Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010232_circ_g.1 |
ID in PlantcircBase | zma_circ_002763 |
Alias | circ65 |
Organism | Zea mays |
Position | chr8: 105192310-105193115 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | KNIFE |
Parent gene | Zm00001d010232 |
Parent gene annotation |
Zea mays MADS29 |
Parent gene strand | + |
Alternative splicing | Zm00001d010232_circ_ag.1 |
Support reads | NA |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d010232_T008:3 Zm00001d010232_T004:3 Zm00001d010232_T001:5 Zm00001d010232_T006:3 Zm00001d010232_T003:5 Zm00001d010232_T007:2 Zm00001d010232_T005:4 Zm00001d010232_T002:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.064515405 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |