Detail information of BGIOSGA038236_circ_g.1


General Information
CircRNA Name BGIOSGA038236_circ_g.1
ID in PlantcircBase osi_circ_018964
Alias Chr06:31642086_31644844(MH63RS2)
Organism Oryza sativa ssp. indica
Position chrAAAA02037079.1: 6897-9658  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRI2
Parent gene BGIOSGA038236
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-CA
Number of exons covered BGIOSGA038236-TA:7
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ATGGGATTTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTGAGTATGTTGTTCATC
AAGGAATACCATCGTTAGGAGGACCATCACTAAGCAggtggtttgctaagcgctttctacatcc
tgatgttgtggctatctacggttttatctttttatgggatgaagaccttggagtggacaacttt
gacccgag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGTGGTTTGCTAAGCGCTTTCTACATCCTGATGTTGTGGCTATCTACGGTTTTATCTTTTTATG
GGATGAAGACCTTGGAGTGGACAACTTTGACCCGAGAAGGTATGGCCCAGGTTGTAGGCCTTCT
GCTCTAGGCAGATATGTTATTCAGTGCTCAGTATGAAGTAAAACATACCATCTCACCATCCAAG
ATCTTGATATCAGCACCTCTTTGCTAGTGTACTTAGTTCAGTCAATTTGAAGTTTCATATGCTT
TCATGTTATGTGCTGCAGGGAACTGAAATTTTGCTTATGATTCAATAGTTTGTCCTGCGAACTC
TTAGCCCCTGTACAGATTGTGGGGGCCTTTTTCAGTTTCCCGTGGGAAATGAAACGGTTCACAT
GAAATTCCTGAGCTCTAAAGTCTAAAACCTGTGTTTTGTTGAACAACATTGATACCTTGGGCAG
CACATTTGCCGATTTATGAAATTTAACATGTGTTGACCTTTCTCCTGTGTTCATGTTCTAATCT
CGGCATCTTACATGCTAATGCTACTATGCTACTCCCTCCGTTCCAAAATATTGCAACCTAGGAT
GGGTCTACTACGAATCTGGACAAAGATTCGTAGATGAGACGTGCTGCTGAAACGTGGGCAGCGT
TTGTTGTTGATACGACTCCTGTGAGTTGTGACACCTAATCCTTGCGATGATGGAATGGAAAAAT
TGACACCTAATCAGATTCGTATTACTAGGATGGGTCTGATCCCAGGCCCATCCTAGGTTGCAAT
ATTTTGGGACAGAGGGAGTAGTAATTAGTCAGCTATACTAGCTCTTCCTGTCACTGTATATAGA
CCAAAATCTGATCAGCCAATATGTTGGTAGCTTACAAATCTACTACTTCCTCCGTTTCAAAATG
TAAGACTTTCTAGCATTGCCCACATTCATATAGATGTTAATGAATCTGGACATAACATCTGTAT
GAATGTGGGATATATGTCTAGATTCATTAATATCTATATGAATGTGGGCAATGCTAGAAAGTCT
TACATTGTGAAACGGAGGGAGTAGCATTTATTCAGATGGAAGAGTGTATTTTTCTTTTTTAGCC
TTTTGCATGAGGTTTTGGGACGGAGTTTGTTGTTGATGATATATATATTTTGGTGGAGCGATCT
TTACTTACTTTTTTTTTGACGTAAAACAGTAGGAGAGGCTCCTACTATGCTAGATCTTTACTTA
CTTTGGTCATTGATGTTATTGTATCCGTAGTATATTGCTCCTCTTTTTGTGCTGAAAGTGCCTT
CTCATTTGCATGTTCTCTTCCTAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACA
CAACCTGCTCTGGACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGA
TGATGAAAGTGCATAGGTGCCATGTCTTTGTAATTTTCAATTTTTTCACATCTCAAAACGTCAT
TTGTTTTTGCTAATAAATGCACCATTCTTTTTTAATGATTATTTAGGAGAATATATGATAACCG
TGCAAGTATGAATTGTTCTGATGGAAGTAAAGGACCTCCATGCACAGGGTAAAGATTGTTTAGC
CTCATGAGCTTACTTTTGATTCTATTCCAAGTCATATTTTGCTGTTGCTGTTTTGTTCGTTGGC
CTAGAGTTTATCTGGTTATCTGCCCTTCTTTATTTTAAATCTTGACACAATTTATTTTTCTAAT
ATTTAGTAACCGCCAGATCATGGGTTGAATGAATGTTTGAGAATATTGTACTTTTCTTTCTTGG
ATAGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTGCTTGGAGATGTGTATGGCATTT
GATTCAGGTGCAAATTCTGATAGTGCAGTCTCAATTTACCCTGCCATCTGATTATATTGATGTT
GACTGAAATGTTGTAACTCTTTTCTTGACGCAGAATGACCTGATCCATGGATGGGGCCTTGACA
TGAAGCTTGGTTATTGTGCTCAGGTACTCAAGATAATACACAATCATGCACTACAGCTCTATGC
AAGAATCATGAACTGTTTGATTTCTTTTTTGTTATTTTCTAGGACATCCTGTTAAAGGCATTCA
CTGATAGTACAAGATGGCCTGACAATGTTTGTTCATTTATTGTTTATATCCACCATCGCTTGTA
AAAGGTTTTTCACCTGTGAGATGTGTAAGAAGCCACAATCCACCGAATTCCAGTTAGGTGTTTT
TTTTGGAGGAAGGTGCTTTATTAATTAGCTAGGAGTTCACAATTGACAAGGGATTGAGTATAAG
TTGGAGCTTGCAATCTCCAAAACGCACAATGCCTAGCCCTTCTAGCTTTGCACTAACTCATGAG
CTACTAAATTACACCCTCTACTAATACACCTTACTATGACCTGTGAAAGCATCTGCATCAACCC
TCGAATTTCTAAAATTGTGTAGTTAGGTGTCTTTTTGGTCCTCGGTTTAATAGTTCCTGTCATG
TTATCTTCTTTTTCTTATGTATCATGTGGCTTTGTTGCTACTTTATTGCTCAAATTTCGCCGAT
GTTTGATCTATCATCTCATCATTGATGAAGATTCATTTTTGTTTTACATAGCATATGTTGATTG
AGAATGAAAGTAACCAAAATATTAATGAATGTAGCGCCATGGGATTTCAGGGTGATCGAGCTGA
GAAGGTTGGCGTAATCGACAGTGAGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCA
TCACTAAGCA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021