Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0188100_circ_g.4 |
ID in PlantcircBase | osa_circ_006360 |
Alias | Os10circ01703 |
Organism | Oryza sativa |
Position | chr10: 6083432-6084353 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os10g0188100 |
Parent gene annotation |
Conserved hypothetical protein. (Os10t0188100-01);Similar to tra nscription initiation factor IIF, alpha subunit. (Os10t0188100-0 2);Transcription initiation factor IIF, alpha subunit family pro tein. (Os10t0188100-03);Conserved hypothetical protein. (Os10t01 88100-04) |
Parent gene strand | - |
Alternative splicing | Os10g0188100_circ_g.1 Os10g0188100_circ_g.2 Os10g0188100_circ_g.3 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Os10t0188100-02:2 Os10t0188100-04:2 Os10t0188100-03:2 Os10t0188100-01:2 |
Conservation Information | |
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Conserved circRNAs | osi_circ_002763* |
PMCS | 0.396587211 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |