Plant Circular RNA Database

Detail information of Os05g0163000_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os05g0163000_circ_g.2
					
						ID in PlantcircBase
						osa_circ_026768
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 3692612-3696483  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os05g0163000						
					
						Parent gene annotation
						
							Arginyl-tRNA synthetase, class Ic family protein. (Os05t0163000-
01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os05g0163000_circ_g.3 Os05g0163000_circ_g.4 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0163050-00:10
Os05t0163000-01:10
Os05t0163050-00:10

General Information
CircRNA Name	Os05g0163000_circ_g.2
ID in PlantcircBase	osa_circ_026768
Alias	NA
Organism	Oryza sativa
Position	chr5: 3692612-3696483 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os05g0163000
Parent gene annotation	Arginyl-tRNA synthetase, class Ic family protein. (Os05t0163000- 01)
Parent gene strand	+
Alternative splicing	Os05g0163000_circ_g.3 Os05g0163000_circ_g.4
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0163050-00:10 Os05t0163000-01:10 Os05t0163050-00:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTGACTCTGTTTTCCTGTTTTTCTTCTCAGAGTGGTGCCATTTCTCTTGATCATCCAGATGAG
CGTGTCTTGGGACTGTACCTGATCCGATTTGCAGAGtttggaatgctcatacaatatctatttg
aaaaatttccaaattgggaggaaattggtagccaggctattggtgaccttcaggtaaggctgtt
ccctgcac

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TTTGGAATGCTCATACAATATCTATTTGAAAAATTTCCAAATTGGGAGGAAATTGGTAGCCAGG
CTATTGGTGACCTTCAGGTAAGGCTGTTCCCTGCACTGATGCTAGACTGCTATATATCACTTGC
CGTCTGGCATGAAAACATAGAAATGCATGATGAAAAGTAAGGCATGCTCAATTAAAGTATATAA
ATGTGTATTTAGTTCGATACGGGATATCCATGTCAAAACCTATATCATAAAAATATTGACATTT
GAGTACGTAATTAATTGTATAAAAATAAATTACAGTGCTGAGTTATTGTCTTGTTCATGTTAGG
ACTCATACGGTGCTTCGCTTGTCTATATCATTTATTTGGCATCTTAAACTTCTCAAGCTTAACC
TGTGCATACAATATTGTTAGGTTTTAGTGTTCTATGCCTATGAAAGTGCAAAAGGCCAATAACT
GATGGATGAAATTTGTGAATCATGTGATGTTATTTTGCGCACCAAATTGCATTGCATCGCATTG
CCTTTTTTCCCCATATCTTTAGCTCAAGTAGTGTGGGCCAGGAGGTTGATTTGAAAACTCAATG
CATCGAATCTTGCTTGTAGCTGCTTATTTCCTATTTTGGTGGTTGCCTACTTCCCTTCCTAGTA
ATCCATCACAATATTTTGGAACTTTAAAGCTGTGCTCAAAATTATTTCTGAATATGTATGTCAT
TCAACATACACTCCTTACACTGTAATCATACAGAAACCATGCACACATTATCTCATTTAGTTAC
TACCATTTGCATGTTCAGTTGTGTACAAATGTATTTGTCTTCATCGGACAATGTTGCTTCCTTG
TGTCCCAATTAGACTTAATTTCTTCGTGTTATGTATTTATCTTTGCCAAAGGTGCAAAGTAGCA
CTTAGTTTGTATCATGTACAATTTGGTCATCTGTTACAGACTTTCTATAAAGCGTCCAAGAACC
GCTTTGATGGTGATGCAGAATTTAAAGACAGAGCTCAACAAGCAGTCGTTAGACTTCAGGTCAG
TGCACCTTCTTGGATCTGGAATATGTTAATGTTTTTTTTTTTTTTTGGGGGGGGGGGAGACATG
GAAACACTTTGCGTGTCATTCCATTAGAGATAGAAAATGAGTATGTTAAAATTGCATCTTATCA
TCCTCATACAATGCCTAAGAAATATATTAACTGTAGGGAGGGGAAGAGAGATACCGTGCTGCTT
GGAACAAGATTTGTGAAATCAGCAGGAATGAATTTGACATGGTTTACAAGCTCTTGAATGTAAA
GCTTGAAGAAAAGGTAGTGTCACACTCTATTGGACGCGACTTATATTTCTTTAGAAGGTTGCTT
ATCAATAACATGAATTTGCTACCTGAAATTTCTGTTTGTTGTTTTAGTAGAATATTTGCGCAAC
CATCATCCCTTTCCTTTTCTATATAGGATCTGAGACTTAAACTTTTACTGTATCAATTTTTATG
ATATTTTTGGATAGATTGTTCTTTCTCTTGTTCCCATCTGAGCCATTTTGAAAAGTCTCTGATA
ACTAACCACTAGTTTTACATGACTCAACAAGGTGTACCTCATCTTCATATGAAGAGTGGAAACA
TTTTGCTGCCAAAATTTTACAAATTAGTCAGTTGCTGATTGGGGTCCTTTTACTTGATATTTCT
CTGTTGCATAGCTTGTGATTCCTATTGGAAGATGTATTGACGTTCATATTCCAGGGATGTTAGA
AACACATTCAATTTGTTGAACTTCTGTCTTTTTAGCTGAATCCATTAGTCAATATTTTCAGGAG
ATATTTATAGGGCTTCACTTATCTGTTTTGTCGATATGTATTTGTTGAAGTTTCCGATGGCACT
AATATTAATTTAGTTGGATTTCTGGATTTCTTTCTTATTAGTAAAAACATCAGTTTGTCTGTTT
ATGATCTGTTACAGCTTGTATGGCTGCATTTTATCTTAATCCATTTTGACAATAGCACCTGTAG
CTGTGTGTACTTGCTTTCAACCAACTTTTGGCTATTGGTATCATGAAATGCTTATGTTTGTCGT
TTTCTTCCCTGAGCATCCAAGCAGCTTGTTGATTTATATTTTGTAGTGTTGAGAAGAGAGCTAT
TCTTTTCAGGGAGAGAGCTTTTATAATCCTTTTATTCCACAAGTCTTGGAAGAGTTGAATAACA
AAGGTTTGATCAAAGAAAGCGAGGGTGCTAAAGTGATATTCATAGAAGGCCATCAAATCCCTTT
GATAGTGGTTAAAAGGGACGGTGGCTTTAACTATGCCTCAACAGACTTAGCTGCTCTATGGTGA
GTTGCTAATCGATAATTTTGGTGTGTTCCTACAGTGCAATTACTCTTATATTAGCTATAATTTG
CAGAAACAAAGTGAATATATTTTCGTAGTTGATTCAGTCTATTTCCACAGGATCAGAATTTGTG
AATGTAATCGTTCTATTTGTGCTTTTATGCAGGTACCGTCTTAATGTTGAGAAGGCAGAATGGA
TAATATACGTAACAGATGTTGGACAGCAGCAGCACTTTGACATGTTCTTTAATGTAAGAATGCG
CCCTTTGTCTTCATAACATGTTACATAATCTTGGTGCAAGCAATTCTTATCAGATAATCAATTA
GATATATTATTTCATTTCCCTTTGCTAAAACTTTTGTTGTGTTAACAGGCTGCCAGAATGGCTG
GCTGGCTTCCAGATCCAAAAGAAAAGAAATATCCAAAAACGAATCATGTTGGGTTTGGTCTTGT
TCTTGGATCAGATGGCAAGCGTTTCCGAACTCGTAGTACCGAAGTTGTTCGATTGATAGAGCTA
CTTGATGAGGCTAAATCTCGGAGTAAATCAGAACTTCTCCAGCGACTAACAGAAAATGGTAAAC
GGTCATTATTTTCTAGTTTCTCTCTCTTTTGTTTGCCTGAGGTAAAATATGTTCATGAATTTAT
TTAGGTAAAATTGTTGATTGGACTGAGGAGGAACTGGAAAAGACTTCAGAAGCAGTAGGATATG
GCGCTGTCAAGTATGTACAAGATTTCTTCTTTCAGGAAGACAAATATGTTGAACTGAAATATGA
TAACAAAGCTTTTTAAATGCTTATCCAATTAGTACTCTTATGTTTTTCTGCCTGATAAACACAG
GTATGCAGATCTGAAGAACAATCGTCTTACCAATTACACATTTAGCTTTGAACAAATGCTGAGT
GATAAGGTATTTCTAGACTCCACTATTTGTTTACTTGTATAAAAGGGTGTTTTTCTCCATTAAT
TTTATTTGTGTTAAAACTTTTATGCGCCACATATTTGCTTATGATGTATTCCAGTATTTGTGGA
AGGATCTGTTGCTCTATGTTCTGCATTGGATATTGAAAATCACAGTCTATAGTGGTCGCTCTTT
TGCATAAATGAAAAAATATGTTCTTGAGTAGTTTCTGGGCAGATTCTTTATATTAGTAAGTAGT
TGGTGAACCCATTCACCTTCTTGCTTACTCTCATTACTTGTTATTGACAAGCTCATTCCTTTTT
GTCACCAGGGAAATACAGCTGTTTACCTTCAGTATGCTCATGCTCGCATTTGCTCTATAATCAG
GAAATCCAACAAGGATGTAGAAGAGCTGAAAATGGTAATACTTGTGTTATTTCTATGCACTGAT
TCTATTGTTGATTTTATAAAGTCCTGCTGTTGTTATTTTAGAGTTCCATCATCTTTTTTTTTTT
ACTTGAGTTCCATCATCAATTATTCGTTCTCTTTCAGCTATCAGACATGGATTTAAACACGTTG
ACTCTGTTTTCCTGTTTTTCTTCTCAGAGTGGTGCCATTTCTCTTGATCATCCAGATGAGCGTG
TCTTGGGACTGTACCTGATCCGATTTGCAGAG
						
					

			
		

Sequences
Splice junction sequence	GTTGACTCTGTTTTCCTGTTTTTCTTCTCAGAGTGGTGCCATTTCTCTTGATCATCCAGATGAG CGTGTCTTGGGACTGTACCTGATCCGATTTGCAGAGtttggaatgctcatacaatatctatttg aaaaatttccaaattgggaggaaattggtagccaggctattggtgaccttcaggtaaggctgtt ccctgcac
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TTTGGAATGCTCATACAATATCTATTTGAAAAATTTCCAAATTGGGAGGAAATTGGTAGCCAGG CTATTGGTGACCTTCAGGTAAGGCTGTTCCCTGCACTGATGCTAGACTGCTATATATCACTTGC CGTCTGGCATGAAAACATAGAAATGCATGATGAAAAGTAAGGCATGCTCAATTAAAGTATATAA ATGTGTATTTAGTTCGATACGGGATATCCATGTCAAAACCTATATCATAAAAATATTGACATTT GAGTACGTAATTAATTGTATAAAAATAAATTACAGTGCTGAGTTATTGTCTTGTTCATGTTAGG ACTCATACGGTGCTTCGCTTGTCTATATCATTTATTTGGCATCTTAAACTTCTCAAGCTTAACC TGTGCATACAATATTGTTAGGTTTTAGTGTTCTATGCCTATGAAAGTGCAAAAGGCCAATAACT GATGGATGAAATTTGTGAATCATGTGATGTTATTTTGCGCACCAAATTGCATTGCATCGCATTG CCTTTTTTCCCCATATCTTTAGCTCAAGTAGTGTGGGCCAGGAGGTTGATTTGAAAACTCAATG CATCGAATCTTGCTTGTAGCTGCTTATTTCCTATTTTGGTGGTTGCCTACTTCCCTTCCTAGTA ATCCATCACAATATTTTGGAACTTTAAAGCTGTGCTCAAAATTATTTCTGAATATGTATGTCAT TCAACATACACTCCTTACACTGTAATCATACAGAAACCATGCACACATTATCTCATTTAGTTAC TACCATTTGCATGTTCAGTTGTGTACAAATGTATTTGTCTTCATCGGACAATGTTGCTTCCTTG TGTCCCAATTAGACTTAATTTCTTCGTGTTATGTATTTATCTTTGCCAAAGGTGCAAAGTAGCA CTTAGTTTGTATCATGTACAATTTGGTCATCTGTTACAGACTTTCTATAAAGCGTCCAAGAACC GCTTTGATGGTGATGCAGAATTTAAAGACAGAGCTCAACAAGCAGTCGTTAGACTTCAGGTCAG TGCACCTTCTTGGATCTGGAATATGTTAATGTTTTTTTTTTTTTTTGGGGGGGGGGGAGACATG GAAACACTTTGCGTGTCATTCCATTAGAGATAGAAAATGAGTATGTTAAAATTGCATCTTATCA TCCTCATACAATGCCTAAGAAATATATTAACTGTAGGGAGGGGAAGAGAGATACCGTGCTGCTT GGAACAAGATTTGTGAAATCAGCAGGAATGAATTTGACATGGTTTACAAGCTCTTGAATGTAAA GCTTGAAGAAAAGGTAGTGTCACACTCTATTGGACGCGACTTATATTTCTTTAGAAGGTTGCTT ATCAATAACATGAATTTGCTACCTGAAATTTCTGTTTGTTGTTTTAGTAGAATATTTGCGCAAC CATCATCCCTTTCCTTTTCTATATAGGATCTGAGACTTAAACTTTTACTGTATCAATTTTTATG ATATTTTTGGATAGATTGTTCTTTCTCTTGTTCCCATCTGAGCCATTTTGAAAAGTCTCTGATA ACTAACCACTAGTTTTACATGACTCAACAAGGTGTACCTCATCTTCATATGAAGAGTGGAAACA TTTTGCTGCCAAAATTTTACAAATTAGTCAGTTGCTGATTGGGGTCCTTTTACTTGATATTTCT CTGTTGCATAGCTTGTGATTCCTATTGGAAGATGTATTGACGTTCATATTCCAGGGATGTTAGA AACACATTCAATTTGTTGAACTTCTGTCTTTTTAGCTGAATCCATTAGTCAATATTTTCAGGAG ATATTTATAGGGCTTCACTTATCTGTTTTGTCGATATGTATTTGTTGAAGTTTCCGATGGCACT AATATTAATTTAGTTGGATTTCTGGATTTCTTTCTTATTAGTAAAAACATCAGTTTGTCTGTTT ATGATCTGTTACAGCTTGTATGGCTGCATTTTATCTTAATCCATTTTGACAATAGCACCTGTAG CTGTGTGTACTTGCTTTCAACCAACTTTTGGCTATTGGTATCATGAAATGCTTATGTTTGTCGT TTTCTTCCCTGAGCATCCAAGCAGCTTGTTGATTTATATTTTGTAGTGTTGAGAAGAGAGCTAT TCTTTTCAGGGAGAGAGCTTTTATAATCCTTTTATTCCACAAGTCTTGGAAGAGTTGAATAACA AAGGTTTGATCAAAGAAAGCGAGGGTGCTAAAGTGATATTCATAGAAGGCCATCAAATCCCTTT GATAGTGGTTAAAAGGGACGGTGGCTTTAACTATGCCTCAACAGACTTAGCTGCTCTATGGTGA GTTGCTAATCGATAATTTTGGTGTGTTCCTACAGTGCAATTACTCTTATATTAGCTATAATTTG CAGAAACAAAGTGAATATATTTTCGTAGTTGATTCAGTCTATTTCCACAGGATCAGAATTTGTG AATGTAATCGTTCTATTTGTGCTTTTATGCAGGTACCGTCTTAATGTTGAGAAGGCAGAATGGA TAATATACGTAACAGATGTTGGACAGCAGCAGCACTTTGACATGTTCTTTAATGTAAGAATGCG CCCTTTGTCTTCATAACATGTTACATAATCTTGGTGCAAGCAATTCTTATCAGATAATCAATTA GATATATTATTTCATTTCCCTTTGCTAAAACTTTTGTTGTGTTAACAGGCTGCCAGAATGGCTG GCTGGCTTCCAGATCCAAAAGAAAAGAAATATCCAAAAACGAATCATGTTGGGTTTGGTCTTGT TCTTGGATCAGATGGCAAGCGTTTCCGAACTCGTAGTACCGAAGTTGTTCGATTGATAGAGCTA CTTGATGAGGCTAAATCTCGGAGTAAATCAGAACTTCTCCAGCGACTAACAGAAAATGGTAAAC GGTCATTATTTTCTAGTTTCTCTCTCTTTTGTTTGCCTGAGGTAAAATATGTTCATGAATTTAT TTAGGTAAAATTGTTGATTGGACTGAGGAGGAACTGGAAAAGACTTCAGAAGCAGTAGGATATG GCGCTGTCAAGTATGTACAAGATTTCTTCTTTCAGGAAGACAAATATGTTGAACTGAAATATGA TAACAAAGCTTTTTAAATGCTTATCCAATTAGTACTCTTATGTTTTTCTGCCTGATAAACACAG GTATGCAGATCTGAAGAACAATCGTCTTACCAATTACACATTTAGCTTTGAACAAATGCTGAGT GATAAGGTATTTCTAGACTCCACTATTTGTTTACTTGTATAAAAGGGTGTTTTTCTCCATTAAT TTTATTTGTGTTAAAACTTTTATGCGCCACATATTTGCTTATGATGTATTCCAGTATTTGTGGA AGGATCTGTTGCTCTATGTTCTGCATTGGATATTGAAAATCACAGTCTATAGTGGTCGCTCTTT TGCATAAATGAAAAAATATGTTCTTGAGTAGTTTCTGGGCAGATTCTTTATATTAGTAAGTAGT TGGTGAACCCATTCACCTTCTTGCTTACTCTCATTACTTGTTATTGACAAGCTCATTCCTTTTT GTCACCAGGGAAATACAGCTGTTTACCTTCAGTATGCTCATGCTCGCATTTGCTCTATAATCAG GAAATCCAACAAGGATGTAGAAGAGCTGAAAATGGTAATACTTGTGTTATTTCTATGCACTGAT TCTATTGTTGATTTTATAAAGTCCTGCTGTTGTTATTTTAGAGTTCCATCATCTTTTTTTTTTT ACTTGAGTTCCATCATCAATTATTCGTTCTCTTTCAGCTATCAGACATGGATTTAAACACGTTG ACTCTGTTTTCCTGTTTTTCTTCTCAGAGTGGTGCCATTTCTCTTGATCATCCAGATGAGCGTG TCTTGGGACTGTACCTGATCCGATTTGCAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.114894512

Conservation Information
Conserved circRNAs	NA
PMCS	0.114894512

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							3692619-3696480(+)
3692627-3696437(-)
						
					

						Potential amino acid sequence
						
							MLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWN
KICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAKVIFIEGHQIPL
IVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKY
PKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEK
TSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKM
SGAISLDHPDERVLGLYLIRFAEFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDA
EFKDRAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEE
LNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQ
QQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSR
SKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAV
YLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAEFGMLIQYLFEKFPNWE
EIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVY
KLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYAST
DLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGS
DGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYAD
LKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVL
GLYLIRFAEFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQ
GGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAK
VIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMA
GWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGK
IVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIR
KSNKDVEELKMSGAISLDHPDERVLGLYLIRFAE(+)
MSIPNSANRIRYSPKTRSSG*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	3692619-3696480(+) 3692627-3696437(-)
Potential amino acid sequence	MLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWN KICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAKVIFIEGHQIPL IVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKY PKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEK TSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKM SGAISLDHPDERVLGLYLIRFAEFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDA EFKDRAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEE LNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQ QQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSR SKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAV YLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAEFGMLIQYLFEKFPNWE EIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVY KLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYAST DLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGS DGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYAD LKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVL GLYLIRFAEFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQ GGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAK VIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMA GWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGK IVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIR KSNKDVEELKMSGAISLDHPDERVLGLYLIRFAE(+) MSIPNSANRIRYSPKTRSSG*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os05g0163000_circ_g.2

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