Plant Circular RNA Database

Detail information of AT1G71820_circ_g.7

			
						 General Information
					
						CircRNA Name
						AT1G71820_circ_g.7
					
						ID in PlantcircBase
						ath_circ_009663
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr1: 27011101-27014892  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						PcircRNA_finder
					
						Parent gene
						
							AT1G71820						
					
						Parent gene annotation
						
							SEC6
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT1G71820_circ_g.1 AT1G71820_circ_g.2 AT1G71820_circ_g.3 AT1G71820_circ_g.4 AT1G71820_circ_g.5 AT1G71820_circ_g.6 AT1G71820_circ_g.8 AT1G71820_circ_g.9 AT1G71820_circ_g.10 AT1G71820_circ_g.11 AT1G71820_circ_g.12 AT1G71820_circ_g.13 AT1G71820_circ_g.14 AT1G71820_circ_g.15 						
					
						Support reads
						1
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT1G71820.1:12
AT1G71820.2:12

General Information
CircRNA Name	AT1G71820_circ_g.7
ID in PlantcircBase	ath_circ_009663
Alias	NA
Organism	Arabidpsis thaliana
Position	chr1: 27011101-27014892 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	PcircRNA_finder
Parent gene	AT1G71820
Parent gene annotation	SEC6
Parent gene strand	+
Alternative splicing	AT1G71820_circ_g.1 AT1G71820_circ_g.2 AT1G71820_circ_g.3 AT1G71820_circ_g.4 AT1G71820_circ_g.5 AT1G71820_circ_g.6 AT1G71820_circ_g.8 AT1G71820_circ_g.9 AT1G71820_circ_g.10 AT1G71820_circ_g.11 AT1G71820_circ_g.12 AT1G71820_circ_g.13 AT1G71820_circ_g.14 AT1G71820_circ_g.15
Support reads	1
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT1G71820.1:12 AT1G71820.2:12

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATATTGACTACAGATAAACAACAACCTTCGCTGCTACGACCTTGCCATGGAGTTAAGTAATAGC
ACTTTAGAAGCTCTTCCACAAAATTATGCAGAGCAGagattaacagcacttgatggtaaacgaa
gatttgcattagcagctgctggagaggaggttgggaggctgaggtttgtatatattccactcgt
ttcctttc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							AGATTAACAGCACTTGATGGTAAACGAAGATTTGCATTAGCAGCTGCTGGAGAGGAGGTTGGGA
GGCTGAGGTTTGTATATATTCCACTCGTTTCCTTTCTTTGCTTTTTGTACTTACATGAAGTGAG
CCCGAAAGCTTTAATTCAAGAGTTACTGGTGTGCTATGAAAGAAAATAGGTCTCTATGCTAAAG
TAATGAGCAGTAGGTAGAGCTGTTACTCTTTTGGTAGTGCATATGATGATTTGATCCCGCCTCT
GGACTGTCTTTTCTTTTTACATGAGCATGCATACCAACTTCTAAAGAGTTGTTTTGATGGGTTC
AGGGAGTATTTTGAAGATGTTGATAGAACATGGGAAACATTCGAGAAGACACTATGGGGTCATG
TTTCCAACTATTACAAACTTTCTAAAGAAAGGTATTTTGAGTAAATATATGATTATGCTCAACT
TCTCCGTGTAATTCCATTTTTTTTAATTATTTCTACTGCCTTATTTTAGAACTATGATTCTTGC
TGGTTTTTTATAAGAGTAAGGCTAGGAAGTTAGATCAAGGATGCAAGCAATGTCAAAAGATGAG
ATGGACATAGTTGGACTGTACCCTTTATTCTGTAGCTATATATGAGCATTTATATGATAATACA
TAGTTTATGTAATGCTCTGTTCTCTGTTTTATGTTCTTAGCCAGACCTTGGGGATTAAGTACAC
GTTTAGACTTTGCTCCATGTTGAAATAAGCTATTTTCCTGTTGTTAAGCTCTTAATTCTGCTAA
GATATCAAATCTTACATATCCTTTTGGTTTATCTTAAACTTACTGATGTATCTTTGTTCTGCAG
TCCGCAAACACTGGTTCGTGCTTTGAGGTATGATCCCCCACCAGAGACATTCTTTACCTTTGTC
TATGGCATATATTCCCAAATTATTACGTTTCAGTAATTTTGTTGCAAACAAATCTATTTTAATT
AGCAAGGAAGATAGTGTATACCTATTTTCTGGTGATTAGCATCAAGATCAGTTCAAACTGGTTT
AGTAGGACAGCGAAGTCATTGTGTTACTGTGACAATCATTTTTAGACAAGCAAATTGTTTCTTT
TTACTTCCTTTAATGCAACATGCATTGCAATATCATGGATTTTATTTTGGCATTAGAAGTTTCT
TAAACACAAAGTCTCCTATCCAGAAGAAAATGAGTAGACTAATTTAAAGTGAACTAGTTAACTA
GAACTGGTACTAACTTTCAATGGTTTATTCTATCAAAGGGTTGTTGAGATGCAAGAAATTCTAG
ACCAACAGCTTGCTGAAGAAGCAGCAGAGGCTGAGGGAGAAGGTGCGATGGCATCTGTAGCAAA
TCCTCGAAGGCCTGGCAAGTGAGTCTGATATTTTTTGTTCGTATTTGTCTTGATTTGTTGTCTT
ATCTGTTATTCAAAATATCTTTCACTTTTTTACTAGGGGTTTGACTAAGCTATATTTTGCATTG
ATTTAATGTCCTGAAAAGCAATGGAATTTTATTAAAGTCCCCATAATCATTTGTGACATGTCCT
ATATTTATTCTGTTGAATCCAGGAAATCTACTACAACGTCAGCGTCGTCAAAGGGTCTTGCTCA
ACAGAAATTAAAAGTCCAAGGGAAAGGCTACAAGGACAAATGCTACGAGCAAATTCGGAAGGCG
GTTGAAGATCGATTCAACAGGCTTTTGACGGTGGGACTTTCTTTTTGAAAATTTCATTTGATGG
CATAGCTACAAGTAATGTGTTTCTCTGTGTGGTCATCCTAACACTGAACTATTGAACAGCTTGT
CTTTGAAGATCTAAAAGCAGCTTTGGAAGAAGCTAGAATGGTTTGTGCGACTGTTTCCCTTGCT
TTCATACACTTTTCTTCATTTTTTCTTTTCTGCAGTTTATGAAATTATATTCAACTATCTAATA
TATTTTTGTTTCTCAGTAGATCACCTTTAGTTGACTGAATTAGTTTTTTTTTTGGTTCTTAATA
AATATGGTTGATGAACTAGTAGTATGTTACTGTTCTGATACAAAAGTTCCAAATTGGCCTGACC
GTCTTATATTACTGTTCCTGTTCCATAATGATTGATGTCAACCTCGTTTTCTTCTGTTATCTTT
CACAAATATATATTTATCAACTGGGTTTTCACTTTCTTTTTATGGTGTTCCACAACTAGATTGG
AGAGGAACTTGGAGATATTTATGACTATGTGGCTCCTTGTTTTCCTCCAAGGTTTGTTCCTATC
TCGTTTTCCTCAAGTGGACAATGAAAGATTACAGCTTAAAATTTATTCTGTTCCCCAAGTGAAA
AAGGGTTCCTTAGCAATCTTCTTTGCTGGCAGATACGAGATATTTCAGCTTATGGTGAACCTGT
ATACCGAGAGATTCATACAAATGCTCAGATTGCTCAGTGACAGAGCAAACGATCTGACAAATAT
AGAGATTTTAAAGGTATGTAAAGCATGATTCTTAGTTCTCCCATGTTGTGTCGCAACTCAAACT
TTGCAGATACTGCTTTTGGTGCTTTGGCTCTGTGTTTTCTGACTGAATATCAAGGACATTTTTA
ATCAACCATGCATGATATTTAAGTAAATGTCAAGCTAGTCCGAGTTATTTGACAGGGAACACCA
TGGGAAATTATAAGAGGGGGTACTAATATTATGTGACTGTCTTTGTGTTGCCTCATCAAAATGC
CTCATTCGTTTTTTACCTTGTCTCTGTGCATTAGGTATCCTTTAGAGAGTGATGTATCTTTTCT
TTCTCTCTTCGATCTTGCTAGGTGACTGGTTGGGTGGTAGAGTACCAAGAAAACTTGATTGCAC
TTGGTGTTGATGATTCACTAGCTCAAGTGTGTTCTGAGAGCGGTTCAATGGATCCTCTAATGAA
TGCATATGTTGAAAGAATGCAAGCTACAACGAAGGTAATGACATACACGTTTGACCTACTCTGC
TAGTTTTTGACGTTAAAAATTTTTATAATTCTTTTTGCTTAAACTTTTGTTGCCAATTCTTTGG
TTGCAGAAATGGTACATGAATATCCTAGAGGCGGATAAGGTGCAACCACCTAAAAAAACTGAGG
AAGGAAAATTATATACACCGGCTGCTGTAGATTTATTCAGAATACTTGGAGAGCAAGTGCAAAT
TGTCAGAGATAACAGCACGGATGTTATGTTGTACAGGATTGCTTTAGCTATTATTCAGGCAAGT
TAAAGAGGTTGCAAAGACATTTCTTTGTTCGGCTATGAACTGAAAATATTCCATTTCCTTACTC
AGGCTATTTATTTACTATATATACTCAGAAATTTCAAATCGTTCTTTGCTTTCTTCTAAGACTC
GTGAAAGTTAATGTTGGAGACTTTACCCATTCCCAGCTTTTTTTTTCATATCTCACCCAAAATC
GTTGAATTCCGTTTACCCCCTTTTTTCTCTTTTCTATTTTCCCCCCTCTTTCATTGTGTCTAAC
TTTTATACTTCTTAAATTTCGTAACTTTTGTAGCATTGTGCATGTTCTAAATTTTGATTCATAT
TGTGAATTACTTCAGGTTATGATTGATTTCCAAGCAGCTGAAAAGAAGAGAGTTGATGAACCTG
CATCTGATATTGGTCTGGAACCTCTATGCGCTATGGTATGTCAAAAGATATGACTCTTTTGATG
ACACTATTTCTTTCTCCCATTTTCAGACGAATATTTATATGTTAATATTGACTACAGATAAACA
ACAACCTTCGCTGCTACGACCTTGCCATGGAGTTAAGTAATAGCACTTTAGAAGCTCTTCCACA
AAATTATGCAGAGCAG
						
					

			
		

Sequences
Splice junction sequence	ATATTGACTACAGATAAACAACAACCTTCGCTGCTACGACCTTGCCATGGAGTTAAGTAATAGC ACTTTAGAAGCTCTTCCACAAAATTATGCAGAGCAGagattaacagcacttgatggtaaacgaa gatttgcattagcagctgctggagaggaggttgggaggctgaggtttgtatatattccactcgt ttcctttc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	AGATTAACAGCACTTGATGGTAAACGAAGATTTGCATTAGCAGCTGCTGGAGAGGAGGTTGGGA GGCTGAGGTTTGTATATATTCCACTCGTTTCCTTTCTTTGCTTTTTGTACTTACATGAAGTGAG CCCGAAAGCTTTAATTCAAGAGTTACTGGTGTGCTATGAAAGAAAATAGGTCTCTATGCTAAAG TAATGAGCAGTAGGTAGAGCTGTTACTCTTTTGGTAGTGCATATGATGATTTGATCCCGCCTCT GGACTGTCTTTTCTTTTTACATGAGCATGCATACCAACTTCTAAAGAGTTGTTTTGATGGGTTC AGGGAGTATTTTGAAGATGTTGATAGAACATGGGAAACATTCGAGAAGACACTATGGGGTCATG TTTCCAACTATTACAAACTTTCTAAAGAAAGGTATTTTGAGTAAATATATGATTATGCTCAACT TCTCCGTGTAATTCCATTTTTTTTAATTATTTCTACTGCCTTATTTTAGAACTATGATTCTTGC TGGTTTTTTATAAGAGTAAGGCTAGGAAGTTAGATCAAGGATGCAAGCAATGTCAAAAGATGAG ATGGACATAGTTGGACTGTACCCTTTATTCTGTAGCTATATATGAGCATTTATATGATAATACA TAGTTTATGTAATGCTCTGTTCTCTGTTTTATGTTCTTAGCCAGACCTTGGGGATTAAGTACAC GTTTAGACTTTGCTCCATGTTGAAATAAGCTATTTTCCTGTTGTTAAGCTCTTAATTCTGCTAA GATATCAAATCTTACATATCCTTTTGGTTTATCTTAAACTTACTGATGTATCTTTGTTCTGCAG TCCGCAAACACTGGTTCGTGCTTTGAGGTATGATCCCCCACCAGAGACATTCTTTACCTTTGTC TATGGCATATATTCCCAAATTATTACGTTTCAGTAATTTTGTTGCAAACAAATCTATTTTAATT AGCAAGGAAGATAGTGTATACCTATTTTCTGGTGATTAGCATCAAGATCAGTTCAAACTGGTTT AGTAGGACAGCGAAGTCATTGTGTTACTGTGACAATCATTTTTAGACAAGCAAATTGTTTCTTT TTACTTCCTTTAATGCAACATGCATTGCAATATCATGGATTTTATTTTGGCATTAGAAGTTTCT TAAACACAAAGTCTCCTATCCAGAAGAAAATGAGTAGACTAATTTAAAGTGAACTAGTTAACTA GAACTGGTACTAACTTTCAATGGTTTATTCTATCAAAGGGTTGTTGAGATGCAAGAAATTCTAG ACCAACAGCTTGCTGAAGAAGCAGCAGAGGCTGAGGGAGAAGGTGCGATGGCATCTGTAGCAAA TCCTCGAAGGCCTGGCAAGTGAGTCTGATATTTTTTGTTCGTATTTGTCTTGATTTGTTGTCTT ATCTGTTATTCAAAATATCTTTCACTTTTTTACTAGGGGTTTGACTAAGCTATATTTTGCATTG ATTTAATGTCCTGAAAAGCAATGGAATTTTATTAAAGTCCCCATAATCATTTGTGACATGTCCT ATATTTATTCTGTTGAATCCAGGAAATCTACTACAACGTCAGCGTCGTCAAAGGGTCTTGCTCA ACAGAAATTAAAAGTCCAAGGGAAAGGCTACAAGGACAAATGCTACGAGCAAATTCGGAAGGCG GTTGAAGATCGATTCAACAGGCTTTTGACGGTGGGACTTTCTTTTTGAAAATTTCATTTGATGG CATAGCTACAAGTAATGTGTTTCTCTGTGTGGTCATCCTAACACTGAACTATTGAACAGCTTGT CTTTGAAGATCTAAAAGCAGCTTTGGAAGAAGCTAGAATGGTTTGTGCGACTGTTTCCCTTGCT TTCATACACTTTTCTTCATTTTTTCTTTTCTGCAGTTTATGAAATTATATTCAACTATCTAATA TATTTTTGTTTCTCAGTAGATCACCTTTAGTTGACTGAATTAGTTTTTTTTTTGGTTCTTAATA AATATGGTTGATGAACTAGTAGTATGTTACTGTTCTGATACAAAAGTTCCAAATTGGCCTGACC GTCTTATATTACTGTTCCTGTTCCATAATGATTGATGTCAACCTCGTTTTCTTCTGTTATCTTT CACAAATATATATTTATCAACTGGGTTTTCACTTTCTTTTTATGGTGTTCCACAACTAGATTGG AGAGGAACTTGGAGATATTTATGACTATGTGGCTCCTTGTTTTCCTCCAAGGTTTGTTCCTATC TCGTTTTCCTCAAGTGGACAATGAAAGATTACAGCTTAAAATTTATTCTGTTCCCCAAGTGAAA AAGGGTTCCTTAGCAATCTTCTTTGCTGGCAGATACGAGATATTTCAGCTTATGGTGAACCTGT ATACCGAGAGATTCATACAAATGCTCAGATTGCTCAGTGACAGAGCAAACGATCTGACAAATAT AGAGATTTTAAAGGTATGTAAAGCATGATTCTTAGTTCTCCCATGTTGTGTCGCAACTCAAACT TTGCAGATACTGCTTTTGGTGCTTTGGCTCTGTGTTTTCTGACTGAATATCAAGGACATTTTTA ATCAACCATGCATGATATTTAAGTAAATGTCAAGCTAGTCCGAGTTATTTGACAGGGAACACCA TGGGAAATTATAAGAGGGGGTACTAATATTATGTGACTGTCTTTGTGTTGCCTCATCAAAATGC CTCATTCGTTTTTTACCTTGTCTCTGTGCATTAGGTATCCTTTAGAGAGTGATGTATCTTTTCT TTCTCTCTTCGATCTTGCTAGGTGACTGGTTGGGTGGTAGAGTACCAAGAAAACTTGATTGCAC TTGGTGTTGATGATTCACTAGCTCAAGTGTGTTCTGAGAGCGGTTCAATGGATCCTCTAATGAA TGCATATGTTGAAAGAATGCAAGCTACAACGAAGGTAATGACATACACGTTTGACCTACTCTGC TAGTTTTTGACGTTAAAAATTTTTATAATTCTTTTTGCTTAAACTTTTGTTGCCAATTCTTTGG TTGCAGAAATGGTACATGAATATCCTAGAGGCGGATAAGGTGCAACCACCTAAAAAAACTGAGG AAGGAAAATTATATACACCGGCTGCTGTAGATTTATTCAGAATACTTGGAGAGCAAGTGCAAAT TGTCAGAGATAACAGCACGGATGTTATGTTGTACAGGATTGCTTTAGCTATTATTCAGGCAAGT TAAAGAGGTTGCAAAGACATTTCTTTGTTCGGCTATGAACTGAAAATATTCCATTTCCTTACTC AGGCTATTTATTTACTATATATACTCAGAAATTTCAAATCGTTCTTTGCTTTCTTCTAAGACTC GTGAAAGTTAATGTTGGAGACTTTACCCATTCCCAGCTTTTTTTTTCATATCTCACCCAAAATC GTTGAATTCCGTTTACCCCCTTTTTTCTCTTTTCTATTTTCCCCCCTCTTTCATTGTGTCTAAC TTTTATACTTCTTAAATTTCGTAACTTTTGTAGCATTGTGCATGTTCTAAATTTTGATTCATAT TGTGAATTACTTCAGGTTATGATTGATTTCCAAGCAGCTGAAAAGAAGAGAGTTGATGAACCTG CATCTGATATTGGTCTGGAACCTCTATGCGCTATGGTATGTCAAAAGATATGACTCTTTTGATG ACACTATTTCTTTCTCCCATTTTCAGACGAATATTTATATGTTAATATTGACTACAGATAAACA ACAACCTTCGCTGCTACGACCTTGCCATGGAGTTAAGTAATAGCACTTTAGAAGCTCTTCCACA AAATTATGCAGAGCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.119759368

Conservation Information
Conserved circRNAs	NA
PMCS	0.119759368

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27012365-27014889(+)
						
					

						Potential amino acid sequence
						
							MQEILDQQLAEEAAEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQ
IRKAVEDRFNRLLTLVFEDLKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFI
QMLRLLSDRANDLTNIEILKVTGWVVEYQENLIALGVDDSLAQVCSESGSMDPLMNAYVERMQA
TTKKWYMNILEADKVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLE
PLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQRLTALDGKRRFALAAAGEEVGRLREYFEDV
DRTWETFEKTLWGHVSNYYKLSKERYQILHILLVYLKLTDVSLFCSPQTLVRALRYDPPPETFF
TFVYGIYSQIITFQVVEMQEILDQQLAEEAAEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQ
QKLKVQGKGYKDKCYEQIRKAVEDRFNRLLTLVFEDLKAALEEARMIGEELGDIYDYVAPCFPP
RYEIFQLMVNLYTERFIQMLRLLSDRANDLTNIEILKVTGWVVEYQENLIALGVDDSLAQVCSE
SGSMDPLMNAYVERMQATTKKWYMNILEADKVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQ
AAEKKRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQRLTALDGKRRFAL
AAAGEEVGRLREYFEDVDRTWETFEKTLWGHVSNYYKLSKERYQILHILLVYLKLTDVSLFCSP
QTLVRALRYDPPPETFFTFVYGIYSQIITFQVVEMQEILDQQLAEEAAEAEGEGAMASVANPRR
PGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQIRKAVEDRFNRLLTLVFEDLKAALEEARMI
GEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANDLTNIEILKVTGWVVEYQE
NLIALGVDDSLAQVCSESGSMDPLMNAYVERMQATTKKWYMNILEADKVQPPKKTEEGKLYTPA
AVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQN
YAEQRLTALDGKRRFALAAAGEEVGRLREYFEDVDRTWETFEKTLWGHVSNYYKLSKERYQILH
ILLVYLKLTDVSLFCSPQTLVRALRYDPPPETFFTFVYGIYSQIITFQVVEMQEILDQQLAEEA
AEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQIRKAVEDRFNRLL
TLVFEDLKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANDL
TNIEILKVTGWVVEYQENLIALGVDDSLAQVCSESGSMDPLMNAYVERMQATTKKWYMNILEAD
KVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLEPLCAMINNNLRCY
DLAMELSNSTLEALPQNYAEQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27012365-27014889(+)
Potential amino acid sequence	MQEILDQQLAEEAAEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQ IRKAVEDRFNRLLTLVFEDLKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFI QMLRLLSDRANDLTNIEILKVTGWVVEYQENLIALGVDDSLAQVCSESGSMDPLMNAYVERMQA TTKKWYMNILEADKVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLE PLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQRLTALDGKRRFALAAAGEEVGRLREYFEDV DRTWETFEKTLWGHVSNYYKLSKERYQILHILLVYLKLTDVSLFCSPQTLVRALRYDPPPETFF TFVYGIYSQIITFQVVEMQEILDQQLAEEAAEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQ QKLKVQGKGYKDKCYEQIRKAVEDRFNRLLTLVFEDLKAALEEARMIGEELGDIYDYVAPCFPP RYEIFQLMVNLYTERFIQMLRLLSDRANDLTNIEILKVTGWVVEYQENLIALGVDDSLAQVCSE SGSMDPLMNAYVERMQATTKKWYMNILEADKVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQ AAEKKRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQRLTALDGKRRFAL AAAGEEVGRLREYFEDVDRTWETFEKTLWGHVSNYYKLSKERYQILHILLVYLKLTDVSLFCSP QTLVRALRYDPPPETFFTFVYGIYSQIITFQVVEMQEILDQQLAEEAAEAEGEGAMASVANPRR PGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQIRKAVEDRFNRLLTLVFEDLKAALEEARMI GEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANDLTNIEILKVTGWVVEYQE NLIALGVDDSLAQVCSESGSMDPLMNAYVERMQATTKKWYMNILEADKVQPPKKTEEGKLYTPA AVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQN YAEQRLTALDGKRRFALAAAGEEVGRLREYFEDVDRTWETFEKTLWGHVSNYYKLSKERYQILH ILLVYLKLTDVSLFCSPQTLVRALRYDPPPETFFTFVYGIYSQIITFQVVEMQEILDQQLAEEA AEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQIRKAVEDRFNRLL TLVFEDLKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANDL TNIEILKVTGWVVEYQENLIALGVDDSLAQVCSESGSMDPLMNAYVERMQATTKKWYMNILEAD KVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLEPLCAMINNNLRCY DLAMELSNSTLEALPQNYAEQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT1G71820_circ_g.7

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