Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018481_circ_g.2 |
ID in PlantcircBase | zma_circ_008846 |
Alias | zma_circ_0002025 |
Organism | Zea mays |
Position | chr5: 221574693-221575076 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d018481 |
Parent gene annotation |
myosin2 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d018481_T020:2 Zm00001d018481_T037:2 Zm00001d018481_T009:2 Zm00001d018481_T058:2 Zm00001d018481_T044:2 Zm00001d018481_T060:2 Zm00001d018481_T051:2 Zm00001d018481_T043:2 Zm00001d018481_T048:2 Zm00001d018481_T006:2 Zm00001d018481_T013:2 Zm00001d018481_T035:2 Zm00001d018481_T021:2 Zm00001d018481_T003:2 Zm00001d018481_T019:2 Zm00001d018481_T063:2 Zm00001d018481_T046:2 Zm00001d018481_T033:2 Zm00001d018481_T005:2 Zm00001d018481_T002:2 Zm00001d018481_T040:2 Zm00001d018481_T004:2 Zm00001d018481_T064:2 Zm00001d018481_T010:2 Zm00001d018481_T024:2 Zm00001d018481_T015:2 Zm00001d018481_T029:2 Zm00001d018481_T026:2 Zm00001d018481_T008:2 Zm00001d018481_T066:2 Zm00001d018481_T052:2 Zm00001d018481_T012:2 Zm00001d018481_T007:2 Zm00001d018481_T050:2 Zm00001d018481_T055:2 Zm00001d018481_T036:2 Zm00001d018481_T062:2 Zm00001d018481_T038:2 Zm00001d018481_T065:2 Zm00001d018481_T053:2 Zm00001d018481_T016:2 Zm00001d018481_T041:2 Zm00001d018481_T042:2 Zm00001d018481_T047:2 Zm00001d018481_T034:2 Zm00001d018481_T028:2 Zm00001d018481_T061:2 Zm00001d018481_T031:2 Zm00001d018481_T030:2 Zm00001d018481_T001:2 Zm00001d018481_T032:2 Zm00001d018481_T025:2 Zm00001d018481_T023:2 Zm00001d018481_T014:2 Zm00001d018481_T011:2 Zm00001d018481_T054:2 Zm00001d018481_T017:2 Zm00001d018481_T057:2 Zm00001d018481_T056:2 Zm00001d018481_T027:2 Zm00001d018481_T022:2 Zm00001d018481_T018:2 Zm00001d018481_T049:2 Zm00001d018481_T059:2 Zm00001d018481_T039:2 Zm00001d018481_T045:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.340827148 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
221575071-221574745(+) |
Potential amino acid sequence |
MWSHLSNGIISGQEQRLCCC*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |