Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d014232_circ_g.1 |
ID in PlantcircBase | zma_circ_001941 |
Alias | circ2088 |
Organism | Zea mays |
Position | chr5: 37309798-37311307 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d014232 |
Parent gene annotation |
F-box/LRR-repeat protein 15 |
Parent gene strand | - |
Alternative splicing | Zm00001d014232_circ_g.2 |
Support reads | 10 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d014232_T009:3 Zm00001d014232_T006:3 Zm00001d014232_T029:3 Zm00001d014232_T016:3 Zm00001d014232_T023:3 Zm00001d014232_T031:3 Zm00001d014232_T012:3 Zm00001d014232_T036:3 Zm00001d014232_T035:3 Zm00001d014232_T025:3 Zm00001d014232_T005:3 Zm00001d014232_T003:3 Zm00001d014232_T010:3 Zm00001d014232_T021:3 Zm00001d014232_T019:3 Zm00001d014232_T015:3 Zm00001d014232_T001:3 Zm00001d014232_T004:3 Zm00001d014232_T030:3 Zm00001d014232_T017:3 Zm00001d014232_T028:3 Zm00001d014232_T027:3 Zm00001d014232_T007:3 Zm00001d014232_T008:3 Zm00001d014232_T011:3 Zm00001d014232_T013:3 Zm00001d014232_T002:3 Zm00001d014232_T024:3 Zm00001d014232_T014:3 Zm00001d014232_T022:3 Zm00001d014232_T020:3 Zm00001d014232_T018:3 Zm00001d014232_T026:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.02468016 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |