RNA Database

Detail information of Solyc07g044850.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc07g044850.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_002344
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr7: 57909763-57914672  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc07g044850.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc07g044850.2_circ_igg.1 Solyc07g044850.2_circ_g.1 						
					
						Support reads
						7
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc07g044850.2.1:2

General Information
CircRNA Name	Solyc07g044850.2_circ_g.2
ID in PlantcircBase	sly_circ_002344
Alias	NA
Organism	Solanum lycopersicum
Position	chr7: 57909763-57914672 JBrowse»
Reference genome	SL2.50.38
Type	ue-circRNA
Identification method	CIRI
Parent gene	Solyc07g044850.2
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Solyc07g044850.2_circ_igg.1 Solyc07g044850.2_circ_g.1
Support reads	7
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc07g044850.2.1:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTACATGAACATAAAGATGAAGTCTGGTTCTTGCAGTTTTCCCATAATGGAAAGTACTTAGCC
TCGTCATCTGCCGATTTTGCCGTAATTATATGGGAGgatttaggcctactattccaacttttca
gttttgtcttcctcctgctgttatatatgggctgacgcgtttgtttcatgggagctgaggacga
tgatgaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 975
Transcript exons: 57909763-57910635,57914571-57914672
GATTTAGGCCTACTATTCCAACTTTTCAGTTTTGTCTTCCTCCTGCTGTTATATATGGGCTGAC
GCGTTTGTTTCATGGGAGCTGAGGACGATGATGAACCACCATCAAAACGTGTGAAGGTATCCTC
CAGTCAATTGGTAGATATTTCTGACAGGACATTTGTTAGAGATCCTGTAAGTTGTTCATTGGGT
GACTCGATGGCTCGACCCCTGACTCTTCAAGGGGACGATGAGGTTGTTGGTACAAAAGGAGTTG
TCAAGAAAGTTGAATTTGTTCGGATTATAACTGAGGCATTAGATTCTCTTGGTTACAAAAAGAC
TCGGGCCTTACTAGAGGAAGAGTCAGGGATACCCTTGCACACTTCCGTCGTAAATTTGTTTATG
CAGCAAATTCTTGATGGTAAATGGGATGAAAGTTTAAACACATTGCGAAATATTGGTCTGGTGG
ATGAAAAAATTGTAAAGTTGGCATCTTTTGTGATATTGGAGCAGAAGTTTTTTGAATTGTTGCA
CAAGGAAAAAGTTATGGATGCTCTGAGGACACTGAGGGGCGAGATCTCACCTCTTTGCATAAAC
AATGATAGAGTCCATCAGCTTTCGTTTTTCATTATATCACCTTCTCAGCAGGTTCTTACTGGGG
TATCAGGTCAAGGCACAGCGAGAGTAAAGTCACGTACAGAGCTACTAGAGGAATTGCAAAGATT
GCTTCCCCCAACAGTTATGGTTCCAGAAAAGAGATTGGTACATCTTGTTGAACAAGCTCTTGAC
TTGCAACTAGATGCTTGTAGATTTCACAACTCTGTGGTTGGTGAAATGTCACTGCTCAGTGATC
ATCACTGCGGAAGAGATCATATTCCATCTCTAACAATGCAGATATTACATGAACATAAAGATGA
AGTCTGGTTCTTGCAGTTTTCCCATAATGGAAAGTACTTAGCCTCGTCATCTGCCGATTTTGCC
GTAATTATATGGGAG
						
					

						Genomic sequence
						
							GATTTAGGCCTACTATTCCAACTTTTCAGTTTTGTCTTCCTCCTGCTGTTATATATGGGCTGAC
GCGTTTGTTTCATGGGAGCTGAGGACGATGATGAACCACCATCAAAACGTGTGAAGGTATCCTC
CAGTCAATTGGTAGATATTTCTGACAGGACATTTGTTAGAGATCCTGTAAGTTGTTCATTGGGT
GACTCGATGGCTCGACCCCTGACTCTTCAAGGGGACGATGAGGTTGTTGGTACAAAAGGAGTTG
TCAAGAAAGTTGAATTTGTTCGGATTATAACTGAGGCATTAGATTCTCTTGGTTACAAAAAGAC
TCGGGCCTTACTAGAGGAAGAGTCAGGGATACCCTTGCACACTTCCGTCGTAAATTTGTTTATG
CAGCAAATTCTTGATGGTAAATGGGATGAAAGTTTAAACACATTGCGAAATATTGGTCTGGTGG
ATGAAAAAATTGTAAAGTTGGCATCTTTTGTGATATTGGAGCAGAAGTTTTTTGAATTGTTGCA
CAAGGAAAAAGTTATGGATGCTCTGAGGACACTGAGGGGCGAGATCTCACCTCTTTGCATAAAC
AATGATAGAGTCCATCAGCTTTCGTTTTTCATTATATCACCTTCTCAGCAGGTTCTTACTGGGG
TATCAGGTCAAGGCACAGCGAGAGTAAAGTCACGTACAGAGCTACTAGAGGAATTGCAAAGATT
GCTTCCCCCAACAGTTATGGTTCCAGAAAAGAGATTGGTACATCTTGTTGAACAAGCTCTTGAC
TTGCAACTAGATGCTTGTAGATTTCACAACTCTGTGGTTGGTGAAATGTCACTGCTCAGTGATC
ATCACTGCGGAAGAGATCATATTCCATCTCTAACAATGCAGGTTAATTCACATTAATAATTGGG
TGTGCTTTTGATATACAAGCCTTTTGATTCTGCTCTTGATTGTTCGAGTCTGACATGTTCAAGA
GAAACTTCATTTTGTGTCTCACACAACAGACACAGGTTGTGTGAGGCTTTGATCTACAAATTAC
TGGACCCTAGTCTTACACTTTTGGTCCACAAATTTGTGAAACAAAAAGAATCCCCACACAACTT
GTGTCAGTTGTGTGAGACACAAAGTAAACTCTTTCCATGTTTCGTCTTGCAATCATGCACTAGT
TTGTCCTATCATTATCCGAGTCAATAATTAGTGGAGTTGAATGAATATGATGGGAAATATTGAT
CAAGTTTTGTTCCTTTGCATTCTAAACAAATGTCATTGTTGTTAAAAGAGTCACCTCTTCTATT
TTATGTCAATTATTTGAATGACATATGTTGGCATTAGGATGAAAAGCATTCTGAATTCATGCTT
TGTTTCATTCAACTCTTTGTGGTTGAAGGTTTTGCCAATTTTTGCTTATGTTCTTTTGAAAGGC
TTGTTTTGATTTGCACCCAAGGGTGTGACCTAGTGGTCATTGACTGGAGACAAAAAACACTAAG
TTCCCATCTGTCCTAGACAAAAAACAAAGCATGAAATCATTTTCTTTGTTATGTATTTGTCATT
CATGCTTATATTTATTAGTCTTGGATTGATATTTGTACTTTTTCTCCCTTCGTGCCCTTTTTCA
TTAAAGCCCACACTTCTTTTTGACAAAGGTAACAAATTTGTATATAGTTTTTCAGCACTAAAGA
CTGGGATCCCAAATTTAGACCGTGGAGCTACATACAGTTGATAGACTCAAAAAATCTTTAAAAA
CACTAGATTCTACTTCATCTTACAAAGAACCTAGAATACTGGAATAGTTACATGATCATTTACA
TACTCAGACTACACCAATAGCAAAAAGTGACAAGACAGCTCATTTTTATCCTATGTAAAGGCCC
ACTAATGCTCTCAAATTTCTCTCCTTCCATATGGTCCACCAAATCACTGTTGGGACAATTCTCC
ATCAGCTTTTGTCTGCACCGCCACTACCTTTATTGTTCCAACTTTCTATAGCCCGTCTTGCCCT
TTATGGTATGGTCCTACTTATGCCCCTAAAGCTGGTAAATAGGTTCCAAAGTTGTCTAACCACC
CTGCAGTGAAGAAACAAATGGTTGATTGTCTCTACCTGCTTCTCACAGAAACTGTCTTGGAGAC
ATATGTATTCCCCTCTTCTTGTGATTCTCCTGAGTTAGTTTTGTCTCTTTTACTACCAACCAAG
TAAAGATTGCCTCCCTATATGGAATTTTGACTTTCTAGATAAGCTTCCAAGGCAAAAATTTGAG
TTGAGTCCCTATCTGGTTCAGATTCTTGTAGGCAGAGCTAACTGTGAAAATACCTTTGCTATGA
TACATGAGTGTCTTCTCCCTCTTGCAATCCTCCAAATTGGTCTAGGGTGCCACAAAATTTAGCT
AATCTATCCATATCCCAGTCTTGCATCATCGTTCTCTATGTTAAGTTCCATCCATGGATGGATC
AAACTCCTTCAAAATGGCCTGTTGTTGCTGATTCAACAGATAAATATCTGAAAAAGTAAGAACT
GCTTGAGGCTGCCATTTCCTAACCAGCTAATCCTAAACAAAATCTTCCTTCCATTGTTTATACT
GGTCTCTGGGAACGTATATTGCACATTTGTCCCTTATTATTATTATTAATATTGTTAAAGCAGA
AAGCTAATCAGTACACATTAACCCATGTACAAAATAATTCATAAAATATATACGAGTCAGACAT
CAGCAAATAATGAAGATACACAAAAATAGTATAAAAAAAGGAAGAAGATTAAGATAAGGTAAAA
AGTTAACCTATGATATTGCTGATTGTAGTATGGCAAGTGGAAAAAAATAAAGAAAGTGAAATGT
GATACAAAGGAAACAAATTGATATGTGCACGTACTGAGGAATATAAAAAGACAGCAACAATATC
TTTACCAATGTAGAAGAGGAAAGAACAAAAGATGAAACGAACTTCTATTTCATATACATAACTT
CCATGTCTTTCATATTCATAACCTTCAAATATTTAATGTGTAATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATGATGATGGTGATGATGATGATGATGATT
GTATATAGTTCTTTCAATGAAACTTTGCCACAAAATTCTGATTGATCTCCACAGGTTCATACCA
TAGGGAGAAATTACTTCCTTAGTTGTCTAGTACTCTAATTTTCTCATACTTGGTCTGAATTACT
CTTTAACCCATTTAGCCTGCTCCTCTTTAGGAGATCTCCACAACCACTTCATTATTAAGCTTTT
GTTCTATTTCCTCAAGTTTATAATGCCTAACCCATCTAGTTTCTTTGAAAGAACTACAGTCTTC
CATTTGACCTAATGAAATCCTTTGTTCTCCTTCTTACCATTCCACAAAAACTCCTCCTTAAAGC
ATCAATTCTTTCTTCTACCCTAGTTGGGAGAGGAAAAAATGACATCTAGTACGTCGGTAGAACA
TCTAAGACTGAGTTGATCAGGAACAATCTTCCACCTCAGACAGATACTATGCTTTCCATCTGGA
TAGTCTTCTTTCACATCTCTTCACCACCCCATTCAAAATCTCTCTGGATTTGCTTTTGGCTCCC
AAAGGCATCCCCAAATAAATTGTTGGTAGTTGACCTATTTCTCCTCCCAAGATCTCTGGCAGAT
TTACATTCTGTTCACATCATTAATTGGAAAAATATGACCTCCGATTGATATGGAGCCCAATAGT
TGCTCTGATTAATCTCCTGGACACACCCAAACAATTCTTACCATTATGCTCCCTCTCAAAAAGA
ATTTTTTATTAATAATGCAACAAGCTAGTGTCTTCATGGCTCCACAGAAAAAGAAACTATGCAA
ATTGCTTCAATGTATCTATATGTCACAAGTACATATATAAACTCTCTAGAAGAATAGAATCTTA
TGTAATATTTTGTTCAGCAAAAAACAAATGAAGAACAGAGATTTGACTCTCCAGCTTTAATGCC
GTGGATCTTCAAAGTGCCAGCTCCTTTTGAGTAGTTATTGACAGCGGAACTCTAACTAAAAGCA
TATTTATTGCAGCCTCGGTCCATGAGCAAATTAATATGGGGAATGCATGCTGTCCTATCATAAG
CTTGCTAATGAATGCAGTTTTTATTTACTAATTTGAAAAAAATGAATGCACTTTTATTTTTATG
TCCTAGAAAGATGCTGGAGTTAATAGGTAAGCACTATTGATTTCTGGGGAGCTTTGTGATCTTC
AGGTCCTTAGTGAGCTTGTGTCCACCATTTCATGTGGCTTTAGTCACAACAATATGAAATGTTT
CATGGATTGTTGCCAAACTTTTGAATCAATGAAAGTCAGTACCTGTAGGCACAACATCACATTT
TTCGTCTCTTGTGAAATTGGTCTCCCTTTCTCTTGTCATTATATCTTTTTTGTGTAAACAAGTA
TGTTCTTTTTTTCCTCTAAATTTTGGCTTTGTTTGGGACTGGGGTGTAACTTTTGTTTTGTTCA
TGTTGTTTATGCCATTTCAAATTGATCTTATATTTGGGAGGTTTAAAGTTTACCAGGAGATGTG
GTTGGATCCACTGTGGTTTAAGTGAAAGCAGAAGAAATTGCCTTGGGGTGGGGTGGAGGGGTTA
GTTAAAGTGCCAAGGAGTTGTAAATGTGCTTTGATAAAATTGAACTTCACTGGCTTTCTGCTTG
TTATCATTTACCGACGAGCTGTTATTTTATAAGTCGTTTTAGAGCAATCTTTGACAGTGGAGTC
TGATTTCTTGCAGATACAATATGTTAATCACCTTAAACGCTAATTGTTTCTTCATTGCTTCTAC
TGCACCAGATATTACATGAACATAAAGATGAAGTCTGGTTCTTGCAGTTTTCCCATAATGGAAA
GTACTTAGCCTCGTCATCTGCCGATTTTGCCGTAATTATATGGGAG
						
					

			
		

Sequences
Splice junction sequence	ATTACATGAACATAAAGATGAAGTCTGGTTCTTGCAGTTTTCCCATAATGGAAAGTACTTAGCC TCGTCATCTGCCGATTTTGCCGTAATTATATGGGAGgatttaggcctactattccaacttttca gttttgtcttcctcctgctgttatatatgggctgacgcgtttgtttcatgggagctgaggacga tgatgaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 975 Transcript exons: 57909763-57910635,57914571-57914672 GATTTAGGCCTACTATTCCAACTTTTCAGTTTTGTCTTCCTCCTGCTGTTATATATGGGCTGAC GCGTTTGTTTCATGGGAGCTGAGGACGATGATGAACCACCATCAAAACGTGTGAAGGTATCCTC CAGTCAATTGGTAGATATTTCTGACAGGACATTTGTTAGAGATCCTGTAAGTTGTTCATTGGGT GACTCGATGGCTCGACCCCTGACTCTTCAAGGGGACGATGAGGTTGTTGGTACAAAAGGAGTTG TCAAGAAAGTTGAATTTGTTCGGATTATAACTGAGGCATTAGATTCTCTTGGTTACAAAAAGAC TCGGGCCTTACTAGAGGAAGAGTCAGGGATACCCTTGCACACTTCCGTCGTAAATTTGTTTATG CAGCAAATTCTTGATGGTAAATGGGATGAAAGTTTAAACACATTGCGAAATATTGGTCTGGTGG ATGAAAAAATTGTAAAGTTGGCATCTTTTGTGATATTGGAGCAGAAGTTTTTTGAATTGTTGCA CAAGGAAAAAGTTATGGATGCTCTGAGGACACTGAGGGGCGAGATCTCACCTCTTTGCATAAAC AATGATAGAGTCCATCAGCTTTCGTTTTTCATTATATCACCTTCTCAGCAGGTTCTTACTGGGG TATCAGGTCAAGGCACAGCGAGAGTAAAGTCACGTACAGAGCTACTAGAGGAATTGCAAAGATT GCTTCCCCCAACAGTTATGGTTCCAGAAAAGAGATTGGTACATCTTGTTGAACAAGCTCTTGAC TTGCAACTAGATGCTTGTAGATTTCACAACTCTGTGGTTGGTGAAATGTCACTGCTCAGTGATC ATCACTGCGGAAGAGATCATATTCCATCTCTAACAATGCAGATATTACATGAACATAAAGATGA AGTCTGGTTCTTGCAGTTTTCCCATAATGGAAAGTACTTAGCCTCGTCATCTGCCGATTTTGCC GTAATTATATGGGAG
Genomic sequence	GATTTAGGCCTACTATTCCAACTTTTCAGTTTTGTCTTCCTCCTGCTGTTATATATGGGCTGAC GCGTTTGTTTCATGGGAGCTGAGGACGATGATGAACCACCATCAAAACGTGTGAAGGTATCCTC CAGTCAATTGGTAGATATTTCTGACAGGACATTTGTTAGAGATCCTGTAAGTTGTTCATTGGGT GACTCGATGGCTCGACCCCTGACTCTTCAAGGGGACGATGAGGTTGTTGGTACAAAAGGAGTTG TCAAGAAAGTTGAATTTGTTCGGATTATAACTGAGGCATTAGATTCTCTTGGTTACAAAAAGAC TCGGGCCTTACTAGAGGAAGAGTCAGGGATACCCTTGCACACTTCCGTCGTAAATTTGTTTATG CAGCAAATTCTTGATGGTAAATGGGATGAAAGTTTAAACACATTGCGAAATATTGGTCTGGTGG ATGAAAAAATTGTAAAGTTGGCATCTTTTGTGATATTGGAGCAGAAGTTTTTTGAATTGTTGCA CAAGGAAAAAGTTATGGATGCTCTGAGGACACTGAGGGGCGAGATCTCACCTCTTTGCATAAAC AATGATAGAGTCCATCAGCTTTCGTTTTTCATTATATCACCTTCTCAGCAGGTTCTTACTGGGG TATCAGGTCAAGGCACAGCGAGAGTAAAGTCACGTACAGAGCTACTAGAGGAATTGCAAAGATT GCTTCCCCCAACAGTTATGGTTCCAGAAAAGAGATTGGTACATCTTGTTGAACAAGCTCTTGAC TTGCAACTAGATGCTTGTAGATTTCACAACTCTGTGGTTGGTGAAATGTCACTGCTCAGTGATC ATCACTGCGGAAGAGATCATATTCCATCTCTAACAATGCAGGTTAATTCACATTAATAATTGGG TGTGCTTTTGATATACAAGCCTTTTGATTCTGCTCTTGATTGTTCGAGTCTGACATGTTCAAGA GAAACTTCATTTTGTGTCTCACACAACAGACACAGGTTGTGTGAGGCTTTGATCTACAAATTAC TGGACCCTAGTCTTACACTTTTGGTCCACAAATTTGTGAAACAAAAAGAATCCCCACACAACTT GTGTCAGTTGTGTGAGACACAAAGTAAACTCTTTCCATGTTTCGTCTTGCAATCATGCACTAGT TTGTCCTATCATTATCCGAGTCAATAATTAGTGGAGTTGAATGAATATGATGGGAAATATTGAT CAAGTTTTGTTCCTTTGCATTCTAAACAAATGTCATTGTTGTTAAAAGAGTCACCTCTTCTATT TTATGTCAATTATTTGAATGACATATGTTGGCATTAGGATGAAAAGCATTCTGAATTCATGCTT TGTTTCATTCAACTCTTTGTGGTTGAAGGTTTTGCCAATTTTTGCTTATGTTCTTTTGAAAGGC TTGTTTTGATTTGCACCCAAGGGTGTGACCTAGTGGTCATTGACTGGAGACAAAAAACACTAAG TTCCCATCTGTCCTAGACAAAAAACAAAGCATGAAATCATTTTCTTTGTTATGTATTTGTCATT CATGCTTATATTTATTAGTCTTGGATTGATATTTGTACTTTTTCTCCCTTCGTGCCCTTTTTCA TTAAAGCCCACACTTCTTTTTGACAAAGGTAACAAATTTGTATATAGTTTTTCAGCACTAAAGA CTGGGATCCCAAATTTAGACCGTGGAGCTACATACAGTTGATAGACTCAAAAAATCTTTAAAAA CACTAGATTCTACTTCATCTTACAAAGAACCTAGAATACTGGAATAGTTACATGATCATTTACA TACTCAGACTACACCAATAGCAAAAAGTGACAAGACAGCTCATTTTTATCCTATGTAAAGGCCC ACTAATGCTCTCAAATTTCTCTCCTTCCATATGGTCCACCAAATCACTGTTGGGACAATTCTCC ATCAGCTTTTGTCTGCACCGCCACTACCTTTATTGTTCCAACTTTCTATAGCCCGTCTTGCCCT TTATGGTATGGTCCTACTTATGCCCCTAAAGCTGGTAAATAGGTTCCAAAGTTGTCTAACCACC CTGCAGTGAAGAAACAAATGGTTGATTGTCTCTACCTGCTTCTCACAGAAACTGTCTTGGAGAC ATATGTATTCCCCTCTTCTTGTGATTCTCCTGAGTTAGTTTTGTCTCTTTTACTACCAACCAAG TAAAGATTGCCTCCCTATATGGAATTTTGACTTTCTAGATAAGCTTCCAAGGCAAAAATTTGAG TTGAGTCCCTATCTGGTTCAGATTCTTGTAGGCAGAGCTAACTGTGAAAATACCTTTGCTATGA TACATGAGTGTCTTCTCCCTCTTGCAATCCTCCAAATTGGTCTAGGGTGCCACAAAATTTAGCT AATCTATCCATATCCCAGTCTTGCATCATCGTTCTCTATGTTAAGTTCCATCCATGGATGGATC AAACTCCTTCAAAATGGCCTGTTGTTGCTGATTCAACAGATAAATATCTGAAAAAGTAAGAACT GCTTGAGGCTGCCATTTCCTAACCAGCTAATCCTAAACAAAATCTTCCTTCCATTGTTTATACT GGTCTCTGGGAACGTATATTGCACATTTGTCCCTTATTATTATTATTAATATTGTTAAAGCAGA AAGCTAATCAGTACACATTAACCCATGTACAAAATAATTCATAAAATATATACGAGTCAGACAT CAGCAAATAATGAAGATACACAAAAATAGTATAAAAAAAGGAAGAAGATTAAGATAAGGTAAAA AGTTAACCTATGATATTGCTGATTGTAGTATGGCAAGTGGAAAAAAATAAAGAAAGTGAAATGT GATACAAAGGAAACAAATTGATATGTGCACGTACTGAGGAATATAAAAAGACAGCAACAATATC TTTACCAATGTAGAAGAGGAAAGAACAAAAGATGAAACGAACTTCTATTTCATATACATAACTT CCATGTCTTTCATATTCATAACCTTCAAATATTTAATGTGTAATATATATATATATATATATAT ATATATATATATATATATATATATATATATATATATGATGATGGTGATGATGATGATGATGATT GTATATAGTTCTTTCAATGAAACTTTGCCACAAAATTCTGATTGATCTCCACAGGTTCATACCA TAGGGAGAAATTACTTCCTTAGTTGTCTAGTACTCTAATTTTCTCATACTTGGTCTGAATTACT CTTTAACCCATTTAGCCTGCTCCTCTTTAGGAGATCTCCACAACCACTTCATTATTAAGCTTTT GTTCTATTTCCTCAAGTTTATAATGCCTAACCCATCTAGTTTCTTTGAAAGAACTACAGTCTTC CATTTGACCTAATGAAATCCTTTGTTCTCCTTCTTACCATTCCACAAAAACTCCTCCTTAAAGC ATCAATTCTTTCTTCTACCCTAGTTGGGAGAGGAAAAAATGACATCTAGTACGTCGGTAGAACA TCTAAGACTGAGTTGATCAGGAACAATCTTCCACCTCAGACAGATACTATGCTTTCCATCTGGA TAGTCTTCTTTCACATCTCTTCACCACCCCATTCAAAATCTCTCTGGATTTGCTTTTGGCTCCC AAAGGCATCCCCAAATAAATTGTTGGTAGTTGACCTATTTCTCCTCCCAAGATCTCTGGCAGAT TTACATTCTGTTCACATCATTAATTGGAAAAATATGACCTCCGATTGATATGGAGCCCAATAGT TGCTCTGATTAATCTCCTGGACACACCCAAACAATTCTTACCATTATGCTCCCTCTCAAAAAGA ATTTTTTATTAATAATGCAACAAGCTAGTGTCTTCATGGCTCCACAGAAAAAGAAACTATGCAA ATTGCTTCAATGTATCTATATGTCACAAGTACATATATAAACTCTCTAGAAGAATAGAATCTTA TGTAATATTTTGTTCAGCAAAAAACAAATGAAGAACAGAGATTTGACTCTCCAGCTTTAATGCC GTGGATCTTCAAAGTGCCAGCTCCTTTTGAGTAGTTATTGACAGCGGAACTCTAACTAAAAGCA TATTTATTGCAGCCTCGGTCCATGAGCAAATTAATATGGGGAATGCATGCTGTCCTATCATAAG CTTGCTAATGAATGCAGTTTTTATTTACTAATTTGAAAAAAATGAATGCACTTTTATTTTTATG TCCTAGAAAGATGCTGGAGTTAATAGGTAAGCACTATTGATTTCTGGGGAGCTTTGTGATCTTC AGGTCCTTAGTGAGCTTGTGTCCACCATTTCATGTGGCTTTAGTCACAACAATATGAAATGTTT CATGGATTGTTGCCAAACTTTTGAATCAATGAAAGTCAGTACCTGTAGGCACAACATCACATTT TTCGTCTCTTGTGAAATTGGTCTCCCTTTCTCTTGTCATTATATCTTTTTTGTGTAAACAAGTA TGTTCTTTTTTTCCTCTAAATTTTGGCTTTGTTTGGGACTGGGGTGTAACTTTTGTTTTGTTCA TGTTGTTTATGCCATTTCAAATTGATCTTATATTTGGGAGGTTTAAAGTTTACCAGGAGATGTG GTTGGATCCACTGTGGTTTAAGTGAAAGCAGAAGAAATTGCCTTGGGGTGGGGTGGAGGGGTTA GTTAAAGTGCCAAGGAGTTGTAAATGTGCTTTGATAAAATTGAACTTCACTGGCTTTCTGCTTG TTATCATTTACCGACGAGCTGTTATTTTATAAGTCGTTTTAGAGCAATCTTTGACAGTGGAGTC TGATTTCTTGCAGATACAATATGTTAATCACCTTAAACGCTAATTGTTTCTTCATTGCTTCTAC TGCACCAGATATTACATGAACATAAAGATGAAGTCTGGTTCTTGCAGTTTTCCCATAATGGAAA GTACTTAGCCTCGTCATCTGCCGATTTTGCCGTAATTATATGGGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.498538317

Conservation Information
Conserved circRNAs	NA
PMCS	0.498538317

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							57909839-57909822(+)
57914667-57909845(+)
57909841-57910613(-)
						
						Potential amino acid sequence
						
							MGAEDDDEPPSKRVKVSSSQLVDISDRTFVRDPVSCSLGDSMARPLTLQGDDEVVGTKGVVKKV
EFVRIITEALDSLGYKKTRALLEEESGIPLHTSVVNLFMQQILDGKWDESLNTLRNIGLVDEKI
VKLASFVILEQKFFELLHKEKVMDALRTLRGEISPLCINNDRVHQLSFFIISPSQQVLTGVSGQ
GTARVKSRTELLEELQRLLPPTVMVPEKRLVHLVEQALDLQLDACRFHNSVVGEMSLLSDHHCG
RDHIPSLTMQILHEHKDEVWFLQFSHNGKYLASSSADFAVIIWEDLGLLFQLFSFVFLLLLYMG
*(+)
MGGFRPTIPTFQFCLPPAVIYGLTRLFHGS*(+)
MKQTRQPIYNSRRKTKLKSWNSRPKSSHIITAKSADDEAKYFPLWENCKNQTSSLCSCNICIVR
DGI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	57909839-57909822(+) 57914667-57909845(+) 57909841-57910613(-)
Potential amino acid sequence	MGAEDDDEPPSKRVKVSSSQLVDISDRTFVRDPVSCSLGDSMARPLTLQGDDEVVGTKGVVKKV EFVRIITEALDSLGYKKTRALLEEESGIPLHTSVVNLFMQQILDGKWDESLNTLRNIGLVDEKI VKLASFVILEQKFFELLHKEKVMDALRTLRGEISPLCINNDRVHQLSFFIISPSQQVLTGVSGQ GTARVKSRTELLEELQRLLPPTVMVPEKRLVHLVEQALDLQLDACRFHNSVVGEMSLLSDHHCG RDHIPSLTMQILHEHKDEVWFLQFSHNGKYLASSSADFAVIIWEDLGLLFQLFSFVFLLLLYMG (+) MGGFRPTIPTFQFCLPPAVIYGLTRLFHGS(+) MKQTRQPIYNSRRKTKLKSWNSRPKSSHIITAKSADDEAKYFPLWENCKNQTSSLCSCNICIVR DGI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc07g044850.2_circ_g.2

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