Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0644200_circ_g.17 |
ID in PlantcircBase | osa_circ_031698 |
Alias | Os06circ14773 |
Organism | Oryza sativa |
Position | chr6: 26277142-26278036 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os06g0644200 |
Parent gene annotation |
Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase ) (H+-PPase) (Vacuolar H+-pyrophosphatase). (Os06t0644200-01);Si milar to Vacuolar H+-pyrophosphatase. (Os06t0644200-02);Similar to Vacuolar H+-pyrophosphatase. (Os06t0644200-03) |
Parent gene strand | + |
Alternative splicing | Os06g0644200_circ_g.9 Os06g0644200_circ_g.10 Os06g0644200_circ_g.11 Os06g0644200_circ_g.12 Os06g0644200_circ_g.13 Os06g0644200_circ_g.14 Os06g0644200_circ_g.15 Os06g0644200_circ_g.16 Os06g0644200_circ_g.18 Os06g0644200_circ_g.19 Os06g0644200_circ_g.20 Os06g0644200_circ_g.21 Os06g0644200_circ_g.22 Os06g0644200_circ_g.23 Os06g0644200_circ_g.24 Os06g0644200_circ_g.25 Os06g0644200_circ_g.26 Os06g0644200_circ_g.27 Os06g0644200_circ_g.28 Os06g0644200_circ_g.29 Os06g0644200_circ_g.30 |
Support reads | 3 |
Tissues | leaf and panicle |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os06t0644250-00:3 Os06t0644200-01:3 Os06t0644200-03:3 Os06t0644250-00:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.347312039 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |