CircRNA Name |
BGIOSGA019220_circ_ig.1 |
ID in PlantcircBase |
osi_circ_015930 |
Alias |
Chr05:3421664_3431256(MH63RS2), Chr05:3422211_3431688(MH63RS2), Chr05:3422567_3432521(MH63RS2), Chr05:3421664_3431256(MH63RS2), Chr05:3422211_3431688(MH63RS2), Chr05:3422567_3432521(MH63RS2), Chr05:3423097_3432730(MH63RS2) |
Organism |
Oryza sativa ssp. indica |
Position |
chr5: 3603524-3608445 JBrowse» |
Reference genome |
Oryza_indica.ASM465v1.42 |
Type |
ig-circRNA
|
Identification method |
CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2 |
Parent gene |
NA |
Parent gene annotation |
NA |
Parent gene strand |
NA |
Alternative splicing |
BGIOSGA019219_circ_ag.1 BGIOSGA019219_circ_ag.2 BGIOSGA019219_circ_ag.3 BGIOSGA019219_circ_igg.1 BGIOSGA019219_circ_ag.2 BGIOSGA019219_circ_igg.3 BGIOSGA019219_circ_ag.4 BGIOSGA019219_circ_ag.5 BGIOSGA019219_circ_ag.6 BGIOSGA019219_circ_ag.7 BGIOSGA019220_circ_igg.1 |
Support reads |
NA |
Tissues |
root, leaf, panicle |
Exon boundary |
NA-NA
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
NN-CC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
NA
|