Splice junction sequence |
TTGCAAATTTGGAACTACGTGTAAATATAACCATCCTCGAGATTGGAGCACTCCTAAGTCCAAT TACATGTTCAGCCATCTATGCCTTCCACTTCGTCCGgatatctgaggtctgctgcaaccaaatc tctagctgccaattgctaatgttttctaatagattcgtagcaaatggcttcacaaaattctcct gaaacgcc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 926 Transcript exons: 5174450-5174664,5174887-5175003,5175085-5175357,5175672- 5175992 GATATCTGAGGTCTGCTGCAACCAAATCTCTAGCTGCCAATTGCTAATGTTTTCTAATAGATTC GTAGCAAATGGCTTCACAAAATTCTCCTGAAACGCCAAGCTGATAAATAGTTTCTTCTTAAAAC CTATTTCAAAAATTTTAGTTTGGTGGAGGTGCCAAGAATGGCGCAGCACAAGACTTTCCAGAAC GACAGGGCCAACCTGTATGCGAGTATTATTTGAAGACTGGAACTTGTAAATTTGGTTCCAATTG CAAATATCACCATCCTAAGCAAGATGGATCTGTGCAGTCTGTTATATTAAACAACAATGGATTC CCTCTACGCCTGGGTGAGAAAGAATGCTCCTACTATATGAAGACTGGGCAATGCAAGTTTGGTT CTACATGTAAATTTCATCATCCAGAATTTGGTGGTATTCCGGTGACCCCTGGAATATATCCACC ATTACAATCACCTTCTGTGCCCTCCCCTCATACATATGCTCCAAATTGGCAAATGGGAAGATCA CCTGCAGTTCCTGGATCATATATACCAGGCTCATACACTCCAATGATGATCTCATCTGGAATGG TTCCATTGCAAGGATGGAGCCCTTATCCGGCATCGGTAAATCCTGTGGCATCAGGTGGAGCACA ACAAACTGTTCAAGCTGGACCATTATATGGTATAGGACACCATGGATCTTCCACCGCAATTGCT TATGGTGGTACATACTTGCCATATTCTTCCTCAGCTGGACAATCGAGCAATAATCATCAAGAAC ATGGATTTCCTGAGCGACCAGGGCAGCCTGAGTGTCAATATTATATGAGGACTGGCGATTGCAA ATTTGGAACTACGTGTAAATATAACCATCCTCGAGATTGGAGCACTCCTAAGTCCAATTACATG TTCAGCCATCTATGCCTTCCACTTCGTCCG
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Genomic sequence |
GATATCTGAGGTCTGCTGCAACCAAATCTCTAGCTGCCAATTGCTAATGTTTTCTAATAGATTC GTAGCAAATGGCTTCACAAAATTCTCCTGAAACGCCAAGCTGATAAATAGTTTCTTCTTAAAAC CTATTTCAAAAATTTTAGTTTGGTGGAGGTGCCAAGAATGGCGCAGCACAAGACTTTCCAGAAC GACAGGGCCAACCTGTATGCGAGGTACATTAACACCTTCACACATGAGTTTAACTATCTTTCTA GAAATCTGGTTATCAATCAGACATTGAAGCATTAACCTGGCAACTCCTGCACACTATTTGCATG CTCCCAGTGTAGCTTGTCCATGAGATGCAGGGTGCATAAATATAAAGGAATGTAAAGATTCATG CCTGACTTGTTAACTGTTGGTGCTTTACCATCTGTTCTTTTATTTTTCTATAGTATTATTTGAA GACTGGAACTTGTAAATTTGGTTCCAATTGCAAATATCACCATCCTAAGCAAGATGGATCTGTG CAGTCTGTTATATTAAACAACAATGGATTCCCTCTACGCCTGGTATGAGAATTCTCCTATGATT GTGTTTCTTGGATTTTTTAAGTATTATTGGAAAAAATAATTGACATTAATGAAGTGCAGGGTGA GAAAGAATGCTCCTACTATATGAAGACTGGGCAATGCAAGTTTGGTTCTACATGTAAATTTCAT CATCCAGAATTTGGTGGTATTCCGGTGACCCCTGGAATATATCCACCATTACAATCACCTTCTG TGCCCTCCCCTCATACATATGCTCCAAATTGGCAAATGGGAAGATCACCTGCAGTTCCTGGATC ATATATACCAGGCTCATACACTCCAATGATGATCTCATCTGGAATGGTTCCATTGCAAGGATGG AGCCCTTATCCGGTAAATAATTTGGACAAAATGCTTTATTTTGATAGAAGGAAAGGTTCCTACC AACAAGCTTCTACCAAGATATAAAGCAAATGAGCAAGCTCTTTCATGAGCTAGTCTAGGATTCT CAGTTGATCATTATCTAGCAAGATCTAAAAGACATTCAAGTATGTCTTACCTGAAATTTCTTGG CATTGTCAAGAAAATAAATAATATAGGGCAATAAAGATGACTTGTTTGATAAATAATAGGGAGC AAACTATTTTGTTAACTAAAAGAGCAAGGTACTATTCTCCCCAAAAATTTAACTCTTCTGTTTG ATGCAGGCATCGGTAAATCCTGTGGCATCAGGTGGAGCACAACAAACTGTTCAAGCTGGACCAT TATATGGTATAGGACACCATGGATCTTCCACCGCAATTGCTTATGGTGGTACATACTTGCCATA TTCTTCCTCAGCTGGACAATCGAGCAATAATCATCAAGAACATGGATTTCCTGAGCGACCAGGG CAGCCTGAGTGTCAATATTATATGAGGACTGGCGATTGCAAATTTGGAACTACGTGTAAATATA ACCATCCTCGAGATTGGAGCACTCCTAAGTCCAATTACATGTTCAGCCATCTATGCCTTCCACT TCGTCCG |