Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G10940_circ_g.13 |
ID in PlantcircBase | ath_circ_013149 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 4311676-4311840 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder |
Parent gene | AT2G10940 |
Parent gene annotation |
At2g10940/F15K19.1 |
Parent gene strand | - |
Alternative splicing | AT2G10940_circ_g.1 AT2G10940_circ_g.2 AT2G10940_circ_g.3 AT2G10940_circ_g.4 AT2G10940_circ_g.5 AT2G10940_circ_g.6 AT2G10940_circ_g.7 AT2G10940_circ_g.8 AT2G10940_circ_g.9 AT2G10940_circ_g.10 AT2G10940_circ_g.11 AT2G10940_circ_g.12 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT2G10940.1:1 AT2G10940.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.379010325 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |