Splice junction sequence |
ATATTTCCTGCAGCTTGCTCTTAAGGATGCTGATAAGCTAATGAGTCTTCAGAGCAGTTTAGTG AAGTCATATATTACAAAGGCTTGTGCCCTCATGTTGtttctggaatctcttgcttcgatcgaat cactctcatgtctaacgaagactctcttccgcctttcactttgtttggtttggatgatgtcgaa aattacgg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 461 Transcript exons: 6421398-6421501,6421644-6421745,6422098-6422180,6422359- 6422443,6422528-6422614 TTTCTGGAATCTCTTGCTTCGATCGAATCACTCTCATGTCTAACGAAGACTCTCTTCCGCCTTT CACTTTGTTTGGTTTGGATGATGTCGAAAATTACGGTCTGGTCACTGAAGCAGACAATTCGTTA CCTTTAGATATACACAATCAGGTTTTTCAACTTGTGGAGAAGGGAAACCAATCATTCAAAGAGT CTCGCTTTGAAGAGGCTATTAGCAGTTATTCAAAGGCCAATTCTATTAAACCTCTTGACCCTAT TGTTCTTGGCAATAGAAGTGCTGCTTATATAAGATTTGGCCAATATCTGAAGCAGAGATCTGCA TCAATTTCTGAATATAAACCTCTGAATGGTTTTGATATGTCGATGCTTGGTGAACTTGCTCTTA AGGATGCTGATAAGCTAATGAGTCTTCAGAGCAGTTTAGTGAAGTCATATATTACAAAGGCTTG TGCCCTCATGTTG
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Genomic sequence |
TTTCTGGAATCTCTTGCTTCGATCGAATCACTCTCATGTCTAACGAAGACTCTCTTCCGCCTTT CACTTTGTTTGGTTTGGATGATGTCGAAAATTACGGTCTGGTGAGTTCTCTTTGGATTTACTTC GTTTTGATTTGAAGAGTAGCAATGCATGTTCTAGTTTCCGATTGTTGATTTAGATTTTCGTTAG GGTGATTTATTTGTCTCAGTTATCTAAATTCTCTTCCTTGCTTGATATTTCCAGGTCACTGAAG CAGACAATTCGTTACCTTTAGATATACACAATCAGGTTTTTCAACTTGTGGAGAAGGGAAACCA ATCATTCAAAGAGTCTCGCTTTGAAGAGGTGAGAGAGCTCTTTTCAGATCATTCTTTGCCTTGT TTCTTTCTTTAGGGATTCCCTGAGATGTATGTGTAGGGAGAAAATTAGGTTCTTACAAAACATG ATGATGATAAATAGTCTTAGGTCCTTCAATAAAACTGATTTGGGCTCTCTCTTGTAGTTTACTT GTGGACTAGTTTTTTGGTTGCATTAGTCATATGAAACATGTTTAATTCTGGCTTTGAAACTGCT TATCAACCTGTTTTAGTAGAATATTCTGCAAATTCGTGCTAGTTTAAAGCTTTGATGCTGAAAC CCAAATGATATGGAGAAATCTCTTGTTCTTGCTAATAACATAGCTTCATTTTTTTCCCAGGCTA TTAGCAGTTATTCAAAGGCCAATTCTATTAAACCTCTTGACCCTATTGTTCTTGGCAATAGAAG TGCTGCTTATATAAGGTATGGTTTCACAAAACCGATGCCATCCTTTTTACTTCCAATGGAGTTG TCATGTTGTTTTGATATAAGATTACATTGGATTGTGTAGCTAGTTTTGCCTTTGTACTCTCTGT ATAAGTATTAAACCGTGTTGACATATTCTAATTTCTCTCCATCTCCATCCTTTTTTTGATTATA GATTTGGCCAATATCTGAAGCAGAGATCTGCATCAATTTCTGAATATAAACCTCTGAATGGTTT TGATATGTCGATGCTTGGTGAAGTATGTATTCTACTTACTTAAACTGTTACTAGCAGTTGCAAA CTTCATCGACTCATATCCTGGAAAACTTGATATTTCCTGCAGCTTGCTCTTAAGGATGCTGATA AGCTAATGAGTCTTCAGAGCAGTTTAGTGAAGTCATATATTACAAAGGCTTGTGCCCTCATGTT G |