Plant Circular RNA Database

Detail information of Zm00001d033502_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d033502_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006877
					
						Alias
						zma_circ_0000500, GRMZM2G093855_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 264625356-264629077  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d033502						
					
						Parent gene annotation
						
							Rhomboid-like protein 15
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d033502_circ_g.2 Zm00001d033502_circ_g.3 Zm00001d033502_circ_g.4 Zm00001d033502_circ_g.5 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d033502_T001:7
Zm00001d033502_T002:7
Zm00001d033502_T007:6
Zm00001d033502_T003:7
Zm00001d033502_T004:7
Zm00001d033502_T005:7
Zm00001d033502_T006:6
Zm00001d033502_T008:6

General Information
CircRNA Name	Zm00001d033502_circ_g.1
ID in PlantcircBase	zma_circ_006877
Alias	zma_circ_0000500, GRMZM2G093855_C1
Organism	Zea mays
Position	chr1: 264625356-264629077 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d033502
Parent gene annotation	Rhomboid-like protein 15
Parent gene strand	+
Alternative splicing	Zm00001d033502_circ_g.2 Zm00001d033502_circ_g.3 Zm00001d033502_circ_g.4 Zm00001d033502_circ_g.5
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d033502_T001:7 Zm00001d033502_T002:7 Zm00001d033502_T007:6 Zm00001d033502_T003:7 Zm00001d033502_T004:7 Zm00001d033502_T005:7 Zm00001d033502_T006:6 Zm00001d033502_T008:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTCTGTAGGAACTGAACCCACTGCAAGGGAGGCAAGTGCGCATTTGCATGCTAGGTTGTTGGA
TAACACAACTCCAAGTGACCCACTAACGAATACACAtatacaggttctacacatctgttctctt
tcatggttctttgcttcatgtgctattcaacatgcttgccttggtacccttgggcactgagttg
gagagaat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 814
Transcript exons: 264625356-264625659,264627201-264627233,264627346-264627
437,264627533-264627606,264627714-264627808,264627879-26
4627951,264628935-264629077
TATACAGGTTCTACACATCTGTTCTCTTTCATGGTTCTTTGCTTCATGTGCTATTCAACATGCT
TGCCTTGGTACCCTTGGGCACTGAGTTGGAGAGAATCATGGGATCAGTCCGTCTCTTATTCTTG
ATGCTCCTTCTTGCAACAACAAATGCAATTCTCCATCTCACAATTGCTTTCTTGGTGGCTTACA
ATCCTCTGTATCACGTTCCAAATCTTGTGAATGAATGCTCCATTGGCTTTTCTGGAGTTATATT
CTCAATGATTGTCATTGAGACAAGTCTGAGTGGTGTGCAATCACGAAGTGTCTTCGGCCTCTTC
AATGTTCCTGCAAAATGGTACGCATGGATTTTGCTAGTGCTATTTCAGTTTCTCGCAAGCAATG
TTTCATTGCTGGGACACCTTTGTGGCATCTTGTCAGGATTTGCATACACTTATGGGCTGTTCAA
CTACTTGCTTCCTGGGCCATCATTTTATTCTAAAATCGAAGGCTTGTCAGCACTATCTGTTTGT
GTGAGGCGTCCTGGCTTTATTATGTGTACTGGAGGCACTACTTATGGTCAGCTTCCTACATACT
CTAACACGTCTGCTGCACCAAGTGCTCTCATAAATGGAAATTTCTTGAGAAATATATCTTCATG
GATGCCTAGCAGACACACATCAACTGCTCAGGAAGGAGAAGACCCAAGGTTTCCTGGGAGAGCA
CGAACACTTGGTTCTGTAGGAACTGAACCCACTGCAAGGGAGGCAAGTGCGCATTTGCATGCTA
GGTTGTTGGATAACACAACTCCAAGTGACCCACTAACGAATACACA
						
					

						Genomic sequence
						
							TATACAGGTTCTACACATCTGTTCTCTTTCATGGTTCTTTGCTTCATGTGCTATTCAACATGCT
TGCCTTGGTACCCTTGGGCACTGAGTTGGAGAGAATCATGGGATCAGTCCGTCTCTTATTCTTG
ATGCTCCTTCTTGCAACAACAAATGCAATTCTCCATCTCACAATTGCTTTCTTGGTGGCTTACA
ATCCTCTGTATCACGTTCCAAATCTTGTGAATGAATGCTCCATTGGCTTTTCTGGAGTTATATT
CTCAATGATTGTCATTGAGACAAGTCTGAGTGGTGTGCAATCACGAAGGTGCGTTTCTTTCTAT
GGTGATCATATTTGATGATCTACACAAGTTTTTAGCAAATATACGAATGTCTTACAAAAACCTA
ACATAAACATTTTATGTAAAAGTAAAATTTTGTCTACTCATTGTCCGTGCTGATTGCCGAGGGA
TGCCTAGGAATTTTGTCCATCTTTTGTGCATGCCGAATATATGATTCCATTGATTGTGAACTGT
ATAAAATGTTTGAATTTCTTGTTATATTGAATGGTTATACATTCAAATAGTCTATACACAGCTT
GAGTATTGTTTATTATTATTTTATCTATTCCAAGTGGTTACTGAAATACATTCACGCTATTATA
AGTGCACATATCTAGTGTGCAATTTCGTATGTGCTGAAGTTATGCAGTTATGGGACAATTTGGT
GGGTCTAGAGGAGATGAGAATCCAAGGAGGATTCTCCTAAATGTGACTACGAGAGCGAGCCATT
CAGAAAGTTTTCCATTTGACCTTGGTATCGATGCATGCTGGCCCTGTAATTCATGTGGAAAGTT
ATCATGACTACCTATGTTTTCTGGTCGCTCGACCAGCTAGTCGAACTGGGGGACCGACCAGCGA
CTAATCTCGATTAGTCGTCGACTAGGTCCGACTAATCGAGCTCTGATCGACCTGGTCGTTTACT
GGTCGTCCTGTTCATCCAGGAGACCAGGACCTATGTATATACTATATAATATATACTATTATAC
TATATAGTAAATAATTATATAACTATATAGTATATATGAACTTCATATACTATATTATGAAGGA
TAGGGTAAACATGACATGAATTCAGCAATACTGAAAAGTGAAAACAGCAGAGGAACACTTCTAG
TTATTAATACTACAAGTCCCAGATACCAGTACCACACAACACACATTAATACTACAAGTCCAAA
AAAAATCTAGGTCCTAAACCTAGTCGCCCAGAACCGGCTAATCGAGCGACTAATCGGCCCTAAT
CGTCGACTAGTCGGACGACCAGGGCGACCAGGTACTCTAGTCGAGTCGGCTGCCTAATCGAGCT
CTGCTAACCGACTAGCCCGACTAATCGCGACTAATCGCGATTAGTCGGACGACTTGAAAACACA
GATGACTACACCCGAACATGAGTTTGCATTAGATATCTTTCCCACAATAATTTACAACAAGACC
TTTTAGTTCTTGTTATTTTCTAACCTGTATGCCAACACTCTCACGGTGCGACTGGTCAGCCGGA
CACGCCAAAGAAGCGGTCTGCTGGGCCAGCCCGGGTTCGAGTCGCGGCATCAACTTCTTAAGTG
AAAAAGTCAGGGGGCGTCTCTCCCCTTGGTCAGAAAATTTTTTTCTAACCTGTATGCCCGATAT
GTAGTGGCAAGAGCTGATAATGCCAACAGCAAAAAAAAAAAATCTCGATTTAGGATGATTTTTC
CTTAATTGTATGCCCCAAGAATTTCTATTCTTTTTTCAACTTCCTAAATGATATTTGTTGTGTT
TCAATTTTGTGATATTAATTGCATATAATTTGACACCCTTTCTCGTTTTCCAGTGTCTTCGGCC
TCTTCAATGTTCCTGCAAAATGGTACTCTTTTTTTTTTGCATGTGTTGATGGTATTCAGTATTC
ACTTCTGGTTACTAGATGATATCGGAGACCCATATCTTATGTAAAAAAACTTAAATTTGTACAA
TGCCAGGTACGCATGGATTTTGCTAGTGCTATTTCAGTTTCTCGCAAGCAATGTTTCATTGCTG
GGACACCTTTGTGGCATCTTGTCAGGATTTGCATGTTTGTCCTTTATATCCTTCTTATTTGTTA
ATTCTTCACGAGCTATATTTTATTTTTAATCATATTCCTTGCTAAGCCTATTTATTTGGCACCA
GACACTTATGGGCTGTTCAACTACTTGCTTCCTGGGCCATCATTTTATTCTAAAATCGAAGGCT
TGTCAGCACTAGTAAGTTTTGCTTAGATGGTTTAAGTTATCCTGACCAATGACCATATCATCTT
CTGTATGAGATGTTTCTTATATCTGTATTTATTGTCTGATGTATTGGATGTCAGTCTGTTTGTG
TGAGGCGTCCTGGCTTTATTATGTGTACTGGAGGCACTACTTATGGTCAGCTTCCTACATACTC
TAACACGTCTGCTGCACCAAGGTACTGTTTTCAGATTCATTCCTTTTATGTAATGCTCACAGAA
GTAACATGTTATTCGTTTAATTTACAGTGCTCTCATAAATGGAAATTTCTTGAGAAATATATCT
TCATGGATGCCTAGCAGACACACATCAACTGCTCAGGTATTGAAAAATCGACAATGCCATATAC
TCAAATATGCTCATACTTGCAATGGTTTTCTGTTGGTGATGTTAATCATCTGCTTAGGGTTTAA
GCAACCATTGTAGAAATTTACTGTAACCCAAGGCTTTTGGGGCTTCTCCAATCTGATTTTATTT
TTCACCTATTCTGTGGTGGCCTAAGTATCAAGCCATGGCTTATGGTAGGAGTTCTAGAATGTGT
GCTAAAAGTTTTGATCTACTGAGAAATCATTAGATATATCTCTCTGTTTCACATATATTTTCCT
GGAAGCTGTTTGTTAAAGCTTCTGAGGAGCCTGAATCAAAACTGAATCCGTCCATGGAAGAATA
CAACATATTAGCATTTTTTACGTGACCTTTTTGCAATTTGCCAATTTGATCATCCAACTAATAG
AAACATATTCCAAACATTCCTCTAAGTAAAACAAAAGGTTGTCCTTTGCTGGTATTTGCATTTA
AAAGAGCACTGCGCTTTTTTAACACCTTGCTGTTAGTTTTTTTTTAAAAGAAACCAAAAGCTTC
ATTAACAGAAAGCTATGTTGGACAGGTACACAGTAAAAGCTATGGCCTGCTAGGTTCCTGGTTA
TGGCAGTTAATTTCAAGATTAATACCACTTGATACATATTAGGTCACATATTGTTCTTCTGTGT
CGATTAATACATTACAAATTCATAAACTATCTTTCTGAAATATGTGTTACCTAACTATCTTGCT
TGGAGTTAAAAGTTTTGTTGTCATTAGCTAGTTACTTAAAGTATATCCCCTCCTTCCAAAAAGA
ATCTCATTCTAGTTTTCTCCTAAGTCAAACTATTTTTGTAGTGCACCTATTTGGTGTTATAAAT
GTTGATAATCTTCTTTATAAGCTCGGTCAAGCCTAAGATAGTTTGACTTGCCAAACTAAAGCCG
TATTCTTTTCGGAACAGGGGTAGTATGAGCTTATGAATCTGCTGATTTTTATCCTTCAGGAAGG
AGAAGACCCAAGGTTTCCTGGGAGAGCACGAACACTTGGTTCTGTAGGAACTGAACCCACTGCA
AGGGAGGCAAGTGCGCATTTGCATGCTAGGTTGTTGGATAACACAACTCCAAGTGACCCACTAA
CGAATACACA
						
					

			
		

Sequences
Splice junction sequence	GTTCTGTAGGAACTGAACCCACTGCAAGGGAGGCAAGTGCGCATTTGCATGCTAGGTTGTTGGA TAACACAACTCCAAGTGACCCACTAACGAATACACAtatacaggttctacacatctgttctctt tcatggttctttgcttcatgtgctattcaacatgcttgccttggtacccttgggcactgagttg gagagaat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 814 Transcript exons: 264625356-264625659,264627201-264627233,264627346-264627 437,264627533-264627606,264627714-264627808,264627879-26 4627951,264628935-264629077 TATACAGGTTCTACACATCTGTTCTCTTTCATGGTTCTTTGCTTCATGTGCTATTCAACATGCT TGCCTTGGTACCCTTGGGCACTGAGTTGGAGAGAATCATGGGATCAGTCCGTCTCTTATTCTTG ATGCTCCTTCTTGCAACAACAAATGCAATTCTCCATCTCACAATTGCTTTCTTGGTGGCTTACA ATCCTCTGTATCACGTTCCAAATCTTGTGAATGAATGCTCCATTGGCTTTTCTGGAGTTATATT CTCAATGATTGTCATTGAGACAAGTCTGAGTGGTGTGCAATCACGAAGTGTCTTCGGCCTCTTC AATGTTCCTGCAAAATGGTACGCATGGATTTTGCTAGTGCTATTTCAGTTTCTCGCAAGCAATG TTTCATTGCTGGGACACCTTTGTGGCATCTTGTCAGGATTTGCATACACTTATGGGCTGTTCAA CTACTTGCTTCCTGGGCCATCATTTTATTCTAAAATCGAAGGCTTGTCAGCACTATCTGTTTGT GTGAGGCGTCCTGGCTTTATTATGTGTACTGGAGGCACTACTTATGGTCAGCTTCCTACATACT CTAACACGTCTGCTGCACCAAGTGCTCTCATAAATGGAAATTTCTTGAGAAATATATCTTCATG GATGCCTAGCAGACACACATCAACTGCTCAGGAAGGAGAAGACCCAAGGTTTCCTGGGAGAGCA CGAACACTTGGTTCTGTAGGAACTGAACCCACTGCAAGGGAGGCAAGTGCGCATTTGCATGCTA GGTTGTTGGATAACACAACTCCAAGTGACCCACTAACGAATACACA
Genomic sequence	TATACAGGTTCTACACATCTGTTCTCTTTCATGGTTCTTTGCTTCATGTGCTATTCAACATGCT TGCCTTGGTACCCTTGGGCACTGAGTTGGAGAGAATCATGGGATCAGTCCGTCTCTTATTCTTG ATGCTCCTTCTTGCAACAACAAATGCAATTCTCCATCTCACAATTGCTTTCTTGGTGGCTTACA ATCCTCTGTATCACGTTCCAAATCTTGTGAATGAATGCTCCATTGGCTTTTCTGGAGTTATATT CTCAATGATTGTCATTGAGACAAGTCTGAGTGGTGTGCAATCACGAAGGTGCGTTTCTTTCTAT GGTGATCATATTTGATGATCTACACAAGTTTTTAGCAAATATACGAATGTCTTACAAAAACCTA ACATAAACATTTTATGTAAAAGTAAAATTTTGTCTACTCATTGTCCGTGCTGATTGCCGAGGGA TGCCTAGGAATTTTGTCCATCTTTTGTGCATGCCGAATATATGATTCCATTGATTGTGAACTGT ATAAAATGTTTGAATTTCTTGTTATATTGAATGGTTATACATTCAAATAGTCTATACACAGCTT GAGTATTGTTTATTATTATTTTATCTATTCCAAGTGGTTACTGAAATACATTCACGCTATTATA AGTGCACATATCTAGTGTGCAATTTCGTATGTGCTGAAGTTATGCAGTTATGGGACAATTTGGT GGGTCTAGAGGAGATGAGAATCCAAGGAGGATTCTCCTAAATGTGACTACGAGAGCGAGCCATT CAGAAAGTTTTCCATTTGACCTTGGTATCGATGCATGCTGGCCCTGTAATTCATGTGGAAAGTT ATCATGACTACCTATGTTTTCTGGTCGCTCGACCAGCTAGTCGAACTGGGGGACCGACCAGCGA CTAATCTCGATTAGTCGTCGACTAGGTCCGACTAATCGAGCTCTGATCGACCTGGTCGTTTACT GGTCGTCCTGTTCATCCAGGAGACCAGGACCTATGTATATACTATATAATATATACTATTATAC TATATAGTAAATAATTATATAACTATATAGTATATATGAACTTCATATACTATATTATGAAGGA TAGGGTAAACATGACATGAATTCAGCAATACTGAAAAGTGAAAACAGCAGAGGAACACTTCTAG TTATTAATACTACAAGTCCCAGATACCAGTACCACACAACACACATTAATACTACAAGTCCAAA AAAAATCTAGGTCCTAAACCTAGTCGCCCAGAACCGGCTAATCGAGCGACTAATCGGCCCTAAT CGTCGACTAGTCGGACGACCAGGGCGACCAGGTACTCTAGTCGAGTCGGCTGCCTAATCGAGCT CTGCTAACCGACTAGCCCGACTAATCGCGACTAATCGCGATTAGTCGGACGACTTGAAAACACA GATGACTACACCCGAACATGAGTTTGCATTAGATATCTTTCCCACAATAATTTACAACAAGACC TTTTAGTTCTTGTTATTTTCTAACCTGTATGCCAACACTCTCACGGTGCGACTGGTCAGCCGGA CACGCCAAAGAAGCGGTCTGCTGGGCCAGCCCGGGTTCGAGTCGCGGCATCAACTTCTTAAGTG AAAAAGTCAGGGGGCGTCTCTCCCCTTGGTCAGAAAATTTTTTTCTAACCTGTATGCCCGATAT GTAGTGGCAAGAGCTGATAATGCCAACAGCAAAAAAAAAAAATCTCGATTTAGGATGATTTTTC CTTAATTGTATGCCCCAAGAATTTCTATTCTTTTTTCAACTTCCTAAATGATATTTGTTGTGTT TCAATTTTGTGATATTAATTGCATATAATTTGACACCCTTTCTCGTTTTCCAGTGTCTTCGGCC TCTTCAATGTTCCTGCAAAATGGTACTCTTTTTTTTTTGCATGTGTTGATGGTATTCAGTATTC ACTTCTGGTTACTAGATGATATCGGAGACCCATATCTTATGTAAAAAAACTTAAATTTGTACAA TGCCAGGTACGCATGGATTTTGCTAGTGCTATTTCAGTTTCTCGCAAGCAATGTTTCATTGCTG GGACACCTTTGTGGCATCTTGTCAGGATTTGCATGTTTGTCCTTTATATCCTTCTTATTTGTTA ATTCTTCACGAGCTATATTTTATTTTTAATCATATTCCTTGCTAAGCCTATTTATTTGGCACCA GACACTTATGGGCTGTTCAACTACTTGCTTCCTGGGCCATCATTTTATTCTAAAATCGAAGGCT TGTCAGCACTAGTAAGTTTTGCTTAGATGGTTTAAGTTATCCTGACCAATGACCATATCATCTT CTGTATGAGATGTTTCTTATATCTGTATTTATTGTCTGATGTATTGGATGTCAGTCTGTTTGTG TGAGGCGTCCTGGCTTTATTATGTGTACTGGAGGCACTACTTATGGTCAGCTTCCTACATACTC TAACACGTCTGCTGCACCAAGGTACTGTTTTCAGATTCATTCCTTTTATGTAATGCTCACAGAA GTAACATGTTATTCGTTTAATTTACAGTGCTCTCATAAATGGAAATTTCTTGAGAAATATATCT TCATGGATGCCTAGCAGACACACATCAACTGCTCAGGTATTGAAAAATCGACAATGCCATATAC TCAAATATGCTCATACTTGCAATGGTTTTCTGTTGGTGATGTTAATCATCTGCTTAGGGTTTAA GCAACCATTGTAGAAATTTACTGTAACCCAAGGCTTTTGGGGCTTCTCCAATCTGATTTTATTT TTCACCTATTCTGTGGTGGCCTAAGTATCAAGCCATGGCTTATGGTAGGAGTTCTAGAATGTGT GCTAAAAGTTTTGATCTACTGAGAAATCATTAGATATATCTCTCTGTTTCACATATATTTTCCT GGAAGCTGTTTGTTAAAGCTTCTGAGGAGCCTGAATCAAAACTGAATCCGTCCATGGAAGAATA CAACATATTAGCATTTTTTACGTGACCTTTTTGCAATTTGCCAATTTGATCATCCAACTAATAG AAACATATTCCAAACATTCCTCTAAGTAAAACAAAAGGTTGTCCTTTGCTGGTATTTGCATTTA AAAGAGCACTGCGCTTTTTTAACACCTTGCTGTTAGTTTTTTTTTAAAAGAAACCAAAAGCTTC ATTAACAGAAAGCTATGTTGGACAGGTACACAGTAAAAGCTATGGCCTGCTAGGTTCCTGGTTA TGGCAGTTAATTTCAAGATTAATACCACTTGATACATATTAGGTCACATATTGTTCTTCTGTGT CGATTAATACATTACAAATTCATAAACTATCTTTCTGAAATATGTGTTACCTAACTATCTTGCT TGGAGTTAAAAGTTTTGTTGTCATTAGCTAGTTACTTAAAGTATATCCCCTCCTTCCAAAAAGA ATCTCATTCTAGTTTTCTCCTAAGTCAAACTATTTTTGTAGTGCACCTATTTGGTGTTATAAAT GTTGATAATCTTCTTTATAAGCTCGGTCAAGCCTAAGATAGTTTGACTTGCCAAACTAAAGCCG TATTCTTTTCGGAACAGGGGTAGTATGAGCTTATGAATCTGCTGATTTTTATCCTTCAGGAAGG AGAAGACCCAAGGTTTCCTGGGAGAGCACGAACACTTGGTTCTGTAGGAACTGAACCCACTGCA AGGGAGGCAAGTGCGCATTTGCATGCTAGGTTGTTGGATAACACAACTCCAAGTGACCCACTAA CGAATACACA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.143334027

Conservation Information
Conserved circRNAs	NA
PMCS	0.143334027

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							264625416-264625440(+)
264625375-264627950(-)
264625404-264629031(-)
						
						Potential amino acid sequence
						
							MLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAFLVAYNPLYHVPNLVNECSIGFSGV
IFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSLLGHLCGILSGFAYTYGL
FNYLLPGPSFYSKIEGLSALSVCVRRPGFIMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNIS
SWMPSRHTSTAQEGEDPRFPGRARTLGSVGTEPTAREASAHLHARLLDNTTPSDPLTNTHIQVL
HICSLSWFFASCAIQHACLGTLGH*(+)
MCRTCICVFVSGSLGVVLSNNLACKCALASLAVGSVPTEPSVRALPGNLGSSPS*(-)
MKQRTMKENRCVEPVYVYSLVGHLELCYPTT*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	264625416-264625440(+) 264625375-264627950(-) 264625404-264629031(-)
Potential amino acid sequence	MLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAFLVAYNPLYHVPNLVNECSIGFSGV IFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSLLGHLCGILSGFAYTYGL FNYLLPGPSFYSKIEGLSALSVCVRRPGFIMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNIS SWMPSRHTSTAQEGEDPRFPGRARTLGSVGTEPTAREASAHLHARLLDNTTPSDPLTNTHIQVL HICSLSWFFASCAIQHACLGTLGH(+) MCRTCICVFVSGSLGVVLSNNLACKCALASLAVGSVPTEPSVRALPGNLGSSPS(-) MKQRTMKENRCVEPVYVYSLVGHLELCYPTT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d033502_circ_g.1

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