Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0157600_circ_g.1 |
ID in PlantcircBase | osa_circ_018018 |
Alias | NA |
Organism | Oryza sativa |
Position | chr3: 3096100-3096446 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os03g0157600 |
Parent gene annotation |
Heat shock protein Hsp20 domain containing protein. (Os03t015760 0-00) |
Parent gene strand | - |
Alternative splicing | Os03g0157600_circ_igg.1 Os03g0157600_circ_g.2 Os03g0157600_circ_g.3 Os03g0157600_circ_g.4 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os03t0157600-00:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_004551* |
PMCS | 0.137863449 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |