Plant Circular RNA Database

Detail information of Zm00001d032801_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d032801_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006823
					
						Alias
						zma_circ_0000442
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 238615468-238620143  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d032801						
					
						Parent gene annotation
						
							 chromatin complex subunit A
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d032801_T009:3
Zm00001d032801_T028:3
Zm00001d032801_T001:3
Zm00001d032801_T012:3
Zm00001d032801_T019:3
Zm00001d032801_T026:3
Zm00001d032801_T007:3
Zm00001d032801_T011:3
Zm00001d032801_T005:3
Zm00001d032801_T008:3
Zm00001d032801_T002:3
Zm00001d032801_T013:3
Zm00001d032801_T029:3
Zm00001d032801_T003:3
Zm00001d032801_T018:3
Zm00001d032801_T025:3
Zm00001d032801_T015:3
Zm00001d032801_T024:3
Zm00001d032801_T023:3

General Information
CircRNA Name	Zm00001d032801_circ_g.1
ID in PlantcircBase	zma_circ_006823
Alias	zma_circ_0000442
Organism	Zea mays
Position	chr1: 238615468-238620143 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d032801
Parent gene annotation	chromatin complex subunit A
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d032801_T009:3 Zm00001d032801_T028:3 Zm00001d032801_T001:3 Zm00001d032801_T012:3 Zm00001d032801_T019:3 Zm00001d032801_T026:3 Zm00001d032801_T007:3 Zm00001d032801_T011:3 Zm00001d032801_T005:3 Zm00001d032801_T008:3 Zm00001d032801_T002:3 Zm00001d032801_T013:3 Zm00001d032801_T029:3 Zm00001d032801_T003:3 Zm00001d032801_T018:3 Zm00001d032801_T025:3 Zm00001d032801_T015:3 Zm00001d032801_T024:3 Zm00001d032801_T023:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCATGTTATGCGCCAAAATGCACCCAAGACCTTTATCCCTGGATTTGACCTTTTTAACAGATTG
AATAACATTTTCCCACATAAACCTTATTCCTTCAACctgcaaagcataagtaatttcgtttgca
gaatttttgtccttcacatgctttccaagggataaatttctaaatgatgaataaccaatgagaa
gcactcca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGCAAAGCATAAGTAATTTCGTTTGCAGAATTTTTGTCCTTCACATGCTTTCCAAGGGATAAA
TTTCTAAATGATGAATAACCAATGAGAAGCACTCCACCCTTCACTCGCCATTTAGTTAGTAAAT
CTGGCCTTTTCACCCTGCAAAGAAAAGATCAGATGGAGCATTTCATCCTAGTCCTAGTAGGTAC
AGATTTACTATAGGGAAACAATACTCCATGTAATTAAAGGAAAAAATACCAAGACACCATAAGT
AAATAATTCAACCATGCAATGCAATGAAAAAAACATCCCTAAACAATGCAACATAGAGAAGGCC
AATAAACCAATGAGGTGAAAGTAAGGCTTGCCCCATAATCAAGCAGATATTTGTTGAAACATTT
GATCTAGTGAGATTGTTAGAGGGGATCACACTAAAAAATAAGAAACTGTAACAAAAAGGACAAT
AGAGTAAAAGGACAATTAAGCGAACTTTGGAAGCTTTCATCTTTGAGTAGTGCTGACCCCAGAT
TCGAGAAAAACAATCAGAATGACCTAGATTCTGGGAATGCCACTATTGAATTCATGCATCAAAG
GAACCAAATGTGTGCATTATGTATATAATTTATAATATATATGTAGCTCCAACATTAAGTTTCC
AATGTACCAATAAGTGTTAAAACACATGGGCCTAATCAAGGAATTTGAAATAACTAGAATATAA
GCCATTTTGTCAGGTAAAACTACAGCAGGATGCCTGCGACCATTACAGCATTGAAGCGTCTTTC
ATAGAATGTTTGTAGTTGAGTTGCAACCTCCCATCCCGACCCACCTGTAGCTGTTTTGACAATG
TGTTGTTTAGGACTTGCAGTGTTTTATCTTCTTTCCTAACTCTGTAAACCTTTCATAAACATAT
GTACCACATATGCACATATGTTGTCTTGGGGAAGGTGCAGGAAATTCTTTAAAATTTGGCTTCT
TAAGGAAAATACATGGAAAAAGGAAAATTAATAGGCTAGTAGTTAAAGTTTCATCTAGCAGACC
GCACCATCTCCAATTCAAGTATTCAACATACACTTATAAAGATGGATTTTGAATATATGTGCAT
ATATTCACAAGGAATCTGTTATGGTCGCTAGATCGGTGAGGGATTGGAGAGAGGTATCGATGGG
TAGGAACGTCGGCCGGGGGCCTCTGCCCACGGCCGAGCAAGAGGAGTGTTTCTCCCTTCTAATT
CTTGCCTACTTTATTTCTCATCCATTGATTACATAAATAGGCCAGTTGGCCGCCCCTATCTAGC
TAAAGATCCTTATCTCCTTAAAACTCTCCTAAAAACTCTCGACAACTACTAACTGATAACCTTC
CTAGATAACCTCAACTAATCTCCTAGATAATCTCAACTAATCTTCTAATCTTATCTCTAACTAT
CCTTATCTAATCCCCCTTGGAGGGCCCATGGCTGCTGCTGCCGCAGCCCCTCCGTGGGCCTCCT
TAGGCCCTGACAGAATCTACCCTATTTTTCGCATCCAGAATGAACATCTTGTAGTTATATATGC
AATATATTGGCACATAAAGGCTCTCGCATCTTTAGGTGAGAAAAAAATACTAGTTGTATGTATT
CACAATAATGTAACAAAACAAGAAATTTATCTGCACCTTGCAACATCTTCCAACATAAAAACGC
GAAGAGGCTTCAGCTCTGCTGGACGCCACTTGCTAAACTCTTTCCTCCAGTTATGAAGAACATT
GACAGGGGTGACAACAAGTGCTGTGCGCAATCCCAATTGAGCACATCTCATAACAGTGTAGAGG
AATGTAATAACCTGCAAGGTGCGAAAGAACAAACATAAGAGGGTAACTCCCATTATGTCATGTA
ATGTAATGGAACATTATAACTGCATAAGTACAAAAATTAAAGAGTTAAATGCATGAGCGGCCCA
TAACTTGTCAAGGGATGTCACTTAGGTTCACAAACTTTGAAAATGCATTTCTAGGTCCTTGAAC
TTGTTAGATGTATTGTGTGCGTACTGATATATTGTGTCTTTGTCCCTGTGTTGAACCTAGGCCC
ACCTACCACTATTAATACATCGGTTAACCTTGGTTTAGGGTTAGGGTTTCACTTCTATCATGGT
ATCAACCATGTTTCTTTCCTGAGAAAATTCTTCTTTCCGCTTCCACTTTTATCCCCATCTGGCT
CATGCTTGGCGGCATACTCTTTGCAGGACCTTCGGCCTCAGGAGATCAACCCCATCCCACGATG
GTGCTCACGGCTGGCACGCGGCCCATCTCCACCGCCTGGAATCAAGGATCGTCAACGTTGTCCA
CCTCCGTCCCCTCCATGTTGCCTCGACTCAACTTGCTGCTTCCGCCAGGCCGCCGCGCCTCCTC
TAGTCGCGGCTCCCTGCCATGTCGTCTCACCTCCGTCAGGCAGCCGCGACGCCTCCTGGTTCAC
CGCCTCCTCATCACCCTCCCTGGGTTGTGCTCCCGCTGGGTCACCGCCCCCTCTTGTCGTCGCC
TCTCCTTCAGACGACCGCCTTCGACCACCACCACCCCTTCCTCACTCGTCTGGGCCGACATCTT
CCTGACCGACACCCCTGGCCGCCACTCTTCTCTCAGGCGATTGCCCGACTCCTCTGGCCGCTCT
CAGTAGGGCCGCCCTTTCTCTCACCACTCACTCGATCGTTTGCATGGCGGCTCCCCTACGCTCG
CCACCCTCCATGTCGCGGCTCAGACCGCCCACGCCCTCTGTGCCTGCGGCCTCCCCTCCCCCGA
CCTCCTCTTCCCCGACAGCAACAGCGACGCACCTCTTCCCTTCTCAGCGGCCAGCACCACGTCC
ACCACCGGCGGCCCCACGTTCCTCAGCAGCAGCGCAGCTCCCCTCCACGACGGCACGACCCTCT
CTCTCTCCTGGTCGTCGTTGCTCACTATGGTCCACGCCTTGGCCATGCGCGCACCTCCTGACAC
TGCCCCTCCTCTACATGACGCGTCGCACGCCGCTGACTACCCTCTGCACGGCGCACCTGCGCAC
ACTTCCGTCGCGCCCTTGACGCCCCTCCTTCACTCAGACATGGTTCACGTGCCTCCCTACCGTG
TCTTTGTCTCCCTTGACGACGGCCTGCGTCAACGGGGCACATTCGTGGCATTTGATCGAGTCAT
GAACCCAGTCCTCAGTGACTGCGTTGAGCTCTACCCTCAGGAGGGCCGCCACATTACCGGGTCG
TTTTTGTACCCCAGCACCACGATTGTCTCCATGACGATCAAGACCTTGTCTTCTTTGGTTCTTC
CCCACCATGATTGTCGCCAGCATGTTCACTTCCGGCCTAGCACCCCTTCCAGTGACTCTATGGG
GGTGCCCCCGATGACTCTCTCATCCTTCCCCATATCATCGCCACCCCCTCCTCCGACCGACTGG
GTTATCGACTCCGACGCCTCGTTACTCACCACTCCCAACCCCAGAATTGTCTCTTTACCCCATC
CCATAACCCCACTTCTCCTTCCTCCATCATTGTCGATAATGGATCAACTCTCTGCCTATCACCT
TAAAACCCTAAAACCCTGGTTGCCCCTAGCATACCAATAACATCCTAGTTGCCCCTAACATCCT
GGTCCTTTGTACCTCAATAACATCCTGGTTGCCCCTAACATCATCCAGAACCTTCTCCTGTCGC
TTCACTACTAATAATCGTTGTTCTATGAAGTTCGATCCCTGGGGGCTCACTATCCGAGATCTTA
CCACTCGTGTTGTGCTTGCTCGATGCGGCAACTTCAGCCCCCTCTACCCCATTCACTTCCCCAC
TCCACCTTCCTCAGTTCATGTTGTCCAACCATACGTCGTTGCCACCACTGCGTCTACCTCCACA
TGGCACTGTCGTCTTGGCCACCCCGAACACGACGTCCTCTCCAGACTCTTGGCCATCCCTTGCC
CCTGTGGCACCACCACCCCACTTTGCCATGCCTGTCAGCTTGGACGCACACTCGCTTACCCTTT
TCCTCTTTACTATCACGCGCTACTCGCCCCTTCGACCTCATCCACTGTGACCTTTGGACATCCC
CCCTTCCCAGCATCTCCAGTATGAGGTACTATCTCGCCATTCTGGATGACTTCTCTCACTATTT
GTGGACCTTTCCCCTCTGTTGTAAGTCTAACACCTCCCACCTTTCTCACTTCTTCGCGTGAGTG
TCGACTCAATTCGGTCGTACCATCCAAGCTCTTCAGTGCGACAATGAAAGGGAGTTTGATAACT
CTACGTCTTACACCTTTCTCTCCCACGGCGTGCATTTAACTCAAAATTGAATGTCAGCCCAAAA
ATGTATTTACAAAGTTTGTGGACCTAAGTGACATCTCTTAACAAGGGCCCACGATGCATTTAAC
TCAAAATTGATGTCAGCCCAACAATAACTTCATCACAAATATAAGAATACATGTACAAAAATTG
AAGTTTCTGGCATGCATGATCTAGTTCCAGCACATAATTGATTGTCATGGGTACAATAGGTGCA
GCATACAATGAACGAATAACTCTTGAAGAAAATGTAAATATATATCCAAGCTATAAGCCAACAG
CCCAACACAGACCTGAAAAGTTTTCCCAAGGCCCATGTTATGCGCCAAAATGCACCCAAGACCT
TTATCCCTGGATTTGACCTTTTTAACAGATTGAATAACATTTTCCCACATAAACCTTATTCCTT
CAAC
						
					

			
		

Sequences
Splice junction sequence	CCATGTTATGCGCCAAAATGCACCCAAGACCTTTATCCCTGGATTTGACCTTTTTAACAGATTG AATAACATTTTCCCACATAAACCTTATTCCTTCAACctgcaaagcataagtaatttcgtttgca gaatttttgtccttcacatgctttccaagggataaatttctaaatgatgaataaccaatgagaa gcactcca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGCAAAGCATAAGTAATTTCGTTTGCAGAATTTTTGTCCTTCACATGCTTTCCAAGGGATAAA TTTCTAAATGATGAATAACCAATGAGAAGCACTCCACCCTTCACTCGCCATTTAGTTAGTAAAT CTGGCCTTTTCACCCTGCAAAGAAAAGATCAGATGGAGCATTTCATCCTAGTCCTAGTAGGTAC AGATTTACTATAGGGAAACAATACTCCATGTAATTAAAGGAAAAAATACCAAGACACCATAAGT AAATAATTCAACCATGCAATGCAATGAAAAAAACATCCCTAAACAATGCAACATAGAGAAGGCC AATAAACCAATGAGGTGAAAGTAAGGCTTGCCCCATAATCAAGCAGATATTTGTTGAAACATTT GATCTAGTGAGATTGTTAGAGGGGATCACACTAAAAAATAAGAAACTGTAACAAAAAGGACAAT AGAGTAAAAGGACAATTAAGCGAACTTTGGAAGCTTTCATCTTTGAGTAGTGCTGACCCCAGAT TCGAGAAAAACAATCAGAATGACCTAGATTCTGGGAATGCCACTATTGAATTCATGCATCAAAG GAACCAAATGTGTGCATTATGTATATAATTTATAATATATATGTAGCTCCAACATTAAGTTTCC AATGTACCAATAAGTGTTAAAACACATGGGCCTAATCAAGGAATTTGAAATAACTAGAATATAA GCCATTTTGTCAGGTAAAACTACAGCAGGATGCCTGCGACCATTACAGCATTGAAGCGTCTTTC ATAGAATGTTTGTAGTTGAGTTGCAACCTCCCATCCCGACCCACCTGTAGCTGTTTTGACAATG TGTTGTTTAGGACTTGCAGTGTTTTATCTTCTTTCCTAACTCTGTAAACCTTTCATAAACATAT GTACCACATATGCACATATGTTGTCTTGGGGAAGGTGCAGGAAATTCTTTAAAATTTGGCTTCT TAAGGAAAATACATGGAAAAAGGAAAATTAATAGGCTAGTAGTTAAAGTTTCATCTAGCAGACC GCACCATCTCCAATTCAAGTATTCAACATACACTTATAAAGATGGATTTTGAATATATGTGCAT ATATTCACAAGGAATCTGTTATGGTCGCTAGATCGGTGAGGGATTGGAGAGAGGTATCGATGGG TAGGAACGTCGGCCGGGGGCCTCTGCCCACGGCCGAGCAAGAGGAGTGTTTCTCCCTTCTAATT CTTGCCTACTTTATTTCTCATCCATTGATTACATAAATAGGCCAGTTGGCCGCCCCTATCTAGC TAAAGATCCTTATCTCCTTAAAACTCTCCTAAAAACTCTCGACAACTACTAACTGATAACCTTC CTAGATAACCTCAACTAATCTCCTAGATAATCTCAACTAATCTTCTAATCTTATCTCTAACTAT CCTTATCTAATCCCCCTTGGAGGGCCCATGGCTGCTGCTGCCGCAGCCCCTCCGTGGGCCTCCT TAGGCCCTGACAGAATCTACCCTATTTTTCGCATCCAGAATGAACATCTTGTAGTTATATATGC AATATATTGGCACATAAAGGCTCTCGCATCTTTAGGTGAGAAAAAAATACTAGTTGTATGTATT CACAATAATGTAACAAAACAAGAAATTTATCTGCACCTTGCAACATCTTCCAACATAAAAACGC GAAGAGGCTTCAGCTCTGCTGGACGCCACTTGCTAAACTCTTTCCTCCAGTTATGAAGAACATT GACAGGGGTGACAACAAGTGCTGTGCGCAATCCCAATTGAGCACATCTCATAACAGTGTAGAGG AATGTAATAACCTGCAAGGTGCGAAAGAACAAACATAAGAGGGTAACTCCCATTATGTCATGTA ATGTAATGGAACATTATAACTGCATAAGTACAAAAATTAAAGAGTTAAATGCATGAGCGGCCCA TAACTTGTCAAGGGATGTCACTTAGGTTCACAAACTTTGAAAATGCATTTCTAGGTCCTTGAAC TTGTTAGATGTATTGTGTGCGTACTGATATATTGTGTCTTTGTCCCTGTGTTGAACCTAGGCCC ACCTACCACTATTAATACATCGGTTAACCTTGGTTTAGGGTTAGGGTTTCACTTCTATCATGGT ATCAACCATGTTTCTTTCCTGAGAAAATTCTTCTTTCCGCTTCCACTTTTATCCCCATCTGGCT CATGCTTGGCGGCATACTCTTTGCAGGACCTTCGGCCTCAGGAGATCAACCCCATCCCACGATG GTGCTCACGGCTGGCACGCGGCCCATCTCCACCGCCTGGAATCAAGGATCGTCAACGTTGTCCA CCTCCGTCCCCTCCATGTTGCCTCGACTCAACTTGCTGCTTCCGCCAGGCCGCCGCGCCTCCTC TAGTCGCGGCTCCCTGCCATGTCGTCTCACCTCCGTCAGGCAGCCGCGACGCCTCCTGGTTCAC CGCCTCCTCATCACCCTCCCTGGGTTGTGCTCCCGCTGGGTCACCGCCCCCTCTTGTCGTCGCC TCTCCTTCAGACGACCGCCTTCGACCACCACCACCCCTTCCTCACTCGTCTGGGCCGACATCTT CCTGACCGACACCCCTGGCCGCCACTCTTCTCTCAGGCGATTGCCCGACTCCTCTGGCCGCTCT CAGTAGGGCCGCCCTTTCTCTCACCACTCACTCGATCGTTTGCATGGCGGCTCCCCTACGCTCG CCACCCTCCATGTCGCGGCTCAGACCGCCCACGCCCTCTGTGCCTGCGGCCTCCCCTCCCCCGA CCTCCTCTTCCCCGACAGCAACAGCGACGCACCTCTTCCCTTCTCAGCGGCCAGCACCACGTCC ACCACCGGCGGCCCCACGTTCCTCAGCAGCAGCGCAGCTCCCCTCCACGACGGCACGACCCTCT CTCTCTCCTGGTCGTCGTTGCTCACTATGGTCCACGCCTTGGCCATGCGCGCACCTCCTGACAC TGCCCCTCCTCTACATGACGCGTCGCACGCCGCTGACTACCCTCTGCACGGCGCACCTGCGCAC ACTTCCGTCGCGCCCTTGACGCCCCTCCTTCACTCAGACATGGTTCACGTGCCTCCCTACCGTG TCTTTGTCTCCCTTGACGACGGCCTGCGTCAACGGGGCACATTCGTGGCATTTGATCGAGTCAT GAACCCAGTCCTCAGTGACTGCGTTGAGCTCTACCCTCAGGAGGGCCGCCACATTACCGGGTCG TTTTTGTACCCCAGCACCACGATTGTCTCCATGACGATCAAGACCTTGTCTTCTTTGGTTCTTC CCCACCATGATTGTCGCCAGCATGTTCACTTCCGGCCTAGCACCCCTTCCAGTGACTCTATGGG GGTGCCCCCGATGACTCTCTCATCCTTCCCCATATCATCGCCACCCCCTCCTCCGACCGACTGG GTTATCGACTCCGACGCCTCGTTACTCACCACTCCCAACCCCAGAATTGTCTCTTTACCCCATC CCATAACCCCACTTCTCCTTCCTCCATCATTGTCGATAATGGATCAACTCTCTGCCTATCACCT TAAAACCCTAAAACCCTGGTTGCCCCTAGCATACCAATAACATCCTAGTTGCCCCTAACATCCT GGTCCTTTGTACCTCAATAACATCCTGGTTGCCCCTAACATCATCCAGAACCTTCTCCTGTCGC TTCACTACTAATAATCGTTGTTCTATGAAGTTCGATCCCTGGGGGCTCACTATCCGAGATCTTA CCACTCGTGTTGTGCTTGCTCGATGCGGCAACTTCAGCCCCCTCTACCCCATTCACTTCCCCAC TCCACCTTCCTCAGTTCATGTTGTCCAACCATACGTCGTTGCCACCACTGCGTCTACCTCCACA TGGCACTGTCGTCTTGGCCACCCCGAACACGACGTCCTCTCCAGACTCTTGGCCATCCCTTGCC CCTGTGGCACCACCACCCCACTTTGCCATGCCTGTCAGCTTGGACGCACACTCGCTTACCCTTT TCCTCTTTACTATCACGCGCTACTCGCCCCTTCGACCTCATCCACTGTGACCTTTGGACATCCC CCCTTCCCAGCATCTCCAGTATGAGGTACTATCTCGCCATTCTGGATGACTTCTCTCACTATTT GTGGACCTTTCCCCTCTGTTGTAAGTCTAACACCTCCCACCTTTCTCACTTCTTCGCGTGAGTG TCGACTCAATTCGGTCGTACCATCCAAGCTCTTCAGTGCGACAATGAAAGGGAGTTTGATAACT CTACGTCTTACACCTTTCTCTCCCACGGCGTGCATTTAACTCAAAATTGAATGTCAGCCCAAAA ATGTATTTACAAAGTTTGTGGACCTAAGTGACATCTCTTAACAAGGGCCCACGATGCATTTAAC TCAAAATTGATGTCAGCCCAACAATAACTTCATCACAAATATAAGAATACATGTACAAAAATTG AAGTTTCTGGCATGCATGATCTAGTTCCAGCACATAATTGATTGTCATGGGTACAATAGGTGCA GCATACAATGAACGAATAACTCTTGAAGAAAATGTAAATATATATCCAAGCTATAAGCCAACAG CCCAACACAGACCTGAAAAGTTTTCCCAAGGCCCATGTTATGCGCCAAAATGCACCCAAGACCT TTATCCCTGGATTTGACCTTTTTAACAGATTGAATAACATTTTCCCACATAAACCTTATTCCTT CAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.027605924

Conservation Information
Conserved circRNAs	NA
PMCS	0.027605924

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							238617185-238615527(+)
238620127-238615470(-)
						
						Potential amino acid sequence
						
							MKNIDRGDNKCCAQSQLSTSHNSVEECNNLKSFPKAHVMRQNAPKTFIPGFDLFNRLNNIFPHK
PYSFNLQSISNFVCRIFVLHMLSKG*(+)
MWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQVITFLYTVMRCAQLGLRTALVVTPVNVLHN
WRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWRVKGGVLLIGYSSFRNLSLGKHVKDKNS
ANEITYALQVEGIRFMWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQVITFLYTVMRCAQLG
LRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWRVKGGVLLIGYSS
FRNLSLGKHVKDKNSANEITYALQVEGIRFMWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQ
VITFLYTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLT
KWRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEITYALQVEGIRFMWENVIQSVKKVKSRDKGL
GCILAHNMGLGKTFQVITFLYTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVF
MLEDVARVKRPDLLTKWRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEITYALQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	238617185-238615527(+) 238620127-238615470(-)
Potential amino acid sequence	MKNIDRGDNKCCAQSQLSTSHNSVEECNNLKSFPKAHVMRQNAPKTFIPGFDLFNRLNNIFPHK PYSFNLQSISNFVCRIFVLHMLSKG*(+) MWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQVITFLYTVMRCAQLGLRTALVVTPVNVLHN WRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWRVKGGVLLIGYSSFRNLSLGKHVKDKNS ANEITYALQVEGIRFMWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQVITFLYTVMRCAQLG LRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWRVKGGVLLIGYSS FRNLSLGKHVKDKNSANEITYALQVEGIRFMWENVIQSVKKVKSRDKGLGCILAHNMGLGKTFQ VITFLYTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLT KWRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEITYALQVEGIRFMWENVIQSVKKVKSRDKGL GCILAHNMGLGKTFQVITFLYTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVF MLEDVARVKRPDLLTKWRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEITYALQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d032801_circ_g.1

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