Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0580400_circ_g.2 |
ID in PlantcircBase | osa_circ_008210 |
Alias | Os10circ11054 |
Organism | Oryza sativa |
Position | chr10: 23157578-23158422 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os10g0580400 |
Parent gene annotation |
High-affinity urea transporter, Effective urea acquisition and u tilisation, Effective use of low external urea as a N source (Os 10t0580400-01) |
Parent gene strand | + |
Alternative splicing | Os10g0580400_circ_g.1 Os10g0580400_circ_g.3 |
Support reads | 3 |
Tissues | leaf and panicle |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os10t0580400-01:2 |
Conservation Information | |
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Conserved circRNAs | osi_circ_008334 |
PMCS | 0.299928501 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |