Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d002654_circ_g.3 |
ID in PlantcircBase | zma_circ_000998 |
Alias | circ2347 |
Organism | Zea mays |
Position | chr2: 18318809-18319133 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d002654 |
Parent gene annotation |
naked endosperm1 |
Parent gene strand | - |
Alternative splicing | Zm00001d002654_circ_g.1 Zm00001d002654_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d002654_T002:1 Zm00001d002654_T018:2 Zm00001d002654_T008:1 Zm00001d002654_T007:1 Zm00001d002654_T013:1 Zm00001d002654_T020:2 Zm00001d002654_T001:1 Zm00001d002654_T014:1 Zm00001d002654_T019:2 Zm00001d002654_T021:2 Zm00001d002654_T003:1 Zm00001d002654_T015:1 Zm00001d002654_T004:1 Zm00001d002654_T022:1 Zm00001d002654_T010:2 Zm00001d002654_T023:1 Zm00001d002654_T026:2 Zm00001d002654_T025:2 Zm00001d002654_T009:1 Zm00001d002654_T011:2 Zm00001d002654_T006:1 Zm00001d002654_T016:1 Zm00001d002654_T005:1 Zm00001d002654_T012:2 Zm00001d002654_T024:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.208479385 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |