Plant Circular RNA Database

Detail information of Zm00001d043376_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d043376_circ_g.2
					
						ID in PlantcircBase
						zma_circ_007787
					
						Alias
						Zm03circ00085, zma_circ_0001241, GRMZM2G460078_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 198081446-198085747  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d043376						
					
						Parent gene annotation
						
							Long-chain-fatty-acid-CoA ligase-like protein  
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d043376_circ_g.1 Zm00001d043376_circ_g.3 Zm00001d043376_circ_g.4 Zm00001d043376_circ_g.5 Zm00001d043376_circ_g.6 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d043376_T006:7
Zm00001d043376_T001:7
Zm00001d043376_T002:7
Zm00001d043376_T004:7
Zm00001d043376_T003:7
Zm00001d043376_T005:7

General Information
CircRNA Name	Zm00001d043376_circ_g.2
ID in PlantcircBase	zma_circ_007787
Alias	Zm03circ00085, zma_circ_0001241, GRMZM2G460078_C1
Organism	Zea mays
Position	chr3: 198081446-198085747 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d043376
Parent gene annotation	Long-chain-fatty-acid-CoA ligase-like protein
Parent gene strand	-
Alternative splicing	Zm00001d043376_circ_g.1 Zm00001d043376_circ_g.3 Zm00001d043376_circ_g.4 Zm00001d043376_circ_g.5 Zm00001d043376_circ_g.6
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d043376_T006:7 Zm00001d043376_T001:7 Zm00001d043376_T002:7 Zm00001d043376_T004:7 Zm00001d043376_T003:7 Zm00001d043376_T005:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATACTGTAATGGCCTCTGTACTTTTACTCGCATCGTTGGGATATGATTCTCGCCATCTCTGCCA
TATCCCGCTTACACTGAATTTTGGTATAAACTCAACctctaacagtactgcctcaatttctaat
gctgacagcttgtaaccgccaaatttcataatgtcggcatttgtgcctgcacaaggtaatgcaa
atgaggct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 645
Transcript exons: 198081446-198081519,198081651-198081741,198084779-198084
880,198084979-198085056,198085131-198085223,198085435-19
8085533,198085640-198085747
CTCTAACAGTACTGCCTCAATTTCTAATGCTGACAGCTTGTAACCGCCAAATTTCATAATGTCG
GCATTTGTGCGTCCCAAAATTATGAAGTATCCTTCCTCATCTACAGTTACTGTATCACCTGTCT
TGAAGAATCCTCCATCAATGAAAGATTCTGCGGTGACCTCTGGTCTTTTCCAATACTCCTTGAA
AAGAGATGGACTTCTAATGCAGAGCTCGCCAACTCCAGTTGTAGTTTCAGCCCCGTCCTCCATA
ATGATCTTGGCCTCAATGCGTGGAAGAGGTTTACCAACTGTACCTTCTTTTCGGATACCATGCA
ATGGATTAGACAGTGCCATGACAAACTCAGTCATACCATAGCGTTCCAAAAGACGATGGCCTGT
CACTTCCTCCCACCTCTTCATAAGTGGGGAAGGAAGAGCTGATGATCCACACATCATTAACCTC
AGATGCTTTGCAGCGTAAGAAGAGGCCGACTTTTGATCAGGATCCATACTATCATACCCTTGCA
GCAGACGTGTATACATGGTTGGAACTCCAGTAAATACTGTAATGGCCTCTGTACTTTTACTCGC
ATCGTTGGGATATGATTCTCGCCATCTCTGCCATATCCCGCTTACACTGAATTTTGGTATAAAC
TCAAC
						
					

						Genomic sequence
						
							CTCTAACAGTACTGCCTCAATTTCTAATGCTGACAGCTTGTAACCGCCAAATTTCATAATGTCG
GCATTTGTGCCTGCACAAGGTAATGCAAATGAGGCTACAAGCAAACCGAAGCTGACCCTAGGCA
GTAACACCACGAGGTGATGAAAACAGCAACTAGAAGGACATAAGCGTGCGTGCATGTGCATAAA
AACTGTTACTTACGTCCCAAAATTATGAAGTATCCTTCCTCATCTACAGTTACTGTATCACCTG
TCTTGAAGAATCCTCCATCAATGAAAGATTCTGCGGTGACCTGCAAACAGAAATTCACTGTTTT
CAATGATGAAATAATGTATCTTAACTTCTCAGCATGTGTCCTTCACTGGTTTCTATATGGCTGA
AATATCTAGTAAATTTCAAAATTTGTCATTTGAGCAGTACAGTGTAAACCCCAAAAGTTGATTT
AGAGGTCTAGGTAGTTTTATTATTTTACTTATTCAGAAAAGAGAGTAAATAGGGAATTTATTTT
AGTGTGTAAATTTTTCATTTGAGATATGTTCCTTTAAATAAATACTAAATAAATAAATATATTT
ATGCATCATTGTGGAATATTTGTTTGTGCATCTACATTTGAATTTCTAACAAGCTCCAATTTGA
GTTTGAAAATGAAACTGAAATTAGAAAATTAAATAGAAAAGAAAGGGAGAAACCGGCTTCCTAG
TCCGAAACCCCTGCCCCAGCCCACTTCTGCCCGCACCGCCCGACCCGCCAGTACGCCACTCGCG
CCCGCCGCCACTGTTGCTAGCAAGTGGGAGTGTGGGACCCGTCACCATGAGTCACCCGTCCGTG
CGATCACTTGTGTCTGCGCCAACTGGTGGGGCCCCTACGCCAACCTCTTCACTCTCACGTTACT
GTTCTTCTCTTCTGTAACAAATTTCAACACAATCCGTAACAAACGCGAGCTGTCGTAACCACCA
TCGGCGAGGCTGTTGGGAATCGTCCGAGCTCCCTGGGAATTGGACTCTGCCCGCCGGGGTATAA
AACCCGAGCGGACGCACCTCCCCTTAGGCCGTCAACGCAGCGCCATCGTGTGTCTACGCCAGAG
AACCATAATCGTCGTAGACAGAGAGTGGGGAGAGAGACAGAGATCACCGCCACTTCCGATTCAG
ACGATTCCCAGATTTCGTTCTTCATTGTCAGATCGTCGTGCGCCGCGGTTAGAGCTGTCGGCGT
CCTAGTCCTTGGTATGGATGTTCCCATCTAGTTCGCTTTGTTCTCCGCATTGAGTAGCACCTCT
TCGCGTTTAGTTCAGCTCACTGGAAAGCCTGGGCGCCTAACACCGGCAATGGCGCTGCCGCGGA
GGGCCTTGCCCCGTCATGGTGAGGGAGATAAGGGGGGATCCAGTACCGTAGATCTGTTCTGTTC
ATGGTGGATAGGATTAGATTATGCGATACCGTTTCGGTGCATTGAAACAGGACCGTAGATTTTT
GGATTGGTGACTCGGATTAGATCTAACGGTACCGGTTCGAGAGACCAAGTGCAAGTCGTTGATC
CATGGCCAGACGATCGATGCTCGTGCGGGATTAGTCAGTCGAGGCAATCTTTCTCAAGAGACCC
TAAGATTTCAAATAAACAATCTGCCATCCATTCATATGTATAAATCCTTACAAAGTGGTCCTAA
CATTTATAATTATAACCCTGAGTTTTCAATAAATACAACCCACCATCCGTTAGGGTCCGAATTA
CACTAAAGTCCCTTTGTTTATAATGTTAATTACAAAAAGGTCCCTAATTACCACAGATAAGCCT
TGGAATTTATATTTTTATTTAAAAACAGTTTTAAAACTTAGATAACTCATATCTTTCATGTTTT
AACTCCGATCTTAATGGTTCTCAAACCTATGGAATCGTATCAACGCGTAAACTTATATTACGCA
GTTGATTTCTTTGTTTGATGTAATGTTAGTTTTATTTATTGTTTGCATATGTGTATGTTTTGTT
ACGAATAGAAAAGCGAGGTTGCGAGAAACATGAAGCCTAACTTAAGGAAAGCATCTGAGCAGTT
GGAGTTACACCAAACCGTGATTACAATCTCGGTCAGGATTCGATGGGATTCGTTGTTTTGTCCC
GTTCCTGGTGAACGCCGGCAACAAAATCTAATGACTTTTTTAGATTTTTCGTTTGAAATTAAAA
AGACATGAAAAATCTAGGAAACTTCTATAAAAAACTAGATGTTCTCAGAAGTTCTAAAATATAT
TTGTTGTCCAAAAATCCATCTTTTCGTGCAAAATAAAATTCGTTGTGGACTTATATTTTATCGT
TGCTATTCCAAACTAGTTGATAGTTATTAGTTGGTAATTTTAAAAATATTAGGTACATGTTGTG
GACTTATTTCATACTTTTCTAGTTTTTTAGTGAGTTATTATACTGATATGCCTTGACAACAATA
TTTAGTGAAGATTTGTTATATTTCGGTTTAGGGGATAGCTGTTAGTTGATAGTTGTTGTTTAAA
TGTAGTTGTTCCTTGTGGTATAACATGTTAGTATTAGTTTCACACTTATTTGTATTGTTGTAGG
TAAAATGCCAGACCTAGTGTGGGAGCATGGAGAGAAGGTTGGTCAAGGTTTTAGGTGCAAGTAT
TGTCGTAAAGGGAAGAGTAGTGGCGGTGCTACTCGTTTCAAGGAGCATTTAGCACATCGAGGGA
AGGATGATAGAATTACCCATCTGTGTCTCTTGAAATAAAGAAATTCTTTGCTGGTTAGCTAGAC
AAGACAAAGGAAAAGAAGAGACAGAGGATTCGGCAGAGGCAACGAGCAGATGAAGCAAGAACTC
GTTATGATGCAATTTGTGTTATTGGGCAACCTGTGTTATGGAGAACTTTATATATACTTGTATG
ACACAACCGTAATCTTCTATTGATGTGTGTTGCACTCAAATTATGGTTTTCTATATGCATGTGT
GTTTTGTGTTTTTGTGCATCAAATTATTTGTGAATATATTGTTATTCATTGCGCAACATGGTTT
GAATAGAATACAGACAAATCCTACCAATTTTTTTAATTTTTTTCTAACCAAACTATGTTTCCCG
TACTGGCACACATACAAGATGCCATCTAGATTTGTCCTTAAATTTGAGTGTGACATACAACTTA
GCATAAATGTCAATGCCTGCAATCTTAAAAATCTAAAGCATTAAAAAACAATACATAACAATGC
ATTGAAATAAAAATGTATGCTTTACAGTTGTAGTTAGTAGGAATTAGAAACTTCCTAAATGAAA
TGGAATGTTCCCTCCAAAACTATACCCCATGATCATCAATTGGCAAAAGTAGAAACAGCACGAT
CATACCTCTGGTCTTTTCCAATACTCCTTGAAAAGAGATGGACTTCTAATGCAGAGCTCGCCAA
CTCCAGTTGTAGTTTCAGCCCCGTCCTCCATAATGATCTTGGCCTGAGTCAGAAAGATGACTTA
AAACTATGAAGCAATGCAGAATACACAGAATAACCAATGCTTTAATGATACTAACTCCCATGAA
TTGTTCATCATACCTCAATGCGTGGAAGAGGTTTACCAACTGTACCTTCTTTTCGGATACCATG
CAATGGATTAGACAGTGCCATGACAAACTGTAACCAATATTAAGTCTATCAGGAGTCATACAGT
TAATTAGTGTATTGACTAGATGGGGAATATTTTTTACCTCAGTCATACCATAGCGTTCCAAAAG
ACGATGGCCTGTCACTTCCTCCCACCTCTTCATAAGTGGGGAAGGAAGAGCTGATGATCCACAC
ATCTGCAGCAATTCAATGAGTATTAATGATAAAATCTTTATAATTCATGCATCAGTTCCATGAT
AGAACTGAAAAAGGTCTATAGAACTCACTAAGAATACAGATGTAAGAGTAAAACACAAACCAGC
AAATCACACTTCGATGCACAGCAAGTGAAAAAATGATAAATGATAAATGTATAAAGACTTAAAC
ACTGTTTCCAATGAACATTACCATTAACCTCAGATGCTTTGCAGCGTAAGAAGAGGCCGACTTT
TGATCAGGATCCATACTATCATACCCTTGCAGCAGACGTGTATACATGGTTGGAACCTGCCATA
AAAGAAGTATCAAATTACCTTAACTTATCAAACAATATGAAGAAAAATAGTTTGGCATGAATCT
GAAGATACTGTTATGCTATGACAGCAAATCATACTCCAGTAAATACTGTAATGGCCTCTGTACT
TTTACTCGCATCGTTGGGATATGATTCTCGCCATCTCTGCCATATCCCGCTTACACTGAATTTT
GGTATAAACTCAAC
						
					

			
		

Sequences
Splice junction sequence	ATACTGTAATGGCCTCTGTACTTTTACTCGCATCGTTGGGATATGATTCTCGCCATCTCTGCCA TATCCCGCTTACACTGAATTTTGGTATAAACTCAACctctaacagtactgcctcaatttctaat gctgacagcttgtaaccgccaaatttcataatgtcggcatttgtgcctgcacaaggtaatgcaa atgaggct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 645 Transcript exons: 198081446-198081519,198081651-198081741,198084779-198084 880,198084979-198085056,198085131-198085223,198085435-19 8085533,198085640-198085747 CTCTAACAGTACTGCCTCAATTTCTAATGCTGACAGCTTGTAACCGCCAAATTTCATAATGTCG GCATTTGTGCGTCCCAAAATTATGAAGTATCCTTCCTCATCTACAGTTACTGTATCACCTGTCT TGAAGAATCCTCCATCAATGAAAGATTCTGCGGTGACCTCTGGTCTTTTCCAATACTCCTTGAA AAGAGATGGACTTCTAATGCAGAGCTCGCCAACTCCAGTTGTAGTTTCAGCCCCGTCCTCCATA ATGATCTTGGCCTCAATGCGTGGAAGAGGTTTACCAACTGTACCTTCTTTTCGGATACCATGCA ATGGATTAGACAGTGCCATGACAAACTCAGTCATACCATAGCGTTCCAAAAGACGATGGCCTGT CACTTCCTCCCACCTCTTCATAAGTGGGGAAGGAAGAGCTGATGATCCACACATCATTAACCTC AGATGCTTTGCAGCGTAAGAAGAGGCCGACTTTTGATCAGGATCCATACTATCATACCCTTGCA GCAGACGTGTATACATGGTTGGAACTCCAGTAAATACTGTAATGGCCTCTGTACTTTTACTCGC ATCGTTGGGATATGATTCTCGCCATCTCTGCCATATCCCGCTTACACTGAATTTTGGTATAAAC TCAAC
Genomic sequence	CTCTAACAGTACTGCCTCAATTTCTAATGCTGACAGCTTGTAACCGCCAAATTTCATAATGTCG GCATTTGTGCCTGCACAAGGTAATGCAAATGAGGCTACAAGCAAACCGAAGCTGACCCTAGGCA GTAACACCACGAGGTGATGAAAACAGCAACTAGAAGGACATAAGCGTGCGTGCATGTGCATAAA AACTGTTACTTACGTCCCAAAATTATGAAGTATCCTTCCTCATCTACAGTTACTGTATCACCTG TCTTGAAGAATCCTCCATCAATGAAAGATTCTGCGGTGACCTGCAAACAGAAATTCACTGTTTT CAATGATGAAATAATGTATCTTAACTTCTCAGCATGTGTCCTTCACTGGTTTCTATATGGCTGA AATATCTAGTAAATTTCAAAATTTGTCATTTGAGCAGTACAGTGTAAACCCCAAAAGTTGATTT AGAGGTCTAGGTAGTTTTATTATTTTACTTATTCAGAAAAGAGAGTAAATAGGGAATTTATTTT AGTGTGTAAATTTTTCATTTGAGATATGTTCCTTTAAATAAATACTAAATAAATAAATATATTT ATGCATCATTGTGGAATATTTGTTTGTGCATCTACATTTGAATTTCTAACAAGCTCCAATTTGA GTTTGAAAATGAAACTGAAATTAGAAAATTAAATAGAAAAGAAAGGGAGAAACCGGCTTCCTAG TCCGAAACCCCTGCCCCAGCCCACTTCTGCCCGCACCGCCCGACCCGCCAGTACGCCACTCGCG CCCGCCGCCACTGTTGCTAGCAAGTGGGAGTGTGGGACCCGTCACCATGAGTCACCCGTCCGTG CGATCACTTGTGTCTGCGCCAACTGGTGGGGCCCCTACGCCAACCTCTTCACTCTCACGTTACT GTTCTTCTCTTCTGTAACAAATTTCAACACAATCCGTAACAAACGCGAGCTGTCGTAACCACCA TCGGCGAGGCTGTTGGGAATCGTCCGAGCTCCCTGGGAATTGGACTCTGCCCGCCGGGGTATAA AACCCGAGCGGACGCACCTCCCCTTAGGCCGTCAACGCAGCGCCATCGTGTGTCTACGCCAGAG AACCATAATCGTCGTAGACAGAGAGTGGGGAGAGAGACAGAGATCACCGCCACTTCCGATTCAG ACGATTCCCAGATTTCGTTCTTCATTGTCAGATCGTCGTGCGCCGCGGTTAGAGCTGTCGGCGT CCTAGTCCTTGGTATGGATGTTCCCATCTAGTTCGCTTTGTTCTCCGCATTGAGTAGCACCTCT TCGCGTTTAGTTCAGCTCACTGGAAAGCCTGGGCGCCTAACACCGGCAATGGCGCTGCCGCGGA GGGCCTTGCCCCGTCATGGTGAGGGAGATAAGGGGGGATCCAGTACCGTAGATCTGTTCTGTTC ATGGTGGATAGGATTAGATTATGCGATACCGTTTCGGTGCATTGAAACAGGACCGTAGATTTTT GGATTGGTGACTCGGATTAGATCTAACGGTACCGGTTCGAGAGACCAAGTGCAAGTCGTTGATC CATGGCCAGACGATCGATGCTCGTGCGGGATTAGTCAGTCGAGGCAATCTTTCTCAAGAGACCC TAAGATTTCAAATAAACAATCTGCCATCCATTCATATGTATAAATCCTTACAAAGTGGTCCTAA CATTTATAATTATAACCCTGAGTTTTCAATAAATACAACCCACCATCCGTTAGGGTCCGAATTA CACTAAAGTCCCTTTGTTTATAATGTTAATTACAAAAAGGTCCCTAATTACCACAGATAAGCCT TGGAATTTATATTTTTATTTAAAAACAGTTTTAAAACTTAGATAACTCATATCTTTCATGTTTT AACTCCGATCTTAATGGTTCTCAAACCTATGGAATCGTATCAACGCGTAAACTTATATTACGCA GTTGATTTCTTTGTTTGATGTAATGTTAGTTTTATTTATTGTTTGCATATGTGTATGTTTTGTT ACGAATAGAAAAGCGAGGTTGCGAGAAACATGAAGCCTAACTTAAGGAAAGCATCTGAGCAGTT GGAGTTACACCAAACCGTGATTACAATCTCGGTCAGGATTCGATGGGATTCGTTGTTTTGTCCC GTTCCTGGTGAACGCCGGCAACAAAATCTAATGACTTTTTTAGATTTTTCGTTTGAAATTAAAA AGACATGAAAAATCTAGGAAACTTCTATAAAAAACTAGATGTTCTCAGAAGTTCTAAAATATAT TTGTTGTCCAAAAATCCATCTTTTCGTGCAAAATAAAATTCGTTGTGGACTTATATTTTATCGT TGCTATTCCAAACTAGTTGATAGTTATTAGTTGGTAATTTTAAAAATATTAGGTACATGTTGTG GACTTATTTCATACTTTTCTAGTTTTTTAGTGAGTTATTATACTGATATGCCTTGACAACAATA TTTAGTGAAGATTTGTTATATTTCGGTTTAGGGGATAGCTGTTAGTTGATAGTTGTTGTTTAAA TGTAGTTGTTCCTTGTGGTATAACATGTTAGTATTAGTTTCACACTTATTTGTATTGTTGTAGG TAAAATGCCAGACCTAGTGTGGGAGCATGGAGAGAAGGTTGGTCAAGGTTTTAGGTGCAAGTAT TGTCGTAAAGGGAAGAGTAGTGGCGGTGCTACTCGTTTCAAGGAGCATTTAGCACATCGAGGGA AGGATGATAGAATTACCCATCTGTGTCTCTTGAAATAAAGAAATTCTTTGCTGGTTAGCTAGAC AAGACAAAGGAAAAGAAGAGACAGAGGATTCGGCAGAGGCAACGAGCAGATGAAGCAAGAACTC GTTATGATGCAATTTGTGTTATTGGGCAACCTGTGTTATGGAGAACTTTATATATACTTGTATG ACACAACCGTAATCTTCTATTGATGTGTGTTGCACTCAAATTATGGTTTTCTATATGCATGTGT GTTTTGTGTTTTTGTGCATCAAATTATTTGTGAATATATTGTTATTCATTGCGCAACATGGTTT GAATAGAATACAGACAAATCCTACCAATTTTTTTAATTTTTTTCTAACCAAACTATGTTTCCCG TACTGGCACACATACAAGATGCCATCTAGATTTGTCCTTAAATTTGAGTGTGACATACAACTTA GCATAAATGTCAATGCCTGCAATCTTAAAAATCTAAAGCATTAAAAAACAATACATAACAATGC ATTGAAATAAAAATGTATGCTTTACAGTTGTAGTTAGTAGGAATTAGAAACTTCCTAAATGAAA TGGAATGTTCCCTCCAAAACTATACCCCATGATCATCAATTGGCAAAAGTAGAAACAGCACGAT CATACCTCTGGTCTTTTCCAATACTCCTTGAAAAGAGATGGACTTCTAATGCAGAGCTCGCCAA CTCCAGTTGTAGTTTCAGCCCCGTCCTCCATAATGATCTTGGCCTGAGTCAGAAAGATGACTTA AAACTATGAAGCAATGCAGAATACACAGAATAACCAATGCTTTAATGATACTAACTCCCATGAA TTGTTCATCATACCTCAATGCGTGGAAGAGGTTTACCAACTGTACCTTCTTTTCGGATACCATG CAATGGATTAGACAGTGCCATGACAAACTGTAACCAATATTAAGTCTATCAGGAGTCATACAGT TAATTAGTGTATTGACTAGATGGGGAATATTTTTTACCTCAGTCATACCATAGCGTTCCAAAAG ACGATGGCCTGTCACTTCCTCCCACCTCTTCATAAGTGGGGAAGGAAGAGCTGATGATCCACAC ATCTGCAGCAATTCAATGAGTATTAATGATAAAATCTTTATAATTCATGCATCAGTTCCATGAT AGAACTGAAAAAGGTCTATAGAACTCACTAAGAATACAGATGTAAGAGTAAAACACAAACCAGC AAATCACACTTCGATGCACAGCAAGTGAAAAAATGATAAATGATAAATGTATAAAGACTTAAAC ACTGTTTCCAATGAACATTACCATTAACCTCAGATGCTTTGCAGCGTAAGAAGAGGCCGACTTT TGATCAGGATCCATACTATCATACCCTTGCAGCAGACGTGTATACATGGTTGGAACCTGCCATA AAAGAAGTATCAAATTACCTTAACTTATCAAACAATATGAAGAAAAATAGTTTGGCATGAATCT GAAGATACTGTTATGCTATGACAGCAAATCATACTCCAGTAAATACTGTAATGGCCTCTGTACT TTTACTCGCATCGTTGGGATATGATTCTCGCCATCTCTGCCATATCCCGCTTACACTGAATTTT GGTATAAACTCAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.067403713

Conservation Information
Conserved circRNAs	NA
PMCS	0.067403713

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							198085524-198081485(+)
198085526-198081448(-)
						
						Potential amino acid sequence
						
							MVGTPVNTVMASVLLLASLGYDSRHLCHIPLTLNFGINSTSNSTASISNADSL*(+)
MYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGMTEFVM
ALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVTAESFI
DGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALEIEAVLLEVEFIPKFSVSGIWQRW
RESYPNDASKSTEAITVFTGVPTMYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPL
MKRWEEVTGHRLLERYGMTEFVMALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGEL
CIRSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALE
IEAVLLEVEFIPKFSVSGIWQRWRESYPNDASKSTEAITVFTGVPTMYTRLLQGYDSMDPDQKS
ASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGMTEFVMALSNPLHGIRKEGTVGKP
LPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEEGY
FIILGRTNADIMKFGGYKLSALEIEAVLLEVEFIPKFSVSGIWQRWRESYPNDASKSTEAITVF
TGVPTMYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGM
TEFVMALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVT
AESFIDGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALEIEAVLLE(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	198085524-198081485(+) 198085526-198081448(-)
Potential amino acid sequence	MVGTPVNTVMASVLLLASLGYDSRHLCHIPLTLNFGINSTSNSTASISNADSL*(+) MYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGMTEFVM ALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVTAESFI DGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALEIEAVLLEVEFIPKFSVSGIWQRW RESYPNDASKSTEAITVFTGVPTMYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPL MKRWEEVTGHRLLERYGMTEFVMALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGEL CIRSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALE IEAVLLEVEFIPKFSVSGIWQRWRESYPNDASKSTEAITVFTGVPTMYTRLLQGYDSMDPDQKS ASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGMTEFVMALSNPLHGIRKEGTVGKP LPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEEGY FIILGRTNADIMKFGGYKLSALEIEAVLLEVEFIPKFSVSGIWQRWRESYPNDASKSTEAITVF TGVPTMYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGM TEFVMALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKRPEVT AESFIDGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALEIEAVLLE(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d043376_circ_g.2

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