Plant Circular RNA Database

Detail information of Os05g0559900_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os05g0559900_circ_g.6
					
						ID in PlantcircBase
						osa_circ_028914
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 27873113-27876448  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os05g0559900						
					
						Parent gene annotation
						
							tRNA-binding arm domain containing protein. (Os05t0559900-01);Si
milar to SKIP interacting protein 25. (Os05t0559900-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os05g0559900_circ_g.7 Os05g0559900_circ_g.8 Os05g0559900_circ_g.9 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0559900-01:6

General Information
CircRNA Name	Os05g0559900_circ_g.6
ID in PlantcircBase	osa_circ_028914
Alias	NA
Organism	Oryza sativa
Position	chr5: 27873113-27876448 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os05g0559900
Parent gene annotation	tRNA-binding arm domain containing protein. (Os05t0559900-01);Si milar to SKIP interacting protein 25. (Os05t0559900-02)
Parent gene strand	-
Alternative splicing	Os05g0559900_circ_g.7 Os05g0559900_circ_g.8 Os05g0559900_circ_g.9
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0559900-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATGCTTCAGCAGAATCCTCCTCGCCATTATTTCCCATGAATGCCATGACAGGATTAAAGAACC
CTATTCTATCAGAGTTAGATGCATGTGATCCTGATCctggatctttgagttcagccgttgtttt
tcttcttcaagttcacgaacctgaaagaaaacaaaatggaagaaagtgaaattggtaaaatatt
taatttgc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1553
Transcript exons: 27873113-27873159,27873249-27873311,27873766-27873880,27
874282-27874356,27874551-27874622,27875268-27876448
CTGGATCTTTGAGTTCAGCCGTTGTTTTTCTTCTTCAAGTTCACGAACCTGTGCCCTAAGTTTC
CGCATAGTAGCTTCTTGAGCAGCTTGTTTTTTTGATAGCTCTTCACCTTCCGCCATGACCTGAC
TGATAATTTCATCCTTTTCTTTCAAAAGAGCAGCTGCATCACTTTTTTTATTTTGCTCTCTCCT
TAATGTATCCCGTTCTTTGGTCAAGGCATACACCTTCCTTTCAAGAGTTGCTACTCTCTGGTGA
TATTCATCTTTAAGTGCATCCATTTCGGCTTCAGCTGACTTGCTCTTAAGATCATCAATTGTTG
ATTTCAGTTGTTCATTCTCATTCATCAGTCTTGCAATTTCATCAGCTTTGGACTGGGATTGTCT
TGCAGCACCTTGCAATGCAGCTTCCATCATCTTCATTTCACGTCTTAATTTCTCAAGTTCAGCG
ACAGCACCGACAGATTCCAGATGATTGCTAGTTGTAACAGAGCCCTGGATATTTTCTTCTTTTC
TCAAATCATTTGAATTGGAACCAACCTCTACCAGTCCAACAGGCACATCTGCAGAAGTGGGCAC
CGACTCATTTTGCGAGTTTGAATCATTGCTCACAATTATGGACATTGAGCTAAGGTCTTCAAGC
TGCACCATTGTATTCTCCTCCCTTTCAACAACAGTTGCTACCTGTGCTTCTGTTCGATTAGCTT
CTTCATCATTTTCAGCAGCATTAGTATGCTCATCATGTTCTATGACTTCCACATGACTAGCTTG
GTCAACGGTGTCAGTATTCTCATGTGAACTGCTTATTTCATTTCGATCATCAGCTCCTTTAACA
ATTTTCACAGCTTCATTTACATCATCTGAACTGGCTAGAATGGAATCTAGTGGTTGTGATTGTA
TGGCATTTTTATCATCTATGTTTTCCGTTCCAGCATGAAGGTATTCAGTTGTTCCCGTGTTACC
TGATTGATCTAATTCAGTAGGTGAAGAAGGCTTTGTACCATCAGGTATGCCTCTGTCAGATTCT
CCAATCTGACTTTGTGGCGCTTCATCATTAGGACCAGAATATTTTGTCTCTTGATGATCCTGGT
TTCCCGTCTCAATTGTATTACCCGTCTCAGTGGATCCACTGTTTTCTTCTGCTGTTGATGGATC
TGTGGGAGATTGTGGTGCTTCTGAATCCCCTTTATATGTGGGTGATTCAGTAGAATGACTAGGC
TTTTCTTCTGTTGCTGAAAGTGATTTTGGAGTTTTTGGTGTTGCTAGTTGCTCAGAAACCTCAG
CCTTGGATACAGGTGGCTCAGTTGAGCTGATAAGAGTCTCTCCTTGTTCAGAAGGCTTTGGAGA
TTGTGTTGATTCCGATTCTTCAGAAGCATCTACCTTGGATGTAGGCGCCTCTGTGGAGGCACTT
TGGCTCTGTTCTGCGGTTGTACTTTTTGGAGGTTGCTGCTTTTCTGATGCTTCAGCAGAATCCT
CCTCGCCATTATTTCCCATGAATGCCATGACAGGATTAAAGAACCCTATTCTATCAGAGTTAGA
TGCATGTGATCCTGATC
						
					

						Genomic sequence
						
							CTGGATCTTTGAGTTCAGCCGTTGTTTTTCTTCTTCAAGTTCACGAACCTGAAAGAAAACAAAA
TGGAAGAAAGTGAAATTGGTAAAATATTTAATTTGCACAAAATATGCTTAATGATAAGAGTTGC
AGTCCATGCCTGTGCCCTAAGTTTCCGCATAGTAGCTTCTTGAGCAGCTTGTTTTTTTGATAGC
TCTTCACCTGTTCATTGTAAAAAAATTGTTGATGCCAAATAAATGCCTCAAAACCTACTAAACA
TAAAAATGAAGGGGGCAAAAAATCAAATGGGCTCTAAAGTGTAAAGCTGGATAAAAGGGGCATA
AGAAGAAACATTAGCAAACCTATATAAATTCCAGGCCCTTTTCACAGAGAAATGTCTATGCCTA
TTTGCCTACCAATGGCAACCAGAGTCAACCTTACTGGTGAAGCACTACGATTATCCATGTCCAT
AGTTCTAATGTTGCTAATATGTGCTTGTGTGATGTAATCATGATGATTGTTATGAACAGAGGGT
ATTCGGCACAGTGCAATATATTTGTGGATCAACACTTCAAACTGTCTCAACATTACAACGGAAC
GAACATTGTGTATTGCAAATTTAACATTTATACGCAATCATAATAGAAGAGACAAAGAAAATGT
TGGTTCATTATACCTTCCGCCATGACCTGACTGATAATTTCATCCTTTTCTTTCAAAAGAGCAG
CTGCATCACTTTTTTTATTTTGCTCTCTCCTTAATGTATCCCGTTCTTTGGTCAAGGCATACAC
CTATAAACATTGAAGCATGCAAATATAAAACATATCAGCGATAAGAATAATCTTATTTTAGATG
CACTAGGTACCAAGAAAGAATGTGGTTAGCCTGTATTTAAAAAATAAATACATCATGCTTTAAT
CCAAACTATTAGAATTAAGTATCGAATAAATAAAACCGACTTTAGATAAATACATGAATATGTA
AGGTGCATCCAACAAGTAAAATAGTTTATCAATTAATATGGTAATAACTTTTTGTGGTGAAAAT
AGCATCCTGCTACTTTGAAAAATAAACAATTTACTACTTTGACTGCAGGAACTAGGCAGTGCCA
TTTAAGAACTTCACCAGAGTATAGTCTTAGCATAATTATGTCTATCGGACTACTGTCTTAATAA
GTGATAACGTGTCTCACCTTCCTTTCAAGAGTTGCTACTCTCTGGTGATATTCATCTTTAAGTG
CATCCATTTCGGCTTCAGCTGACTTGCTCTGTGCCATGTCAAAACAAAACAATCCAAGTTCATC
ACATGCTTATAGCACTACTGAGTAACTTAGGATAATTGTATAATATTCATGTCATTCAGTTTCA
TACAGATTAACTAAAACCTCCAGCAATTGCTAAATATAACATCTTAAATACCTTTTTAGAGAAG
GAAAAACACAGAGTCTGCTATCAAGCATACCTTAAGATCATCAATTGTTGATTTCAGTTGTTCA
TTCTCATTCATCAGTCTTGCAATTTCATCAGCTTTGGACTGCAGGAAGAAGTGTTGTGAGACAA
GTGAAGGGCCCAGGTATGTATGTTGCGCAGAAATGATAGAATATGGAAGTAAAAGATGCACTTA
GTTGTAAAAACCTCTGACTGTATGCTGAATACATATGAGCATCATATACTCATGGAATTATATT
TGTTTCCTCATATAAATCAGGCAAATATGAAAGACAAGAGTTTTAAATAGCTGTCCATGCTTTA
ATGCATTCCAAGAATATAAGACAAAAATAGGAATGCTCACTGAGCATGTGGAAAATATTAGATG
AACGTGTCTCTGTTTATTTCTCTTTTTCAGTAAAAATGCTGCACCAAAAATAGAAGAATGAAAC
TTGAATGCAATTAATTGAGCAGATAGATCCAGTCTAGCAGCAGTTCATTTCCTAGAAAAACATT
GTGCTACTATCAAAATCAAATCAGATATTGTTCATCAACTAGCGTTCTGCAGGGTTAGAGCATA
TTTCCATAAGTCACAGAAACATTTATGGATCTTCATTTATAGAACAAATATGCATTCACAAACT
AAAGGAAGTTTTGTTACAAGTGGAAAATCATGTGGTAGTTTTCTCAACATACAGTTTCGACCGT
ACAAGCATAACTGGGTTGCTAGTAGACCACGTGGAAATGATACCTGGGATTGTCTTGCAGCACC
TTGCAATGCAGCTTCCATCATCTTCATTTCACGTCTTAATTTCTCAAGTTCAGCGACAGCACCG
ACAGATTCCAGATGATTGCTAGTTGTAACAGAGCCCTGGATATTTTCTTCTTTTCTCAAATCAT
TTGAATTGGAACCAACCTCTACCAGTCCAACAGGCACATCTGCAGAAGTGGGCACCGACTCATT
TTGCGAGTTTGAATCATTGCTCACAATTATGGACATTGAGCTAAGGTCTTCAAGCTGCACCATT
GTATTCTCCTCCCTTTCAACAACAGTTGCTACCTGTGCTTCTGTTCGATTAGCTTCTTCATCAT
TTTCAGCAGCATTAGTATGCTCATCATGTTCTATGACTTCCACATGACTAGCTTGGTCAACGGT
GTCAGTATTCTCATGTGAACTGCTTATTTCATTTCGATCATCAGCTCCTTTAACAATTTTCACA
GCTTCATTTACATCATCTGAACTGGCTAGAATGGAATCTAGTGGTTGTGATTGTATGGCATTTT
TATCATCTATGTTTTCCGTTCCAGCATGAAGGTATTCAGTTGTTCCCGTGTTACCTGATTGATC
TAATTCAGTAGGTGAAGAAGGCTTTGTACCATCAGGTATGCCTCTGTCAGATTCTCCAATCTGA
CTTTGTGGCGCTTCATCATTAGGACCAGAATATTTTGTCTCTTGATGATCCTGGTTTCCCGTCT
CAATTGTATTACCCGTCTCAGTGGATCCACTGTTTTCTTCTGCTGTTGATGGATCTGTGGGAGA
TTGTGGTGCTTCTGAATCCCCTTTATATGTGGGTGATTCAGTAGAATGACTAGGCTTTTCTTCT
GTTGCTGAAAGTGATTTTGGAGTTTTTGGTGTTGCTAGTTGCTCAGAAACCTCAGCCTTGGATA
CAGGTGGCTCAGTTGAGCTGATAAGAGTCTCTCCTTGTTCAGAAGGCTTTGGAGATTGTGTTGA
TTCCGATTCTTCAGAAGCATCTACCTTGGATGTAGGCGCCTCTGTGGAGGCACTTTGGCTCTGT
TCTGCGGTTGTACTTTTTGGAGGTTGCTGCTTTTCTGATGCTTCAGCAGAATCCTCCTCGCCAT
TATTTCCCATGAATGCCATGACAGGATTAAAGAACCCTATTCTATCAGAGTTAGATGCATGTGA
TCCTGATC
						
					

			
		

Sequences
Splice junction sequence	GATGCTTCAGCAGAATCCTCCTCGCCATTATTTCCCATGAATGCCATGACAGGATTAAAGAACC CTATTCTATCAGAGTTAGATGCATGTGATCCTGATCctggatctttgagttcagccgttgtttt tcttcttcaagttcacgaacctgaaagaaaacaaaatggaagaaagtgaaattggtaaaatatt taatttgc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1553 Transcript exons: 27873113-27873159,27873249-27873311,27873766-27873880,27 874282-27874356,27874551-27874622,27875268-27876448 CTGGATCTTTGAGTTCAGCCGTTGTTTTTCTTCTTCAAGTTCACGAACCTGTGCCCTAAGTTTC CGCATAGTAGCTTCTTGAGCAGCTTGTTTTTTTGATAGCTCTTCACCTTCCGCCATGACCTGAC TGATAATTTCATCCTTTTCTTTCAAAAGAGCAGCTGCATCACTTTTTTTATTTTGCTCTCTCCT TAATGTATCCCGTTCTTTGGTCAAGGCATACACCTTCCTTTCAAGAGTTGCTACTCTCTGGTGA TATTCATCTTTAAGTGCATCCATTTCGGCTTCAGCTGACTTGCTCTTAAGATCATCAATTGTTG ATTTCAGTTGTTCATTCTCATTCATCAGTCTTGCAATTTCATCAGCTTTGGACTGGGATTGTCT TGCAGCACCTTGCAATGCAGCTTCCATCATCTTCATTTCACGTCTTAATTTCTCAAGTTCAGCG ACAGCACCGACAGATTCCAGATGATTGCTAGTTGTAACAGAGCCCTGGATATTTTCTTCTTTTC TCAAATCATTTGAATTGGAACCAACCTCTACCAGTCCAACAGGCACATCTGCAGAAGTGGGCAC CGACTCATTTTGCGAGTTTGAATCATTGCTCACAATTATGGACATTGAGCTAAGGTCTTCAAGC TGCACCATTGTATTCTCCTCCCTTTCAACAACAGTTGCTACCTGTGCTTCTGTTCGATTAGCTT CTTCATCATTTTCAGCAGCATTAGTATGCTCATCATGTTCTATGACTTCCACATGACTAGCTTG GTCAACGGTGTCAGTATTCTCATGTGAACTGCTTATTTCATTTCGATCATCAGCTCCTTTAACA ATTTTCACAGCTTCATTTACATCATCTGAACTGGCTAGAATGGAATCTAGTGGTTGTGATTGTA TGGCATTTTTATCATCTATGTTTTCCGTTCCAGCATGAAGGTATTCAGTTGTTCCCGTGTTACC TGATTGATCTAATTCAGTAGGTGAAGAAGGCTTTGTACCATCAGGTATGCCTCTGTCAGATTCT CCAATCTGACTTTGTGGCGCTTCATCATTAGGACCAGAATATTTTGTCTCTTGATGATCCTGGT TTCCCGTCTCAATTGTATTACCCGTCTCAGTGGATCCACTGTTTTCTTCTGCTGTTGATGGATC TGTGGGAGATTGTGGTGCTTCTGAATCCCCTTTATATGTGGGTGATTCAGTAGAATGACTAGGC TTTTCTTCTGTTGCTGAAAGTGATTTTGGAGTTTTTGGTGTTGCTAGTTGCTCAGAAACCTCAG CCTTGGATACAGGTGGCTCAGTTGAGCTGATAAGAGTCTCTCCTTGTTCAGAAGGCTTTGGAGA TTGTGTTGATTCCGATTCTTCAGAAGCATCTACCTTGGATGTAGGCGCCTCTGTGGAGGCACTT TGGCTCTGTTCTGCGGTTGTACTTTTTGGAGGTTGCTGCTTTTCTGATGCTTCAGCAGAATCCT CCTCGCCATTATTTCCCATGAATGCCATGACAGGATTAAAGAACCCTATTCTATCAGAGTTAGA TGCATGTGATCCTGATC
Genomic sequence	CTGGATCTTTGAGTTCAGCCGTTGTTTTTCTTCTTCAAGTTCACGAACCTGAAAGAAAACAAAA TGGAAGAAAGTGAAATTGGTAAAATATTTAATTTGCACAAAATATGCTTAATGATAAGAGTTGC AGTCCATGCCTGTGCCCTAAGTTTCCGCATAGTAGCTTCTTGAGCAGCTTGTTTTTTTGATAGC TCTTCACCTGTTCATTGTAAAAAAATTGTTGATGCCAAATAAATGCCTCAAAACCTACTAAACA TAAAAATGAAGGGGGCAAAAAATCAAATGGGCTCTAAAGTGTAAAGCTGGATAAAAGGGGCATA AGAAGAAACATTAGCAAACCTATATAAATTCCAGGCCCTTTTCACAGAGAAATGTCTATGCCTA TTTGCCTACCAATGGCAACCAGAGTCAACCTTACTGGTGAAGCACTACGATTATCCATGTCCAT AGTTCTAATGTTGCTAATATGTGCTTGTGTGATGTAATCATGATGATTGTTATGAACAGAGGGT ATTCGGCACAGTGCAATATATTTGTGGATCAACACTTCAAACTGTCTCAACATTACAACGGAAC GAACATTGTGTATTGCAAATTTAACATTTATACGCAATCATAATAGAAGAGACAAAGAAAATGT TGGTTCATTATACCTTCCGCCATGACCTGACTGATAATTTCATCCTTTTCTTTCAAAAGAGCAG CTGCATCACTTTTTTTATTTTGCTCTCTCCTTAATGTATCCCGTTCTTTGGTCAAGGCATACAC CTATAAACATTGAAGCATGCAAATATAAAACATATCAGCGATAAGAATAATCTTATTTTAGATG CACTAGGTACCAAGAAAGAATGTGGTTAGCCTGTATTTAAAAAATAAATACATCATGCTTTAAT CCAAACTATTAGAATTAAGTATCGAATAAATAAAACCGACTTTAGATAAATACATGAATATGTA AGGTGCATCCAACAAGTAAAATAGTTTATCAATTAATATGGTAATAACTTTTTGTGGTGAAAAT AGCATCCTGCTACTTTGAAAAATAAACAATTTACTACTTTGACTGCAGGAACTAGGCAGTGCCA TTTAAGAACTTCACCAGAGTATAGTCTTAGCATAATTATGTCTATCGGACTACTGTCTTAATAA GTGATAACGTGTCTCACCTTCCTTTCAAGAGTTGCTACTCTCTGGTGATATTCATCTTTAAGTG CATCCATTTCGGCTTCAGCTGACTTGCTCTGTGCCATGTCAAAACAAAACAATCCAAGTTCATC ACATGCTTATAGCACTACTGAGTAACTTAGGATAATTGTATAATATTCATGTCATTCAGTTTCA TACAGATTAACTAAAACCTCCAGCAATTGCTAAATATAACATCTTAAATACCTTTTTAGAGAAG GAAAAACACAGAGTCTGCTATCAAGCATACCTTAAGATCATCAATTGTTGATTTCAGTTGTTCA TTCTCATTCATCAGTCTTGCAATTTCATCAGCTTTGGACTGCAGGAAGAAGTGTTGTGAGACAA GTGAAGGGCCCAGGTATGTATGTTGCGCAGAAATGATAGAATATGGAAGTAAAAGATGCACTTA GTTGTAAAAACCTCTGACTGTATGCTGAATACATATGAGCATCATATACTCATGGAATTATATT TGTTTCCTCATATAAATCAGGCAAATATGAAAGACAAGAGTTTTAAATAGCTGTCCATGCTTTA ATGCATTCCAAGAATATAAGACAAAAATAGGAATGCTCACTGAGCATGTGGAAAATATTAGATG AACGTGTCTCTGTTTATTTCTCTTTTTCAGTAAAAATGCTGCACCAAAAATAGAAGAATGAAAC TTGAATGCAATTAATTGAGCAGATAGATCCAGTCTAGCAGCAGTTCATTTCCTAGAAAAACATT GTGCTACTATCAAAATCAAATCAGATATTGTTCATCAACTAGCGTTCTGCAGGGTTAGAGCATA TTTCCATAAGTCACAGAAACATTTATGGATCTTCATTTATAGAACAAATATGCATTCACAAACT AAAGGAAGTTTTGTTACAAGTGGAAAATCATGTGGTAGTTTTCTCAACATACAGTTTCGACCGT ACAAGCATAACTGGGTTGCTAGTAGACCACGTGGAAATGATACCTGGGATTGTCTTGCAGCACC TTGCAATGCAGCTTCCATCATCTTCATTTCACGTCTTAATTTCTCAAGTTCAGCGACAGCACCG ACAGATTCCAGATGATTGCTAGTTGTAACAGAGCCCTGGATATTTTCTTCTTTTCTCAAATCAT TTGAATTGGAACCAACCTCTACCAGTCCAACAGGCACATCTGCAGAAGTGGGCACCGACTCATT TTGCGAGTTTGAATCATTGCTCACAATTATGGACATTGAGCTAAGGTCTTCAAGCTGCACCATT GTATTCTCCTCCCTTTCAACAACAGTTGCTACCTGTGCTTCTGTTCGATTAGCTTCTTCATCAT TTTCAGCAGCATTAGTATGCTCATCATGTTCTATGACTTCCACATGACTAGCTTGGTCAACGGT GTCAGTATTCTCATGTGAACTGCTTATTTCATTTCGATCATCAGCTCCTTTAACAATTTTCACA GCTTCATTTACATCATCTGAACTGGCTAGAATGGAATCTAGTGGTTGTGATTGTATGGCATTTT TATCATCTATGTTTTCCGTTCCAGCATGAAGGTATTCAGTTGTTCCCGTGTTACCTGATTGATC TAATTCAGTAGGTGAAGAAGGCTTTGTACCATCAGGTATGCCTCTGTCAGATTCTCCAATCTGA CTTTGTGGCGCTTCATCATTAGGACCAGAATATTTTGTCTCTTGATGATCCTGGTTTCCCGTCT CAATTGTATTACCCGTCTCAGTGGATCCACTGTTTTCTTCTGCTGTTGATGGATCTGTGGGAGA TTGTGGTGCTTCTGAATCCCCTTTATATGTGGGTGATTCAGTAGAATGACTAGGCTTTTCTTCT GTTGCTGAAAGTGATTTTGGAGTTTTTGGTGTTGCTAGTTGCTCAGAAACCTCAGCCTTGGATA CAGGTGGCTCAGTTGAGCTGATAAGAGTCTCTCCTTGTTCAGAAGGCTTTGGAGATTGTGTTGA TTCCGATTCTTCAGAAGCATCTACCTTGGATGTAGGCGCCTCTGTGGAGGCACTTTGGCTCTGT TCTGCGGTTGTACTTTTTGGAGGTTGCTGCTTTTCTGATGCTTCAGCAGAATCCTCCTCGCCAT TATTTCCCATGAATGCCATGACAGGATTAAAGAACCCTATTCTATCAGAGTTAGATGCATGTGA TCCTGATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.222957047

Conservation Information
Conserved circRNAs	NA
PMCS	0.222957047

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							27876386-27873257(+)
27876397-27876415(-)
						
						Potential amino acid sequence
						
							MNAMTGLKNPILSELDACDPDPGSLSSAVVFLLQVHEPVP*(+)
MAFMGNNGEEDSAEASEKQQPPKSTTAEQSQSASTEAPTSKVDASEESESTQSPKPSEQGETLI
SSTEPPVSKAEVSEQLATPKTPKSLSATEEKPSHSTESPTYKGDSEAPQSPTDPSTAEENSGST
ETGNTIETGNQDHQETKYSGPNDEAPQSQIGESDRGIPDGTKPSSPTELDQSGNTGTTEYLHAG
TENIDDKNAIQSQPLDSILASSDDVNEAVKIVKGADDRNEISSSHENTDTVDQASHVEVIEHDE
HTNAAENDEEANRTEAQVATVVEREENTMVQLEDLSSMSIIVSNDSNSQNESVPTSADVPVGLV
EVGSNSNDLRKEENIQGSVTTSNHLESVGAVAELEKLRREMKMMEAALQGAARQSQSKADEIAR
LMNENEQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAA
LLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRELEEEKQRLNSKIQDQDHMHLTLIE*
(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	27876386-27873257(+) 27876397-27876415(-)
Potential amino acid sequence	MNAMTGLKNPILSELDACDPDPGSLSSAVVFLLQVHEPVP(+) MAFMGNNGEEDSAEASEKQQPPKSTTAEQSQSASTEAPTSKVDASEESESTQSPKPSEQGETLI SSTEPPVSKAEVSEQLATPKTPKSLSATEEKPSHSTESPTYKGDSEAPQSPTDPSTAEENSGST ETGNTIETGNQDHQETKYSGPNDEAPQSQIGESDRGIPDGTKPSSPTELDQSGNTGTTEYLHAG TENIDDKNAIQSQPLDSILASSDDVNEAVKIVKGADDRNEISSSHENTDTVDQASHVEVIEHDE HTNAAENDEEANRTEAQVATVVEREENTMVQLEDLSSMSIIVSNDSNSQNESVPTSADVPVGLV EVGSNSNDLRKEENIQGSVTTSNHLESVGAVAELEKLRREMKMMEAALQGAARQSQSKADEIAR LMNENEQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAA LLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRELEEEKQRLNSKIQDQDHMHLTLIE (-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os05g0559900_circ_g.6

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